Mus musculus (house mouse): 245886
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Entry
245886 CDS
T01002
Symbol
Ankrd27, D330003H11Rik, Varp
Name
(RefSeq) ankyrin repeat domain 27
KO
K20175
ankyrin repeat domain-containing protein 27
Organism
mmu
Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmu04131
]
245886 (Ankrd27)
Membrane trafficking [BR:
mmu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
245886 (Ankrd27)
Others
Rab GTPases of specific organelles
Melanosome
245886 (Ankrd27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_4
Ank_3
Ank_5
VPS9
Ribonuc_red_sm
EcoEI_R_C
Motif
Other DBs
NCBI-GeneID:
245886
NCBI-ProteinID:
NP_663608
MGI:
2444103
Ensembl:
ENSMUSG00000034867
UniProt:
Q3UMR0
LinkDB
All DBs
Position
7:35285652..35338662
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AA seq
1048 aa
AA seq
DB search
MALYDEDLLKNPFYLALQKWRPDLCSKVAQIHGIVLVPCRGSLPGSVQASCQFESYVLVP
TEGHFQTLDGKAVVIEGNRIKLGAGFACLLSVPILFEETFYNEKEESFSILCIAHPLERR
ETSEEPSAPADPFSLKTIEDVREFLGRHSEKFDKNIASFHRTFRECERKSLRHHIDSVNA
LYTKCLQQLLRDSHLKVLAKQEAQMNLMKQAVEMYVHHDIYDLIFKYVGTMEASEDAAFN
KITRSLQDLQQKDIGVKPEFSFNIPRAKRELGQLNKCTSPQQKLLCLRKVVQLMTQSPSQ
RVNLETMCADDLLSVLLYLLVKTEIPNWMANLSYIKNFRFSSSAKDELGYCLTSVEAAIE
YIRQGSLSTKTPDAEGFGDRLFLKQRMNLLSQMTSTPIDCLFKHIASGNQKEVERLLSQD
DQDKDAMQKMCHPLCSCEDCEKLISGRLNDPSVVTPFSRDDRGQTPLHVAALCGQASLID
FLVSKGAVVNATDYHGSTPLHLACQKGFQSVTLLLLHYKASTEVQDNNGNTPLHLACTYG
QEDCVKALVYYDVQACRLDIGNEKGDTALHIAARWGYEGIIETLLQNGAPTAVQNRLKET
PLKCALNSKILSIMEAHHLSSDRRPRPSEVPAQSPTRSVDSISQGSSTSSFSSISVSFRQ
EEVKKDYREVEKLLRAVADGDLEMVRYLLEWTEDDLDDVEDAISTVDLEFCHPLCQCPKC
APAQKLARISANGLSVNVTNQDGFSPLHMAALHGRTDLVPLLLKHGAYSGARNTSQAVPL
HLACQQGHFQVAKCLLDSNAKPNKKDLSGNTPLICACSAGHHEVAALLLQHGASINACNN
KGNTALHEAVMGRHTLVVELLLFYGASVDILNKRQYTAADCAEQDSKIMELLQVVPGCVA
SLDSVEEADHEGYVTVEIRRKWNPKMYNLPEEPLRRQFCLINPGGRFQERTSRETMGRDR
SVPDLAGRSLQEPEKQRVTGKQSDLSDLSRYQTSEEGNKGLPERPVSRQAAPGHRPMVRR
HTVNDAAILQVPEVTVHLTTHEASVPQS
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggctctatatgatgaagatctcctgaaaaaccctttctacctggcccttcagaagtgg
cgccccgacttgtgcagcaaggtggcccagatccatggcattgtcctagtgccttgcaga
ggaagcctgcccggcagtgtgcaggcctcctgccagttcgagtcctatgttttggtaccc
acggaaggacactttcagaccttagatggaaaggctgtcgtcattgaaggaaacaggatt
aagctaggagcaggttttgcttgccttctctctgtgcccatcctctttgaggagactttc
tacaacgagaaagaggagagtttcagcattctctgcattgctcatcctttggagaggaga
gagacttcagaagaaccttcagcgcctgcagatcctttctccctgaaaaccatcgaagat
gtgagagaatttttgggaagacactcagagaaatttgacaagaacattgcctctttccac
cggacgttccgagaatgtgaaagaaagagcctccgccaccacatagactccgtaaatgct
ctctacaccaaatgcctccagcagcttctccgagactctcacctgaaggttcttgcaaag
caggaggcccagatgaacctgatgaagcaggccgtagagatgtatgtccatcacgatatt
tacgacctgatctttaaatacgtggggaccatggaggcgagcgaggatgccgcctttaac
aaaatcacgagaagccttcaagatctccagcagaaagacatcggcgtgaaacccgagttc
agcttcaacatccctcgggcaaagagagagctgggtcagttgaacaagtgtacgtcgcca
cagcagaagctgctgtgcctgaggaaggtggtccagctcatgacacaatctcccagccag
agagtgaacttggagaccatgtgtgccgatgatctcctctcggtcctgttatatctgctc
gtgaagacagagatccctaactggatggcaaatttgagctacatcaaaaacttcagattt
agcagctcggccaaagatgagctaggatactgcctgacctcagtcgaggctgcgattgaa
tacatccggcaaggaagtctctccacgaagacgcctgacgctgagggatttggcgacaga
ctatttctcaagcagcggatgaacttgctgtcccagatgacatcaacacccatcgactgc
ctgttcaagcacatcgcctctggtaaccaaaaggaagtggaaagacttctgagccaagat
gaccaggacaaagacgccatgcaaaagatgtgccacccactttgttcctgtgaggactgt
gagaagcttatctctgggaggctgaatgacccgtcagttgtcactcctttctccagagat
gacagaggtcaaacacccctccatgtggctgccctctgtggtcaggcatccctcattgac
ttcctggtctccaaaggtgccgtagtgaacgccacagactatcatgggtccaccccctta
catctggcatgtcagaaaggcttccaaagtgtgacgctgctgctgctgcactacaaggcc
agcactgaggttcaggacaacaacggcaacaccccgctgcacctggcctgcacctatggg
caggaggattgcgtgaaggccctggtctactatgatgtccaggcctgcagattggatatt
ggtaatgagaaaggagacacagccctgcacattgctgcacgctggggttacgagggcatc
atagagacactgctgcagaatggagcccccacagcagtccagaacagactgaaggaaaca
ccactcaagtgtgctctgaactcgaagattctgtctatcatggaagctcatcacctatcc
tctgacaggaggccaaggccttctgaggttcctgcacagtcccctacacgctctgtggat
tccatcagccagggctcctccacctccagcttttcttccatatcggtgagcttcaggcaa
gaagaggtcaaaaaggactacagggaggtagaaaagcttctaagggcagttgctgatggc
gatctagaaatggtacgataccttttggagtggacagaggatgacctagacgatgtggaa
gacgccatcagcacggtggatctcgaattctgtcaccccttatgccagtgtcccaagtgt
gctccagctcagaaactggccaggatttctgccaatgggcttagtgtgaatgtgaccaac
caggacggcttctctcccctgcacatggctgccctgcatggccgcacagacctcgtcccc
ctcctgctgaagcacggtgcttactcaggtgccagaaacacaagccaagccgtcccgctc
cacctggcctgccagcaggggcactttcaggtggcaaaatgtctcttagattccaatgca
aaacctaataaaaaggacctcagtgggaacacacccctcatttgtgcctgctctgccggc
caccatgaagtcgctgcgctgttgctacagcacggggcctccatcaatgcttgcaacaac
aaaggcaacacggccctgcatgaggctgtgatgggaaggcacaccctggtagtggagctg
cttctgttctacggggcgtcggttgacatcctgaacaagaggcagtacacggcggcggac
tgtgccgagcaggactcaaaaataatggagttgctgcaggtagtgccaggctgtgttgcg
tctctagacagcgtcgaggaggcagaccacgagggttacgtgactgttgagatcaggaga
aaatggaaccccaaaatgtacaacctgccagaggaacctcttaggagacagttttgcctc
attaacccggggggtcggttccaggagaggacatccagggagactatgggaagggataga
agtgtgcccgatcttgcaggacgttctcttcaggagccagagaagcaaagagtcaccgga
aagcagagtgacctgtcagacctgagcaggtatcagacctctgaggaaggaaacaagggg
ctcccggagaggcccgtgtcgagacaggctgctccaggacaccggccgatggtccgcaga
cacacagtcaatgacgcagccatactccaggtcccagaggtgactgtccacctcaccacc
cacgaggcgagtgttcctcagtcttag
DBGET
integrated database retrieval system