Mus musculus (house mouse): 245886
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Entry
245886 CDS
T01002
Symbol
Ankrd27, D330003H11Rik, Varp
Name
(RefSeq) ankyrin repeat domain 27
KO
K20175
ankyrin repeat domain-containing protein 27
Organism
mmu
Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmu04131
]
245886 (Ankrd27)
Membrane trafficking [BR:
mmu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
245886 (Ankrd27)
Others
Specific organelles associated proteins
Melanosome
245886 (Ankrd27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_4
Ank_3
Ank_5
VPS9
ANK_LRRK2
Ribonuc_red_sm
EcoEI_R_C
Motif
Other DBs
NCBI-GeneID:
245886
NCBI-ProteinID:
NP_663608
MGI:
2444103
Ensembl:
ENSMUSG00000034867
UniProt:
Q3UMR0
LinkDB
All DBs
Position
7:35285652..35338662
Genome browser
AA seq
1048 aa
AA seq
DB search
MALYDEDLLKNPFYLALQKWRPDLCSKVAQIHGIVLVPCRGSLPGSVQASCQFESYVLVP
TEGHFQTLDGKAVVIEGNRIKLGAGFACLLSVPILFEETFYNEKEESFSILCIAHPLERR
ETSEEPSAPADPFSLKTIEDVREFLGRHSEKFDKNIASFHRTFRECERKSLRHHIDSVNA
LYTKCLQQLLRDSHLKVLAKQEAQMNLMKQAVEMYVHHDIYDLIFKYVGTMEASEDAAFN
KITRSLQDLQQKDIGVKPEFSFNIPRAKRELGQLNKCTSPQQKLLCLRKVVQLMTQSPSQ
RVNLETMCADDLLSVLLYLLVKTEIPNWMANLSYIKNFRFSSSAKDELGYCLTSVEAAIE
YIRQGSLSTKTPDAEGFGDRLFLKQRMNLLSQMTSTPIDCLFKHIASGNQKEVERLLSQD
DQDKDAMQKMCHPLCSCEDCEKLISGRLNDPSVVTPFSRDDRGQTPLHVAALCGQASLID
FLVSKGAVVNATDYHGSTPLHLACQKGFQSVTLLLLHYKASTEVQDNNGNTPLHLACTYG
QEDCVKALVYYDVQACRLDIGNEKGDTALHIAARWGYEGIIETLLQNGAPTAVQNRLKET
PLKCALNSKILSIMEAHHLSSDRRPRPSEVPAQSPTRSVDSISQGSSTSSFSSISVSFRQ
EEVKKDYREVEKLLRAVADGDLEMVRYLLEWTEDDLDDVEDAISTVDLEFCHPLCQCPKC
APAQKLARISANGLSVNVTNQDGFSPLHMAALHGRTDLVPLLLKHGAYSGARNTSQAVPL
HLACQQGHFQVAKCLLDSNAKPNKKDLSGNTPLICACSAGHHEVAALLLQHGASINACNN
KGNTALHEAVMGRHTLVVELLLFYGASVDILNKRQYTAADCAEQDSKIMELLQVVPGCVA
SLDSVEEADHEGYVTVEIRRKWNPKMYNLPEEPLRRQFCLINPGGRFQERTSRETMGRDR
SVPDLAGRSLQEPEKQRVTGKQSDLSDLSRYQTSEEGNKGLPERPVSRQAAPGHRPMVRR
HTVNDAAILQVPEVTVHLTTHEASVPQS
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggctctatatgatgaagatctcctgaaaaaccctttctacctggcccttcagaagtgg
cgccccgacttgtgcagcaaggtggcccagatccatggcattgtcctagtgccttgcaga
ggaagcctgcccggcagtgtgcaggcctcctgccagttcgagtcctatgttttggtaccc
acggaaggacactttcagaccttagatggaaaggctgtcgtcattgaaggaaacaggatt
aagctaggagcaggttttgcttgccttctctctgtgcccatcctctttgaggagactttc
tacaacgagaaagaggagagtttcagcattctctgcattgctcatcctttggagaggaga
gagacttcagaagaaccttcagcgcctgcagatcctttctccctgaaaaccatcgaagat
gtgagagaatttttgggaagacactcagagaaatttgacaagaacattgcctctttccac
cggacgttccgagaatgtgaaagaaagagcctccgccaccacatagactccgtaaatgct
ctctacaccaaatgcctccagcagcttctccgagactctcacctgaaggttcttgcaaag
caggaggcccagatgaacctgatgaagcaggccgtagagatgtatgtccatcacgatatt
tacgacctgatctttaaatacgtggggaccatggaggcgagcgaggatgccgcctttaac
aaaatcacgagaagccttcaagatctccagcagaaagacatcggcgtgaaacccgagttc
agcttcaacatccctcgggcaaagagagagctgggtcagttgaacaagtgtacgtcgcca
cagcagaagctgctgtgcctgaggaaggtggtccagctcatgacacaatctcccagccag
agagtgaacttggagaccatgtgtgccgatgatctcctctcggtcctgttatatctgctc
gtgaagacagagatccctaactggatggcaaatttgagctacatcaaaaacttcagattt
agcagctcggccaaagatgagctaggatactgcctgacctcagtcgaggctgcgattgaa
tacatccggcaaggaagtctctccacgaagacgcctgacgctgagggatttggcgacaga
ctatttctcaagcagcggatgaacttgctgtcccagatgacatcaacacccatcgactgc
ctgttcaagcacatcgcctctggtaaccaaaaggaagtggaaagacttctgagccaagat
gaccaggacaaagacgccatgcaaaagatgtgccacccactttgttcctgtgaggactgt
gagaagcttatctctgggaggctgaatgacccgtcagttgtcactcctttctccagagat
gacagaggtcaaacacccctccatgtggctgccctctgtggtcaggcatccctcattgac
ttcctggtctccaaaggtgccgtagtgaacgccacagactatcatgggtccaccccctta
catctggcatgtcagaaaggcttccaaagtgtgacgctgctgctgctgcactacaaggcc
agcactgaggttcaggacaacaacggcaacaccccgctgcacctggcctgcacctatggg
caggaggattgcgtgaaggccctggtctactatgatgtccaggcctgcagattggatatt
ggtaatgagaaaggagacacagccctgcacattgctgcacgctggggttacgagggcatc
atagagacactgctgcagaatggagcccccacagcagtccagaacagactgaaggaaaca
ccactcaagtgtgctctgaactcgaagattctgtctatcatggaagctcatcacctatcc
tctgacaggaggccaaggccttctgaggttcctgcacagtcccctacacgctctgtggat
tccatcagccagggctcctccacctccagcttttcttccatatcggtgagcttcaggcaa
gaagaggtcaaaaaggactacagggaggtagaaaagcttctaagggcagttgctgatggc
gatctagaaatggtacgataccttttggagtggacagaggatgacctagacgatgtggaa
gacgccatcagcacggtggatctcgaattctgtcaccccttatgccagtgtcccaagtgt
gctccagctcagaaactggccaggatttctgccaatgggcttagtgtgaatgtgaccaac
caggacggcttctctcccctgcacatggctgccctgcatggccgcacagacctcgtcccc
ctcctgctgaagcacggtgcttactcaggtgccagaaacacaagccaagccgtcccgctc
cacctggcctgccagcaggggcactttcaggtggcaaaatgtctcttagattccaatgca
aaacctaataaaaaggacctcagtgggaacacacccctcatttgtgcctgctctgccggc
caccatgaagtcgctgcgctgttgctacagcacggggcctccatcaatgcttgcaacaac
aaaggcaacacggccctgcatgaggctgtgatgggaaggcacaccctggtagtggagctg
cttctgttctacggggcgtcggttgacatcctgaacaagaggcagtacacggcggcggac
tgtgccgagcaggactcaaaaataatggagttgctgcaggtagtgccaggctgtgttgcg
tctctagacagcgtcgaggaggcagaccacgagggttacgtgactgttgagatcaggaga
aaatggaaccccaaaatgtacaacctgccagaggaacctcttaggagacagttttgcctc
attaacccggggggtcggttccaggagaggacatccagggagactatgggaagggataga
agtgtgcccgatcttgcaggacgttctcttcaggagccagagaagcaaagagtcaccgga
aagcagagtgacctgtcagacctgagcaggtatcagacctctgaggaaggaaacaagggg
ctcccggagaggcccgtgtcgagacaggctgctccaggacaccggccgatggtccgcaga
cacacagtcaatgacgcagccatactccaggtcccagaggtgactgtccacctcaccacc
cacgaggcgagtgttcctcagtcttag
DBGET
integrated database retrieval system