Mus musculus (house mouse): 242557
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Entry
242557 CDS
T01002
Symbol
Atg4c, Apg4-C, Apg4c, Atg4cl, Autl1
Name
(RefSeq) autophagy related 4C, cysteine peptidase
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu04136
Autophagy - other
mmu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
242557 (Atg4c)
04136 Autophagy - other
242557 (Atg4c)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mmu01002
]
242557 (Atg4c)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmu04131
]
242557 (Atg4c)
03029 Mitochondrial biogenesis [BR:
mmu03029
]
242557 (Atg4c)
Peptidases and inhibitors [BR:
mmu01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
242557 (Atg4c)
Membrane trafficking [BR:
mmu04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
242557 (Atg4c)
Mitochondrial biogenesis [BR:
mmu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
242557 (Atg4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
242557
NCBI-ProteinID:
NP_001139439
MGI:
2651854
Ensembl:
ENSMUSG00000028550
UniProt:
Q811C2
Q3UYA5
LinkDB
All DBs
Position
4:99077181..99185495
Genome browser
AA seq
458 aa
AA seq
DB search
MEASGTDEVDKLKTKFISAWNNMKYSWVLKTKTYFSRNSPVLLLGKCYHFKYEDESKMLP
ARSGCAIEDHVIAGNVEEFRKDFISRIWLTYREEFPQIEASALTTDCGWGCTLRTGQMLL
AQGLILHFLGRAWTWPDALHIENADSDSWTSNTVKKFTASFEASLSGDRELRTPAVSLKE
TSGKCPDDHAVRNEAYHRKIISWFGDSPVAVFGLHRLIEFGKKSGKKAGDWYGPAVVAHI
LRKAVEEARHPDLQGLTIYVAQDCTVYNSDVIDKQTDSVTAGDARDKAVIILVPVRLGGE
RTNTDYLEFVKGVLSLEYCVGIIGGKPKQSYYFAGFQDDSLIYMDPHYCQSFVDVSIKDF
PLETFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFERASEEITKMLKISSKEKYPLFTFVN
GHSKDFDFTSTAASEEDLFSEDERKNFKRFSTEEFVLL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggaggcttcaggaacagatgaagttgacaagctaaaaactaaatttatatctgcttgg
aacaatatgaaatatagttgggtgttgaaaacaaagacatattttagtagaaattcacct
gttttattgcttggaaaatgttatcattttaaatatgaagatgaaagcaagatgttgcct
gcaagatcaggatgtgccattgaagatcatgtaattgcagggaatgtggaagagttccgt
aaggatttcatttctagaatatggctgacctacagggaagaatttcctcaaatcgaagct
tcagccttgacgacagactgtggctggggctgcacgctgcggaccggccagatgctgctg
gctcagggactcatactccattttctcggtagagcttggacctggcctgatgcgctgcac
attgagaacgcagactctgactcatggacttccaacactgtcaaaaagtttactgcatcg
tttgaagcttcactttcgggggacagagaactcagaactccagcagtttctctgaaggaa
acatctgggaagtgtcccgatgaccacgcagtgcggaatgaggcttatcacaggaagatc
atctcttggtttggagattcccccgtggccgtctttggcttacatcgtctgatagagttt
gggaagaagtctgggaaaaaagctggcgattggtatggaccagcggtggttgctcacatt
ttaagaaaagcagttgaagaagcaaggcatccggatttgcaagggctaactatttatgtt
gcccaggactgtacagtttacaattctgacgtgattgataagcagactgactccgtgaca
gctggagatgcacgtgacaaggctgtcattattttagttcctgttagactcggtggagaa
aggaccaataccgactatctggagtttgtgaagggtgttttaagccttgaatactgtgta
ggtatcattggcggcaaacctaaacagtcatattactttgctggatttcaagatgacagt
ttgatttacatggatcctcattactgccagtcttttgtagatgtcagcataaaggatttc
cctctcgagacattccactgtccatctcctaaaaagatgtcatttcgaaaaatggatcct
agttgtacgataggattttactgtcgaaatgtccaggactttgaacgagcgtctgaagaa
atcactaagatgttgaaaatttcctctaaggagaaatatccactatttacttttgtaaat
ggccattccaaagactttgattttacatctaccgcagccagtgaagaagaccttttctca
gaagatgaaaggaagaatttcaaaagatttagcacagaagagtttgtcctcctttaa
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