Mus musculus (house mouse): 240057
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Entry
240057 CDS
T01002
Symbol
Syngap1, Gm1963, Syngap
Name
(RefSeq) synaptic Ras GTPase activating protein 1 homolog (rat)
KO
K17631
Ras/Rap GTPase-activating protein SynGAP
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu04014
Ras signaling pathway
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
240057 (Syngap1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DAB2P_C
RasGAP
C2
PH
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
240057
NCBI-ProteinID:
NP_001268420
MGI:
3039785
Ensembl:
ENSMUSG00000067629
UniProt:
F6SEU4
Structure
PDB
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Position
17:27160186..27191408
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AA seq
1340 aa
AA seq
DB search
MSRSRASIHRGSIPAMSYAPFRDVRGPPMHRTQYVHSPYDRPGWNPRFCIISGNQLLMLD
EDEIHPLLIRDRRSESSRNKLLRRTVSVPVEGRPHGEHEYHLGRSRRKSVPGGKQYSMEA
APAAPFRPSQGFLSRRLKSSIKRTKSQPKLDRTSSFRQILPRFRSADHDRARLMQSFKES
HSHESLLSPSSAAEALELNLDEDSIIKPVHSSILGQEFCFEVTTSSGTKCFACRSAAERD
KWIENLQRAVKPNKDNSRRVDNVLKLWIIEARELPPKKRYYCELCLDDMLYARTTSKPRS
ASGDTVFWGEHFEFNNLPAVRALRLHLYRDSDKKRKKDKAGYVGLVTVPVATLAGRHFTE
QWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLKARYQTMSILPMELYKEF
AEYVTNHYRMLCAVLEPALNVKGKEEVASALVHILQSTGKAKDFLSDMAMSEVDRFMERE
HLIFRENTLATKAIEEYMRLIGQKYLKDAIGEFIRALYESEENCEVDPIKCTASSLAEHQ
ANLRMCCELALCKVVNSHCVFPRELKEVFASWRLRCAERGREDIADRLISASLFLRFLCP
AIMSPSLFGLMQEYPDEQTSRTLTLIAKVIQNLANFSKFTSKEDFLGFMNEFLELEWGSM
QQFLYEISNLDTLTNSSSFEGYIDLGRELSTLHALLWEVLPQLSKEALLKLGPLPRLLND
ISTALRNPNIQRQPSRQSERTRSQPMVLRGPSAEMQGYMMRDLNSSIDLQSFMARGLNSS
MDMARLPSPTKEKPPPPPPGGGKDLFYVSRPPLARSSPAYCTSSSDITEPEQKMLSVNKS
VSMLDLQGDGPGGRLNSSSVSNLAAVGDLLHSSQASLTAALGLRPAPAGRLSQGSGSSIT
AAGMRLSQMGVTTDGVPAQQLRIPLSFQNPLFHMAADGPGPPAGHGGSSGHGPPSSHHHH
HHHHHHRGGEPPGDTFAPFHGYSKSEDLSSGVPKPPAASILHSHSYSDEFGPSGTDFTRR
QLSLQDSLQHMLSPPQITIGPQRPAPSGPGGGSGGGSGGGQPPPLQRGKSQQLTVSAAQK
PRPSSGNLLQSPEPSYGPARPRQQSLSKEGSIGGSGGSGGGGGGGLKPSITKQHSQTPST
LNPTMPASERTVAWVSNMPHLSADIESAHIEREEYKLKEYSKSMDESRLDRVKEYEEEIH
SLKERLHMSNRKLEEYERRLLSQEEQTSKILMQYQARLEQSEKRLRQQQVEKDSQIKSII
GRLMLVEEELRRDHPAMAEPLPEPKKRLLDAQERQLPPLGPTNPRVTLAPPWNGLAPPAP
PPPPRLQITENGEFRNTADH
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggtctcgagcctccatccatcgggggagcatccccgcgatgtcctatgccccc
ttcagagatgtacggggaccccctatgcaccgaacccaatacgttcattccccgtacgat
cgtcctggctggaaccctcggttctgcatcatctcggggaaccagctgctcatgctggat
gaggatgagatacacccccttctgatccgcgaccggaggagcgagtccagccgaaacaaa
ctgctgagacgcaccgtctctgtgccagtggaggggcggccccacggcgagcatgaatac
cacttgggtcgctcgaggaggaagagtgtcccaggggggaaacagtacagcatggaggcc
gcccccgctgcgcccttccggccctcgcaaggcttcctgagccggaggctaaaaagctct
atcaaacgtacaaagtcacaacccaaacttgaccggaccagcagctttcgacagatcctg
cctcgcttccgaagtgctgaccatgaccgggcccggctgatgcagagcttcaaggagtca
cattcccacgagtccctgctgagtcccagtagtgctgctgaggccttggagctcaacctg
gatgaagactccattatcaagccagtacacagctccatcctgggtcaggagttctgcttt
gaggtaacaacatcatctggaacaaaatgctttgcctgtcggtctgcagctgaaagggac
aaatggattgagaatctgcagagggctgtaaaacccaacaaggacaacagccgccgagta
gataacgtgctgaagctatggatcatagaggctcgagagctgccccccaagaagagatat
tactgtgagctgtgcctggacgacatgctgtatgcacgaaccacctccaagccccgctcg
gcttcaggagacaccgtcttttggggcgagcactttgagtttaacaacctgcctgccgtc
cgggcccttcggctgcatctgtaccgtgactcagacaaaaagcggaagaaggacaaggct
ggctacgttggcctggtgactgttccagtggccaccctagctgggcgccacttcacagag
cagtggtaccccgtgaccttgccgacaggcagtgggggctctgggggcatgggctcgggg
ggaggaggagggtcagggggtggctcagggggcaaagggaaaggaggttgtcctgctgtg
agactgaaagcccgttaccagacgatgagcatcctgcccatggagctgtataaggagttt
gcagagtatgtgaccaaccattaccggatgctatgtgcagtgctggagcctgccctgaat
gtcaaaggcaaggaagaggtggccagtgcactggttcacatcctgcagagcacaggcaag
gccaaggacttcctttcagacatggccatgtcagaggtagaccgattcatggagcgggaa
cacctcatattccgagagaacacgctcgccactaaagccatagaagagtatatgagactg
attggccagaaatacctcaaggatgccattggggagttcattcgtgctctgtatgaatct
gaggagaactgtgaagtagaccccatcaagtgcacagcgtccagtctggcagagcaccag
gccaacctgcggatgtgctgtgagttggccctgtgcaaggtggtcaactcccattgcgtg
ttcccgagggagctgaaggaggtgtttgcatcttggcggctgcgctgcgcagagcggggc
cgagaggacattgctgacaggctgatcagcgcctcgctcttcctgcgcttcctctgcccg
gccattatgtcgcccagtctatttgggcttatgcaggagtacccagatgagcagacctca
cgaaccctcaccctcatcgccaaggtcatccagaacctggccaacttttccaagtttacc
tcaaaggaggacttcctgggcttcatgaatgagtttctggagctggagtggggctctatg
cagcagttcttgtatgagatatccaacctggacaccttgaccaacagcagcagttttgag
ggctatatagacttgggccgcgagctctccacacttcacgccctgctctgggaggtgctg
ccccagctcagcaaggaagccctcctgaagctgggcccactgccccggctcctcaatgac
atcagcacagccctgaggaaccctaacatccaaaggcagccaagccgccagagtgaacgg
actcggtctcagcccatggtgctgcgagggccatcagccgagatgcagggctacatgatg
cgggacctcaatagctccatcgaccttcaatccttcatggctcgaggcctcaacagctct
atggacatggctcgcctcccctccccaaccaaggaaaaaccaccaccaccaccacccggt
gggggtaaagaccttttctatgtgagccggccaccactggcccggtcctccccagcatac
tgcacgagcagctcggacatcacagagccagagcagaagatgctgagtgtcaacaagagt
gtgtccatgctggaccttcagggcgacgggcctggaggtcgccttaacagtagcagtgtt
tccaacctggcagctgttggggacttgttgcattccagccaggcctcgctgacagcagct
ttggggttgcggcctgcacctgccgggcgcctctcccaggggagtggctcttccatcaca
gcagctggcatgcgcctcagccagatgggggtcactacagatggtgtccccgcccagcaa
ctgcgcatccccctttccttccagaaccctctcttccatatggctgctgatgggccaggg
cccccagcaggccatggagggagcagtggtcatggtccaccttcctcccatcaccaccac
caccaccatcaccaccaccgagggggagaacccccaggggacacttttgccccattccat
ggctatagcaagagcgaggacctctcttcaggggtccctaagccccccgccgcctccatc
cttcacagccacagctacagcgacgagtttggaccctctggcactgattttacccgccgg
cagctctcgcttcaggacagtctacagcacatgctctcccctccccagattaccatcggt
ccccagaggccagctccctcagggccgggagggggcagcggcgggggcagcggtgggggc
cagccaccccccttgcagaggggcaagtctcaacagttgacagtgagtgccgcccagaaa
cctcggccgtctagcgggaacctgttgcagtccccggagccaagctacggacctgcccgt
cctcggcagcagagcctcagcaaagagggcagcattgggggcagcgggggcagcgggggc
ggagggggtggggggctcaagccctccatcaccaagcagcattcccagactccatccacg
cttaaccccacaatgccagcctcggagcggaccgtagcctgggtctccaacatgcctcac
ctgtcggctgacatcgagagtgcacacatcgagcgagaagagtacaagctcaaggagtac
tccaagtccatggacgaaagccggctggacagggtgaaggagtatgaggaggagatacat
tcgctgaaggagaggctacacatgtccaaccggaagctggaagagtatgagcggaggttg
ctgtcccaggaagaacagaccagcaagatcctgatgcagtaccaagcccgcctggagcag
agtgagaagcgcttgagacagcagcaggtggagaaggactcccagatcaagagcatcatt
ggcaggctgatgctggtggaggaggagctgcgtcgggaccaccccgccatggctgagccg
ctgcctgagcccaagaagaggctgctcgacgctcaggagaggcagcttccccccttgggt
ccaacaaacccgcgtgtgacgctggccccaccttggaacggcctggcccccccagcccca
ccccccccaccccggctgcagatcacagagaacggcgagttccggaacaccgcagaccac
tag
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