Mus musculus (house mouse): 24046
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Entry
24046 CDS
T01002
Symbol
Scn11a, NSS2, NaN, NaT, NaV1.9, SNS2
Name
(RefSeq) sodium channel, voltage-gated, type XI, alpha
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
mmu
Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mmu04040
]
24046 (Scn11a)
Ion channels [BR:
mmu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
24046 (Scn11a)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
24046
NCBI-ProteinID:
NP_036017
MGI:
1345149
Ensembl:
ENSMUSG00000034115
UniProt:
Q9R053
LinkDB
All DBs
Position
9:complement(119582829..119654522)
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AA seq
1765 aa
AA seq
DB search
MEERYYPVIFPDERNFRPFTFDSLAAIEKRITIQKEKKKSKDKAATEPQPRPQLDLKASR
KLPKLYGDVPPDLIAKPLEDLDPFYKDHKTFMVLNKKRTIYRFSAKRALFILGPFNPIRS
FMIRISVHSVFSMFIICTVIINCMFMANNSSVDSRPSSNIPEYVFIGIYVLEAVIKILAR
GFIVDEFSYLRDPWNWLDFIVIGTAIAPCFLGNKVNNLSTLRTFRVLRALKAISVISGLK
VIVGALLRSVKKLVDVMVLTLFCLSIFALVGQQLFMGILSQKCIKDDCGPNAFSNKDCFV
KENDSEDFIMCGNWLGRRSCPDGSTCNKTTFNPDYNYTNFDSFGWSFLAMFRVMTQDSWE
KLYRQILRTSGIYFVFFFVVVIFLGSFYLLNLTLAVVTMAYEEQNRNVAAETEAKEKMFQ
EAQQLLREEKEALVAMGIDRTSLNSLQASSFSPKKRKFFGSKTRKSFFMRGSKTARASAS
DSEDDASKNPQLLEQTKRLSQNLPVELFDEHVDPLHRQRALSAVSILTITMQEQEKSQEP
CFPCGKNLASKYLVWECSPPWLCIKKVLQTIMTDPFTELAITICIIVNTVFLAMEHHNMD
NSLKDILKIGNWVFTGIFIAEMCLKIIALDPYHYFRHGWNIFDSIVALVSLADVLFHKLS
KNLSFLASLRVLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLTIVVFIFSVVGMRLF
GAKFNKTCSTSPESLRRWHMGDFYHSFLVVFRILCGEWIENMWECMQEMEGSPLCVIVFV
LIMVVGKLVVLNLFIALLLNSFSNEEKDGNPEGETRKTKVQLALDRFSRAFYFMARALQN
FCCKRCRRQNSPKPNEATESFAGESRDTATLDTRSWKEYDSEMTLYTGQAGAPLAPLAKE
EDDMECCGECDASPTSQPSEEAQACDLPLKTKRLPSPDDHGVEMEVFSEEDPNLTIQSAR
KKSDAASMLSECSTIDLNDIFRNLQKTVSPQKQPDRCFPKGLSCIFLCCKTIKKKSPWVL
WWNLRKTCYQIVKHSWFESFIIFVILLSSGALIFEDVNLPSRPQVEKLLKCTDNIFTFIF
LLEMILKWVAFGFRKYFTSAWCWLDFLIVVVSGLSLTNLPNLKSFRNLRALRPLRALSQF
EGMKVVVNALMSAIPAILNVLLVCLIFWLIFCILGVNFFSGKFGRCINGTDINKYFNASN
VPNQSQCLVSNYTWKVPNVNFDNVGNAYLALLQVATYKGWLDIMNAAVDSRGKDEQPAFE
ANLYAYLYFVVFIIFGSFFTLNLFIGVIIDNFNQQQKKLGGQDIFMTEEQKKYYNAMKKL
GTKKPQKPIPRPLNKCQAFVFDLVTSQVFDVIILGLIVTNMIIMMAESEGQPNEVKKIFD
ILNIVFVVIFTVECLIKVFALRQHYFTNGWNLFDCVVVVLSIISTLVSGLENSNVFPPTL
FRIVRLARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLVMFIYAIFGMNWFSK
VKRGSGIDDIFNFDTFSGSMLCLFQITTSAGWDALLNPMLESKASCNSSSQESCQQPQIA
IVYFVSYIIISFLIVVNMYIAVILENFNTATEESEDPLGEDDFEIFYEIWEKFDPEATQF
IQYSSLSDFADALPEPLRVAKPNRFQFLMMDLPMVMGDRLHCMDVLFAFTTRVLGNSSGL
DTMKAMMEEKFMEANPFKKLYEPIVTTTKRKEEEECAAVIQRAYRRHMEKMIKLKLKGRS
SSSLQVFCNGDLSSLDVPKIKVHCD
NT seq
5298 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaggtactatccagtgatcttcccagacgagaggaatttccgccccttcact
ttcgactctttggctgcaatagagaagcggatcaccatccaaaaggagaagaagaaatcc
aaagacaaggcagcaactgagccccagcctcggcctcagctcgacctaaaggcctccagg
aagttacctaagctctatggcgacgttccccctgaccttatagcgaagcccctggaagat
ctggacccattttacaaagaccataagacattcatggtattgaacaagaagagaacaatc
tatcgcttcagcgccaagagggccttgttcattctggggccttttaatcccatcagaagc
ttcatgattcgcatctctgtccattcagtcttcagcatgttcattatctgcacagtgatc
atcaactgtatgttcatggctaataattcttctgtggacagtcgtcctagcagtaacatt
cccgaatacgtcttcattgggatttatgttttagaagctgtgattaaaatattggcaaga
ggcttcattgtggatgagttttcctacctccgagatccttggaactggctggacttcatt
gtcatcggaacagcgatagcgccttgttttctcggtaacaaagtcaataatctttccact
ctacgtaccttccgagtgttgagagctctgaaagccatttctgtaatctcaggtctgaag
gtcatcgtgggtgccctgctgcgctccgtgaagaagctagtggacgtgatggtcctcact
ctcttttgcctcagcatctttgccctggttggtcagcagctcttcatgggaattctgagc
cagaaatgtattaaggacgactgtggccctaacgctttttccaacaaggattgctttgta
aaagaaaatgatagcgaggacttcataatgtgtggcaactggctcggcagaagatcctgc
cccgatggttccacgtgcaataaaaccacatttaacccagattataattatacaaacttt
gacagctttggctggtcttttctcgccatgttccgggttatgactcaagactcctgggag
aagctttatcgacagatccttcgcacctccgggatctactttgtcttcttcttcgtggtc
gtcatcttcctgggctctttctacctgcttaacttaaccctggctgtcgtcaccatggct
tacgaggaacagaacagaaatgtcgctgccgagacagaggccaaggagaagatgtttcag
gaagcccagcagctgttgagggaggaaaaggaggctctggttgccatgggaattgacaga
acttcccttaattccctccaagcttcgtccttttccccaaagaagaggaagttttttggc
agtaagacaagaaagtccttctttatgagagggtccaagacagcccgagcctcagcgtcc
gattcagaggacgatgcctctaaaaacccacaactccttgagcaaacaaaacgactatcc
cagaacttgcccgtagaactctttgatgagcacgtggaccccctccataggcagagagcg
ctgagtgccgtcagtatcttaaccatcaccatgcaggaacaagaaaaatcccaggagcct
tgtttcccgtgtgggaaaaacttggcatccaagtacctggtgtgggaatgtagccctccg
tggctgtgcataaagaaggtcctgcagactatcatgacagaccccttcactgagctggcc
atcaccatctgcatcatcgtcaatactgtcttcttggccatggaacaccacaatatggat
aactctttaaaagacatactgaaaataggaaactgggttttcactggaattttcatagcg
gaaatgtgtctcaagatcattgcgctagacccttaccactacttccggcacggctggaac
atctttgacagcattgtggcccttgtgagtctcgctgacgtgctcttccacaaactgtct
aaaaacctctccttcttggcttccctcagagtgctgagggtcttcaagttagccaaatcc
tggcccacattaaacactctcattaagatcatcggccactccgtgggtgcgctcggaaac
ctgactgtggtcctaacgatcgtggtcttcatcttttccgtggttggcatgcggctcttt
ggtgccaagtttaacaagacttgctccacctctccggagtccctccggcgctggcacatg
ggtgatttctaccattccttcctggtggtgttccgcatcctctgtggggagtggatcgag
aacatgtgggaatgcatgcaggagatggaaggctccccgctgtgtgtcatcgtctttgtg
ctgatcatggtggtcgggaagctcgtggtgcttaacctcttcattgccttgctgctcaat
tccttcagcaatgaggaaaaggatgggaacccagaaggagagaccaggaaaaccaaagtg
cagctagccctggatcggttcagccgagcgttctacttcatggcgcgcgctcttcagaat
ttctgttgcaagagatgcaggaggcaaaactcgccaaagccaaatgaggcaacagaaagc
tttgctggtgagagtagagacacagccaccctggatacaaggtcctggaaggagtatgat
tcagaaatgactctgtacactgggcaggccggggctccactggccccactggcaaaagaa
gaggacgatatggaatgttgtggtgaatgtgatgcctcacctacctcacagcctagtgag
gaagctcaggcctgtgacctccctctgaagaccaagcggctccccagcccagatgaccac
ggggttgaaatggaagtgttttccgaagaagatccgaatttaaccatacagagtgctcga
aagaagtctgatgcggcaagcatgctctcagaatgcagcacaatagacctgaatgatatc
tttagaaatttacagaaaacagtttccccccaaaagcaaccagatcgatgctttcccaag
ggcctcagttgtatctttctatgttgcaaaacaatcaaaaaaaagtccccctgggtcctg
tggtggaatcttcggaaaacctgctaccaaatcgtgaagcatagctggtttgagagcttc
ataatttttgtcatcctgctgagcagcggagcactgatattcgaagatgtcaatcttccc
agccggccccaagttgaaaaattactgaagtgtaccgataatattttcacatttattttt
ctcctggaaatgattttgaagtgggtggcctttggattccggaagtatttcaccagtgcc
tggtgctggctcgatttcctcattgtggtggtgtctgggctcagcctcacgaacttacca
aacttgaagtccttccggaatctgcgagcgctgagacctctgcgggcactgtctcagttt
gaaggaatgaaggttgttgtcaatgccctcatgagtgccatacctgccatcctcaatgtc
ttgctggtctgcctcattttctggctcatattttgtatcctgggagtaaattttttttct
gggaagtttggaagatgcattaatggaacagacataaataaatatttcaacgcttccaat
gttccaaaccaaagccaatgtttagttagtaattacacgtggaaagtcccgaatgtcaac
tttgacaacgtggggaatgcctaccttgccctgctgcaagtggcgacctataagggctgg
ctggacattatgaatgcagctgttgattccagagggaaagatgagcagccggcctttgag
gcgaatctatacgcatacctttacttcgtggtttttatcatcttcggctcattctttacc
ctgaacctctttatcggtgttattattgacaacttcaatcagcagcagaaaaagttaggt
ggccaagacatttttatgacagaagaacagaagaaatattacaatgcaatgaaaaagtta
ggaaccaagaagcctcaaaagcccatcccaaggcccctgaacaaatgtcaagccttcgtg
ttcgatttggtcacaagccaggtctttgacgtcatcattctgggtcttattgtcacaaac
atgattatcatgatggctgaatctgaaggccagcccaacgaagtgaagaaaatctttgat
attctcaacatagtcttcgtggtcatctttaccgtagagtgtctcatcaaagtctttgct
ttgaggcaacactacttcaccaatggctggaacttatttgattgtgtggtcgtggttctt
tccatcattagtaccttggtttctggcttggagaacagcaacgtcttcccgcccacactc
ttcaggattgtccgcttggctcggatcggtcgaatcctcagactggtccgggcggctcga
ggaatcaggacactccttttcgcgttgatgatgtctctcccctctctcttcaacatcggt
ctgcttctctttctggtgatgttcatttatgccatctttgggatgaactggttttccaaa
gtgaagagaggctctgggattgatgacatcttcaactttgacactttctcgggcagcatg
ctctgcctcttccagataaccacttcagccggctgggatgctctcctcaaccccatgctg
gaatcaaaagcctcttgcaattcctcctcccaagagagctgtcagcagccgcagatagcc
atagtctacttcgtcagctacatcatcatctcctttctcattgtggttaacatgtacata
gctgtgattctagagaacttcaacacagccacagaggagagcgaggaccccctgggcgaa
gacgactttgagatcttctatgagatctgggagaagtttgaccccgaagcaacacagttc
atccagtactcatccctctctgacttcgccgacgccctgcccgagccgttgcgtgtggcc
aagcccaacaggtttcagtttctcatgatggacttgcccatggtgatgggtgatcgcctc
cattgcatggatgttctctttgctttcaccaccagggtcctcgggaactccagcggcttg
gataccatgaaagccatgatggaggagaagttcatggaggccaatcctttcaagaagttg
tacgagcccattgtcaccaccacaaagaggaaggaggaggaggaatgtgccgctgtcatc
cagagggcctaccggagacacatggagaagatgatcaagctgaagctgaaaggcaggtca
agttcatcgctccaggtgttttgcaatggagacttgtctagcttggatgtgcccaagatc
aaggttcattgtgactga
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integrated database retrieval system