Mus musculus (house mouse): 238799
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Entry
238799 CDS
T01002
Symbol
Tnpo1, D13Ertd688e, IPO2, Kpnb2, MIP, MIP1, TRN
Name
(RefSeq) transportin 1
KO
K18752
transportin-1
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
238799 (Tnpo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmu03019
]
238799 (Tnpo1)
03009 Ribosome biogenesis [BR:
mmu03009
]
238799 (Tnpo1)
Messenger RNA biogenesis [BR:
mmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
238799 (Tnpo1)
Ribosome biogenesis [BR:
mmu03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
238799 (Tnpo1)
Pre-60S particles
238799 (Tnpo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_2
Arm
Vac14_Fab1_bd
IBN_N
Cnd1
PDS5
Adaptin_N
MMS19_C
CEP104-like_TOG
UNC45-central
Dopey_N
SCD
RTP1_C1
DUF3689
Motif
Other DBs
NCBI-GeneID:
238799
NCBI-ProteinID:
NP_848831
MGI:
2681523
Ensembl:
ENSMUSG00000009470
UniProt:
Q8BFY9
LinkDB
All DBs
Position
13:complement(98975527..99062851)
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AA seq
898 aa
AA seq
DB search
MVWDRQTKMEYEWKPDEQGLQQILQLLKESQSPDTTIQRTVQQKLEQLNQYPDFNNYLIF
VLTKLKSEDEPTRSLSGLILKNNVKAHFQNFPNGVTDFIKSECLNNIGDSSPLIRATVGI
LITTIASKGELQNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDVLDRPL
NIMIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDSFIENLFALAGDEEAEVR
KNVCRALVMLLEVRMDRLLPHMHNIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDV
LVRHLPKLIPVLVNGMKYSDIDIILLKGDVEEDETIPDSEQDIRPRFHRSRTVAQQHEED
GIEEEDDDDDEIDDDDTISDWNLRKCSAAALDVLANVYRDELLPHILPLLKELLFHHEWV
VKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQ
PPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSK
YQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSS
VATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLNNAQPEQYEAPDKDFMIVALDLLSGLA
EGLGGNIEQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPI
LGTNLNPEFISVCNNATWAIGEISIQMGIEMQPYIPMVLHQLVEIINRPNTPKTLLENTA
ITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPSGVIQDF
IFFCDAVASWINPKDDLRDMFCKILHGFKNQVGDENWRRFSDQFPLPLKERLAAFYGV
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggtgtgggaccggcaaaccaagatggagtatgagtggaaacctgacgagcaagggctt
cagcagatcctgcagctgctcaaggagtcccagtccccagacaccaccatccagaggacc
gtgcaacaaaaactggaacaactcaatcaatatccagattttaacaactacttgattttt
gttcttacaaaattaaaatctgaagatgagcccacacggtcattgagcggtctgatcttg
aagaacaatgtgaaagctcattttcagaacttcccaaatggtgtgacagacttcatcaag
agtgaatgtctaaataacattggggactcctctccgttgatcagagccactgtcggtatt
ttaattacaaccatagcctccaagggagagctgcagaattggcctgatctcttaccaaaa
ctctgtagcctgctggattccgaagactacaacacttgtgagggagccttcggtgccctt
cagaagatatgtgaggactctgcagagattttagacagtgatgtcttagatcgccctctc
aacatcatgatccccaagtttttacagtttttcaagcacagcagtcccaaaataaggtct
catgctgttgcatgtgtcaatcagttcatcatcagtcggacccaggcgctcatgctgcac
atcgattccttcattgagaacctctttgcactggctggcgacgaggaagcagaggtgcgg
aagaacgtgtgccgggcgcttgtgatgttgcttgaagtccggatggatcgcctgcttcct
catatgcacaacatagtcgagtacatgctgcagagaacccaagaccaagatgagaatgta
gctctggaggcctgtgaattctggctgactttggctgaacagccaatatgcaaagatgta
cttgtaaggcatctaccaaagttgattcctgtgttagtgaatggcatgaagtactcagat
atagatattatcctgcttaagggtgatgttgaggaagatgagaccatcccggatagtgag
caggatatacggccgcggtttcatcgctcgaggacagtggctcagcagcatgaggaggat
gggattgaggaggaagacgatgatgatgacgaaattgatgatgatgacacgatttctgac
tggaacctgagaaagtgttctgctgctgctctcgatgttctcgcaaatgtttatcgtgat
gagcttttgccgcacattctgccacttttgaaagaattgcttttccatcatgaatgggtt
gtgaaagaatctggcatcttggttttaggagcaattgctgaaggttgtatgcaaggcatg
attccgtacctgcccgagctcattcctcaccttattcagtgcctttctgataaaaaggct
cttgtgcgttccatcacctgctggactcttagccgctatgcacactgggtagtcagccag
ccaccagatacgtacctgaagccattaatgacagaactgctgaagcgtatcctcgatagc
aacaagagagtacaggaagcagcttgcagtgccttcgctacattagaagaggaggcttgt
acagagctcgtcccttaccttgcttatatactcgataccctcgtcttcgccttcagtaaa
taccagcataagaacctgctcattctgtacgacgccatagggacactggcagattcagtg
ggacatcatttaaacaagccagaatatattcagatgctaatgcctcctttgatccagaaa
tggaacatgctgaaggatgaagacaaggatcttttccctttgcttgagtgtctctcgtct
gttgccacagccttgcagtctggcttccttccatattgtgaacctgtatatcagcgttgc
gtaaacctagttcagaagactctggcacaagccatgctaaacaatgctcaaccagaacag
tatgaagctccagataaagattttatgattgtggctcttgacttactcagcggcctggct
gagggcctgggaggcaacattgagcagctggtggcccgcagtaacatcctgacgctgatg
taccagtgcatgcaggataaaatgcccgaggttcggcagagttcttttgcattgctaggt
gacctgactaaagcgtgcttccagcatgttaagccttgtatagctgatttcatgccaata
ttgggaaccaatctaaatccagagtttatttcagtctgcaacaatgccacctgggcgatt
ggggaaatatcaatccaaatgggtatagagatgcagccctacatccctatggtgttgcac
cagcttgtggagatcattaacagacccaacaccccaaagacgctgttggagaacacagca
ataacaattggtcgtcttggttacgtttgtcctcaagaggtggcccccatgctacagcag
tttataagaccctggtgtacctctctgagaaacataagagacaatgaagaaaaagattca
gcattccgtgggatttgtaccatgatcagtgtgaatcccagtggcgtaatccaagatttt
atatttttttgtgatgctgttgcatcatggattaacccaaaagatgatctcagagacatg
ttctgtaagatccttcatggatttaaaaaccaagttggggatgaaaattggaggcgattc
tctgaccagtttcctcttcccttaaaagagcgtcttgcagctttttatggtgtttaa
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