Mus musculus (house mouse): 239618
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Entry
239618 CDS
T01002
Symbol
Pdzrn4, 1110017D07Rik, LNX4, SAMCAP3L, mKIAA3027
Name
(RefSeq) PDZ domain containing RING finger 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
mmu
Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmu04121
]
239618 (Pdzrn4)
Enzymes [BR:
mmu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
239618 (Pdzrn4)
Ubiquitin system [BR:
mmu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
239618 (Pdzrn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-rbx1
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
239618
NCBI-ProteinID:
NP_001158065
MGI:
3056996
Ensembl:
ENSMUSG00000036218
UniProt:
B9EKP7
E9PUZ9
Q3UXJ7
LinkDB
All DBs
Position
15:92294691..92669700
Genome browser
AA seq
1014 aa
AA seq
DB search
MGFALERLAEAVDPAFQCQLLCGQVLEEPACTPCGHVFCASCLLPWAAGRRWCPLQCQPL
APGELYRVLPLRSLVQQLRVQCNYSGQGCGHRGDCGCWQCTSSAAPSALPAAVTATAQAA
AEAAGRKSTRRPRPAGVGTRVRGHPDLEVGLWLSPAVGVGKTRRAQVSLLQRRYQEKLAL
YMAHTRNFVGNPGGRGQDGEQKPFTVVLEREDDTLGFNIIGGRPYQNSQKQSAPEGIYVS
KILENGPADRADGLEVHDKIIAVNGRDLSKATHEEAVEAFRTAKEPIVVQVLRRTPLSRP
TYGMTPEVQLTNASTQTDITFEHIMALAKLRPLTPPVPDTCPFLLSDSCHSLHPMEHGFY
EDHEYVSSLPADADRADDFEYEEVELCRVSSQEKLGLTVCYRTDDEEDTGIYVSEVDPNS
IAAKDGRIREGDRILQINGEDIQNREEAVALLSSDECKRIVLLIARPDMQLDEGWLEDER
NEFLEELNSELLEEDHNEGAQRTASELQQPKKQEEEEGTTDTATSSSNNQEKDSGVGRTD
ESLRNDESSEQENAVEEPHSTTLKSKRELGKSQDTLGSLEHQCSESCAGGECLDSDCASN
QEVCEGFQQLLELKIRNHGDYDLYYSSSTIECNRGEQDGVEHELQLLNEELRNIELECQN
IMQAHRLQKVTDQYGDIWALHDGGFRNYNTSLDVQRGKLDDIMEHPEKSDKDSSSAYNTA
ESCRSTPLTVDRSPDSSLPRMINLTNKKNLRSMMTAHQSPPRQSTREYTSTKVKATDEGC
SVESLEKGLESSQLLDQEHTVSEHPPYLSPYHSSSYRYANIPAHARHYQSYMQLIQQKSA
VEYAQSQLSLVSMCKESQRGSEPKMEWKVKIRSDGTRYITKRPVRDRLLKERALKIKEER
SGMTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLESLKESPQSSGEGK
KELSIIELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRVHNAFLSVTTV
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgctttggagcgtctcgcggaagccgtggaccccgctttccagtgccagcta
ctgtgtggccaggtactggaggagcccgcgtgcacgccttgcgggcacgtcttctgcgcc
agctgcctgctgccctgggcggcggggagacgctggtgcccgctgcagtgccagccgctg
gcgccgggcgagctgtaccgggtgctgccgctgcgcagcctggtccagcaactgcgcgtg
cagtgcaactacagcggacagggctgtggccacaggggcgactgcgggtgctggcagtgc
acatccagcgctgcgccttcggccctgccagcggctgtgacagccactgcccaggcggct
gcggaggcggcggggaggaaaagcacccggcgaccaagacctgctggagtggggacgcgc
gtgaggggccacccggacctggaggtcggcctctggttgtcgcctgctgtcggggtgggg
aagacgcggcgggcgcaggtcagcttgttgcagcgcaggtatcaggagaagttggctctg
tacatggcgcacacgcgcaacttcgtcgggaacccgggaggccgcggccaggatggagag
cagaagccgttcactgttgtgttggaaagagaagatgacactttgggattcaacataata
ggaggccgcccatatcagaattcccagaagcaatcagcgcctgaaggaatttatgtctca
aaaattttagaaaacggacctgcagaccgagcagatggcctggaggttcatgacaaaatc
attgcggtcaatggcagggatctctcaaaggccactcatgaagaggcagtggaagctttt
cgaactgccaaggagcccatagtggtacaggtgttaaggcggactcccctcagccggcca
acatacggcatgactccggaagtacagctcacgaatgccagcacacagacggacatcact
tttgaacacatcatggccctggcgaagcttcggccactcacccctccggtgcctgacacc
tgtccatttttgctttcagacagctgccactcccttcatccgatggagcatgggttttat
gaagaccatgagtacgtctccagcttgcccgctgatgcagacagagcagatgactttgaa
tatgaggaggtcgagctgtgtcgtgttagcagtcaagagaagctgggcctgacagtctgc
taccgaaccgatgatgaagaagacacgggcatttatgtcagcgaggttgacccaaatagc
attgctgccaaggatggccggattcgagaaggggatcgtattttacaaataaatggggaa
gacatccaaaaccgggaagaggccgtggctctgctctccagcgatgagtgtaagagaatc
gtgctgctcatcgccaggcccgacatgcagctggatgaaggctggctggaagatgaaagg
aacgaattcttagaggagttaaactcagagctgctggaggaagaccataatgaaggagca
cagcgcacagcctctgagctgcagcagccaaaaaaacaggaggaagaagaaggcacaaca
gacacggccacctcctcttccaacaaccaggagaaggacagtggcgtggggcgcacggat
gagagcttgcggaatgatgagagctcagagcaggagaacgcagtggaggagccccacagc
accaccctgaagagcaagagagagctggggaagagccaagacacgctagggagccttgag
catcaatgcagtgagagttgtgctgggggtgagtgcttagactccgactgtgccagcaac
caggaggtgtgtgaaggcttccagcagctgttggagcttaagattcgaaaccacggagat
tacgacctgtactactcaagcagtaccatcgagtgcaatcgaggggaacaggatggggtg
gagcacgagctgcagctgcttaacgaggagctgcgaaacattgagctagagtgccagaac
atcatgcaggcccacaggctccagaaagtgacggaccaatacggagacatctgggcattg
catgatgggggattccgaaattacaacaccagcctggatgtgcaacgggggaaactggat
gacatcatggaacacccagaaaagtcagacaaggacagctcgagtgcgtacaatacggca
gagagctgcagaagcactccgctgactgtagacaggtccccggacagttcccttccaaga
atgatcaacctcaccaataagaaaaatctgagaagcatgatgacagcccatcagtcccct
cccagacagagcaccagggaatacacatctaccaaagtcaaagccaccgatgaaggttgc
agcgtcgaaagcctggagaagggtctagaaagcagccagcttctggaccaggagcacaca
gtcagtgagcatcctccatacctctctccttatcacagctcctcctacagatatgccaac
attccggcgcatgcccggcattatcaaagctacatgcagttaattcaacagaaatcggct
gtggagtatgcccagagtcagctcagcttggtgagcatgtgcaaggaatcacaaaggggc
tcggagcccaagatggaatggaaggtaaaaattaggagtgatgggacccggtacatcacc
aagaggccagtgagagaccgacttctgaaggaacgtgccttaaagatcaaggaggagcgg
agtggcatgaccacagacgacgacaccatgagtgagatgaaaatggggcgctactggagc
aaggaggagagaaagcaacacctggtccgggccaaggagcaaaggcggcgccgggagttc
atgatgcggagtcggctggagagcctcaaagagagcccacagagcagcggcgaaggcaag
aaggagctgagcatcatcgaactgagccacaaaaagatgatgaaaaaaagaaacaagaaa
attttggataactggatgacaatccaagaactgatgactcatggggccaaatccccagat
ggcactagggtccataatgcctttctgtcggtgaccaccgtatga
DBGET
integrated database retrieval system
