Mus musculus (house mouse): 24128
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Entry
24128 CDS
T01002
Symbol
Xrn2
Name
(RefSeq) 5'-3' exoribonuclease 2
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03008
Ribosome biogenesis in eukaryotes
mmu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
24128 (Xrn2)
09123 Folding, sorting and degradation
03018 RNA degradation
24128 (Xrn2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmu03021
]
24128 (Xrn2)
03019 Messenger RNA biogenesis [BR:
mmu03019
]
24128 (Xrn2)
03009 Ribosome biogenesis [BR:
mmu03009
]
24128 (Xrn2)
03016 Transfer RNA biogenesis [BR:
mmu03016
]
24128 (Xrn2)
Transcription machinery [BR:
mmu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
24128 (Xrn2)
Messenger RNA biogenesis [BR:
mmu03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
24128 (Xrn2)
Ribosome biogenesis [BR:
mmu03009
]
Eukaryotic type
Pre-60S particles
RNases
24128 (Xrn2)
Transfer RNA biogenesis [BR:
mmu03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
24128 (Xrn2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
24128
NCBI-ProteinID:
NP_036047
MGI:
894687
Ensembl:
ENSMUSG00000027433
UniProt:
Q9DBR1
LinkDB
All DBs
Position
2:146854672..146919922
Genome browser
AA seq
951 aa
AA seq
DB search
MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH
PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR
ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD
RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG
LATHEPNFTIIREEFKPNKPKPCALCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGE
FIFLRLNVLREYLERELTMASLPFPFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAI
DRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKE
KRKRMKRDQPAFTPSGILTPHALGSRNSPGCQVASNPRQAAYEMRMQRNSSPSISPNTSF
ASDGSPSPLGGIKRKAEDSDSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQ
SYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMSSEFEKGTKPFKPLEQLMG
VFPAASGNFLPPTWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRA
ALEEVYPDLTPEENRRNSLGGDVLFVGKLHPLRDFILELYQTGSTEPVDVPPELCHGIQG
TFSLDEEAILPDQTVCSPVPMLRDLTQNTAVSINFKDPQFAEDYVFKAAMLPGARKPATV
LKPGDWEKSSNGRQWKPQLGFNRDRRPVHLDQAAFRTLGHVTPRGSGTSVYTNTALPPAN
YQGNNYRPLLRGQAQIPKLMSNMRPQDSWRGPPPLFQQHRFERSVGAEPLLPWNRMIQNQ
NAAFQPNQYQMLGGPGGYPPRRDDHRGGRQGYPREGRKYPLPPPSGRYSWN
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcccggcgttcttccgctggctcagccgcaagtacccgtccatcattgtcaac
tgcgtggaggagaagccaaaagaatgcaacggtgtaaagattccagttgatgccagtaaa
cctaatccaaatgatgtggagtttgataatctgtatttggatatgaatgggatcatccac
ccctgcactcatcctgaagacaaaccagcaccaaaaaatgaagatgaaatgatggttgca
atttttgagtacattgacagacttttcaatattgtaagaccaagaagacttctctacatg
gcaatagatggggtggcaccacgtgcaaaaatgaatcagcagcgttcaaggaggttcaga
gcatcaaaggaaggaatggaagcagcagttgagaagcagcgagtcagagaggaaatactt
gcaaaaggtggctttcttcctccagaagaaataaaagaaagatttgacagcaactgtatt
accccaggaactgagttcatggacaatcttgctaaatgccttcgctattacatagctgat
cgtttaaataatgaccctgggtggaaaaatttgacagttatattatctgatgctagtgca
cctggtgaaggagaacacaaaatcatggattacattagaagacaaagagcccagcctaac
catgacccaaatactcatcattgtttgtgtggagctgatgctgatctaattatgcttggt
cttgctacacatgaacctaacttcaccataatcagagaagaattcaaaccaaataaacct
aaaccatgtgctctttgtaatcagtttggacacgaggtcaaggattgtgaaggtttgcca
agagaaaagaagggaaagcatgatgaacttgcagatagtcttccttgtgcagaaggggag
tttatcttccttcggctgaatgtccttcgagagtatctggaaagagaactcaccatggcc
agcttaccattcccatttgatgtggagaggagcattgatgactgggtgttcatgtgcttc
tttgtggggaatgatttccttcctcacttgccatcactagagattagggaaggtgcaatt
gatcgtttggttaacatatacaaaaacgtggtacacaaaactgggggttaccttacagaa
agtggttatgtcaatctgcaaagagtacagatgatcatgttagcagttggtgaagttgag
gatagcatttttaaaaagagaaaagatgatgaggacagttttagaagacgacagaaagaa
aaaagaaagaggatgaagagagatcaaccagcttttactcctagtggaatattaacacct
catgccttgggttcaagaaattcaccaggttgtcaagtagccagtaatccaagacaagca
gcctatgaaatgaggatgcagagaaactctagtccttcaatatctcctaatacaagtttt
gcatctgatggctccccatctccactaggaggaattaagagaaaagcagaagacagtgac
agtgagccagagccagaggataacgtcaggttatgggaagctggttggaagcaacgatac
tacaagaacaaatttgatgtagatgcagctgatgagaaattccgacgtaaggttgttcag
tcctacgttgaaggactgtgctgggttcttcgctattattaccagggctgtgcttcctgg
aagtggtattatccattccattatgcaccatttgcctcagactttgaaggtattgcagac
atgtcctctgaatttgaaaagggcacaaaaccgtttaagccactggaacaactaatgggg
gttttcccagctgcaagtggtaactttctacctccaacatggcggaagctcatgagtgac
cctgattccagtataattgacttctatcctgaagattttgctattgatttgaatgggaag
aaatatgcatggcaaggtgttgctctattgccatttgtggatgagcgaaggctgcgagcg
gctctagaagaggtgtacccagacctcactccagaagagaacaggagaaatagtcttgga
ggtgatgttttgtttgtgggaaaacttcatccactacgcgacttcattttagagctgtat
cagacgggttccacagagccagttgatgtgccacctgaattgtgtcacgggattcaaggg
acgttttctttggatgaagaagccattcttccagaccaaacagtatgttcccctgtgccc
atgttgcgggacctgacacagaacactgcagtcagtattaattttaaagatccacagttt
gctgaagattatgtttttaaagctgcaatgcttccaggagcaagaaagccagcaacagtt
ctgaaacctggtgactgggaaaaatccagcaatgggcggcaatggaaacctcagcttggc
tttaaccgggaccggcggcctgttcacctggaccaggcagcctttagaactttaggccat
gttacaccaagaggctcggggacgagtgtttatacgaacactgcactaccacctgccaat
taccaggggaacaattacaggccactgctgagaggtcaagctcagatcccaaaacttatg
tcaaatatgaggccccaagattcctggcgaggccctcctcctcttttccagcagcataga
tttgagagaagtgttggagctgaacctctactgccatggaaccggatgatccaaaaccaa
aatgcagcctttcagccaaatcagtaccagatgctaggaggacctggaggctatccaccc
agacgtgacgatcaccgaggagggagacagggatatcccagagaaggacggaaataccct
ttgccaccaccctcgggaagatacagttggaattag
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