Mus musculus (house mouse): 246102
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Entry
246102 CDS
T01002
Symbol
Rttn, 4921538A15Rik, C530033I08Rik, D230040K24
Name
(RefSeq) rotatin
KO
K16484
rotatin
Organism
mmu
Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mmu03037
]
246102 (Rttn)
Cilium and associated proteins [BR:
mmu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
246102 (Rttn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RTTN_N
Motif
Other DBs
NCBI-GeneID:
246102
NCBI-ProteinID:
NP_780751
MGI:
2179288
Ensembl:
ENSMUSG00000023066
UniProt:
Q8R4Y8
LinkDB
All DBs
Position
18:88989860..89149140
Genome browser
AA seq
2226 aa
AA seq
DB search
MVLAGLIRKLGHQLAEIRERALKSILCKIEHNLICYADLIQERLLFLHLLEWFNFPSVPM
KEEVLNLLSRLVKYSPAVQHLIDLGAVEFLSKLRPNVEPVIQAEIDGILDGLFILPSEVP
ALCSSSYHTDQIELSQQPEVLTGYFPQDKSNFQQMEVPPGPAGNQAVKWLRFSVFPWLPL
TTTDRHVLSSNESSLRSSNHTLIWNTCELLKDVIMQDFPAEIFLQRPKIVQGLLCLVKLA
FGGDGKHRLALQSVSCLQQLCTSLRNRLNFYRDPNFFSSRQDTVSQNSSLSYCHEARGPY
HSPNPSPGSSSSRPSVVGRTGQRPRGDGQDWDAVSSSGSSSHTHVNSRISVHSPLDVAPV
DLPELEAEDTLELQFQQLSLPQFCISTLEAAAPLLRTGSREMIIRVLELLAEDMLLIGQA
ISSEIWDDNSLFAINVKEKLLQVLGSLGETMCYRKTSFSMEQAEAVLVHHRMAFVSISLF
TVRLLQLLLPVEKASEFLPESMSAALFFVSLDMPISLEYPEIHDTVVAYLEQLDSENYSI
YKRTAEAVYSIECTCNFLSDVGKEGEKNLLELVELADQALRSFSYHQHSPLIKEIICICS
KIWKSAQASPLLQGESQKVFLHMLSHPLPQVKVETYQCCLEIVKECLGVQNVTKPVSSLC
SGIHFLLHPKVLYEISAFGIQESKNEVNAAAKAILLYLLQGRLMMTALTWNKFIESLAPV
IPVLQGYADTEDPLGNCILLLSKVSSEAGEGALPCTARLKSVLRLLLVKKPSVRSLALKL
LAFHLTSEEGADKKRPFIDAGVLSRVTNLFIVKKPIDLKLDDRRELVIKLETVKKVCDIF
TSDDVDLVLRKSAAEQLAVIMQDIKMHTVVKKLCLVEKIIGHLNEFVGQDGEVIECLIQP
CLTLLRKVLYADPVIRVSLSQQASLLTLLLRVSLIFHEDCTVVAEVGALFCLLLFDEVSR
MDTWSDTLSDKPSLSSVFSLPVSVFRRYHLPVHVTGHHAVSPYSIVLPLPTECLTLKPVS
DMLRIAWNLAWYHGSDNLLKQMTSEAKIQEFLDTLQLSTEDILALKITYTDSGLKDCLQS
IIQAGGHRDVRAAITRMSFYLLNDKLSLKDDIGPCGVTLKSLAWHTVLNRFLQVLPACTE
DEKLLIDIIHFLNKLIKEQRKNPSIELLNWILELLLRHNPSPLLDLLVLTDSHAGEETDD
VRTAVRQQLQKELISLLNSLLLVFMTVSDRKCLELFYVFQTQLSLKLLQCLRVTDAPHFY
GLPSLERTLAGMAHLTAFPGWSAHSPLSKPLEICGKYLSGLLEVITSFYVERGGNAMSFM
GKGVTKSTGLCLLHLSHEMIVQAPGSEWMPLWFLPLGSHSEEHAPTQQGLAWLIPLWVDR
DPEVRFTSLGLGSALTTIEAGCVALANSCQNISGGLWGTVVNILLDQSECSLVRREAAFI
LQNLLVIPMPSEIIKDYTWQGPCVHDEDSGLSLSGKPALQALLYHCRFYEHLTHMVKHCY
VGRYIFDFNFSAFTETSEYSDLNGLDDSFKFWRAPSGTSTQDHEPSSLSTSETMVAASVV
SSEIQPLLPSTLLPETALDQFVTQGQREMRPVRPRDSLLSTSLNRQYVFVTPSLLSAVCS
LLDNLLAVTPRDAANAFQQAHLIELLCSTVDASLIEMCIQELKTPLPLPSAVEHIQAQAS
FFLEYLSSLSQLLKSCLLVEPKLVTQDELLKPLITNVIRVLIVCPKDVLDVQLVLAFYRT
WTHLFDLLATLLRKAGAVSLVPLTSALAKHWEAVTDTLCRCVGLSFKCPALTIASLQFLS
VLLAEEEKRRVQDKDKTNEGQAPTVALLLDGTQGSLSSSERLNETILQCYEGISPKDVLK
RVAANALLSLLAVSRRAQRHALRSDLIENCMEQMKHINAQLNLDLLRPGKAVLKKKEDGF
IKELSITMQLLRNCLYQNEECKVAALEARLVPVLHSLWPWLLMEDSLMQIALQLLCVYTA
NFPAGCSSLCWSNYGQCIQTAHRGTPSSSLILCILKLASQMPAENTTIQQLVFMFLSNLA
LSHDCKGVIQKSNFLQHFLSLTLPKGGNQHLSTVAILWLKLLLNMSFGEDGQQMILRLDG
CLDLLIEMSKYKHKSSPHMPLLIFHNICFSPANKPKILANEKVVTLLAACLESENQTAQR
IGAASLWALTYNYQKAKATLKNPSIKRKVDEAYSIAKRTLSNSEENPLNSYYLKCLENLV
QLLNYS
NT seq
6681 nt
NT seq
+upstream
nt +downstream
nt
atggttctggcggggctcatcaggaagctcggccatcagctggcggagatcagggaacgc
gccctcaaaagtatcctgtgcaagattgagcacaacttgatctgctatgctgacttgatt
caggaaaggttgctttttctccatttgctcgaatggttcaatttcccatctgtcccaatg
aaagaggaggttctgaacttgttaagcagattggttaagtattctccagccgtccaacac
ttgattgaccttggtgcagtagagtttttatctaagctccgtccaaatgtggagccagta
atacaggctgagattgatggcattctcgatggacttttcattcttccttcagaagttcct
gcactgtgttcttccagttaccacactgatcaaattgaattgtcacaacaacctgaagtc
ttaacaggatattttccccaagacaaaagtaatttccagcagatggaagtaccaccaggg
ccagcgggaaaccaggctgtgaagtggctgaggttctctgtgtttccttggctacccctg
accacaacagacagacatgttctctcttccaatgaaagctctttgagaagtagtaaccac
actctgatctggaacacctgtgagcttctgaaggacgtgatcatgcaagactttcctgct
gagatttttcttcagaggccaaagattgttcagggccttttgtgtctggtgaagctggcc
ttcggaggagatgggaagcatcgtctagcattacagtcagtgtcctgtttgcagcagctg
tgcacaagcttaagaaacagactcaacttttacagagaccccaactttttctccagtaga
caagacacagtctcccagaattcttctttgtcttactgtcatgaagcaagaggtccttac
cattccccaaacccatccccgggaagcagtagctctcggccttctgtggttgggcgcaca
ggccagcgaccccgaggagatggtcaggactgggatgcagtgtcttccagtggaagtagt
agtcacacgcatgtgaactctaggatatctgtgcattctcctttggacgtggcacccgtg
gatctgccggagctggaagcagaggacacactggagctgcagttccaacagcttagtctt
cctcagttctgcatctccaccctggaggcagcagctcctctgctgagaacaggcagcaga
gaaatgataataagagttctggaactgcttgcagaggacatgctgctcattggacaagca
atttcatcagaaatctgggatgataacagcctttttgctatcaatgtgaaagagaaactg
ctccaagtgttggggtcccttggagaaaccatgtgctaccgtaaaaccagttttagcatg
gagcaagccgaggctgtactcgtgcaccacagaatggcctttgtcagcatctcactgttc
acagttcgactgttgcaacttcttctccctgttgaaaaggcgagtgagtttttgccagag
tccatgtcagcagcattattttttgtctccttggacatgcctatttctttggaatatcca
gagattcatgacacagttgtggcttatttggaacagctggattctgaaaattacagcatt
tataagcgaactgcagaggctgtttattcaattgaatgcacctgtaacttcctatctgat
gtggggaaagagggagaaaagaatcttctagaattagtggagctggcagaccaagccttg
cgtagcttttcctatcatcagcattctcccctaataaaggaaatcatctgcatctgttca
aagatctggaaatctgcacaggctagtccattactccagggagagagtcagaaggtgttt
ctccatatgctgtctcacccattgccacaggtgaaggtggagacttaccagtgctgcctg
gagattgtaaaggaatgtttaggtgtccaaaatgtcactaaacctgtgtcttcactttgt
agtggaattcattttctgcttcatccaaaagttctgtatgaaatctctgcatttggtatt
caagaatccaaaaatgaggtgaatgctgctgccaaggccattctgctgtatctgcttcag
ggacgattgatgatgacagctctgacctggaacaagtttatcgaatctctcgctcctgtc
attccagtgctacagggctacgctgatacagaagatcccttaggcaactgcattctcctt
ctaagcaaagtgagctctgaggcaggagaaggcgctctcccctgcactgcccggctgaag
tctgtgctacggcttttgctagtaaaaaaaccttcggttcgttcactagcattaaaactt
ttagcatttcatcttaccagtgaagaaggggctgataaaaagcgcccgttcatagatgct
ggcgttctctccagagttactaatctgtttattgtgaaaaaacctattgaccttaagttg
gatgacagaagagaactagttattaagttggagactgttaaaaaggtgtgtgacatattc
acctcagacgatgttgatcttgttttaagaaagtcagctgcagagcaactagctgtgata
atgcaagatattaaaatgcatacagtggtgaaaaagttatgcttagttgagaagattatt
ggacatttaaatgaatttgtgggtcaagatggtgaggttatagaatgcttgattcagcca
tgcctcacactcctgaggaaggttttgtacgctgacccggttatccgtgtttccttgtca
cagcaggcctctctcttgaccctattactcagagtttccttgatatttcatgaagattgt
actgtggtggctgaagtcggggcattgttttgtcttctattgttcgatgaagtatcaaga
atggatacatggtctgatactctttctgataagccttctttgtcatcagtcttcagtttg
ccggtttcagtctttagaaggtatcatctaccagttcatgtgactggccaccatgctgtg
agtccttactcaatagttttgccattacctactgaatgtttgaccctgaagccggtgtca
gatatgctgagaatagcttggaacctggcatggtatcatgggagtgataatctattgaaa
caaatgacctctgaagctaaaattcaggaatttttagatacactgcagctgtccacagaa
gatatccttgcactgaagatcacatacacggatagtgggttgaaggactgccttcagtcc
atcattcaggctggaggccacagggatgtgagggctgctatcaccaggatgagtttttat
cttttgaatgacaaactgtctttgaaggatgatattggtccatgtggcgttactttaaaa
tccttggcttggcacactgtgctgaacaggtttttacaagtacttcctgcttgcactgaa
gatgagaaactgctaatagatatcatacattttttgaataagttaataaaggaacaaaga
aaaaacccatcaattgaacttttaaactggattctggaattacttcttaggcataatcca
agtccactactagacctgctggttctgacagattcacatgcaggagaagaaacagatgac
gtccggactgctgtcagacagcaactccagaaagaactgatcagtcttctcaattccttg
ttactggtttttatgacagtctctgacaggaaatgcttggaactgttttacgttttccaa
acacagctgtctctgaagctactccagtgcctcagagtcacagatgctccccatttctat
ggcttaccttcattggagaggaccttagcagggatggctcacctcactgccttccctggg
tggagtgcacactctcctctttcaaagccacttgagatttgtgggaagtacttgtccggt
ctcctggaggtcattacttccttttatgttgaacggggaggaaatgctatgtccttcatg
gggaaaggcgttacaaagagcacaggtctttgcttacttcacttatcccatgagatgata
gtccaggcaccaggctcggagtggatgccgctttggttcttgcctttgggtagtcacagt
gaagaacatgcccctactcagcaaggattggcctggctaattcccttatgggttgataga
gacccagaggtgagattcacttcactggggttgggatcagcactgactactattgaagct
ggctgtgtggccttggcaaacagttgtcagaatatttctggtgggctctggggaaccgtg
gtgaacattcttctggatcaatcagaatgcagtctggtgcgccgggaggctgcatttatt
cttcagaatctccttgtaattccaatgccttcagaaattataaaggattatacttggcag
ggcccctgtgtccatgatgaggattctggcctgtcactttcaggaaaacctgcccttcag
gctcttttatatcactgtcgtttctatgaacatttgactcacatggtgaaacattgttat
gtaggaagatatatctttgattttaatttttctgcttttactgaaacttcagaatacagt
gatttaaatggtttagacgactcattcaagttttggagggccccttctgggacatctact
caggatcatgagccaagctctctttccacctcagaaacaatggtggctgcctcggtggtc
agttctgagattcagcccctgctgccgtcaacacttcttcctgaaactgcccttgaccag
tttgtgacgcaaggtcaacgtgaaatgagaccagtgcgacctcgtgactcattgctgtct
acttccctgaacaggcagtatgtgtttgttactccgtctctgctgtcagcagtctgtagc
cttttagacaacctcttggcagttactccaagagatgctgcaaatgcttttcaacaagct
catctcatagaactcctctgtagcacggtggatgcttccctcatagaaatgtgcatccaa
gaactcaagaccccactgcctttaccatctgctgttgaacatattcaggctcaggcttcc
tttttcttggaatacctatcctctttgtcccagctcttgaagtcctgtctgttggtagag
cctaaacttgtgacacaagatgagctcttgaaacctcttatcactaatgtcatccgagtt
ctcattgtgtgtcccaaagatgtattagatgtacagttagtgttggctttttaccgcaca
tggacgcatttatttgaccttctggccacactactgaggaaagctggtgctgtctccctt
gttcctcttacctcagctcttgccaagcattgggaggcagtgactgatacactgtgtaga
tgtgtgggcctctcattcaagtgccctgccctgactattgccagcctccagttcctgtct
gttctcttggctgaggaagaaaagaggcgtgtccaggacaaggacaaaacaaatgagggc
caggccccaacagtggccttacttcttgatggaactcagggaagccttagctcttcagag
cgacttaatgaaacaattcttcagtgctatgaaggaatatcccccaaagatgtcctgaaa
agagttgctgcaaatgccctgttgtcacttctggctgttagcagaagagcgcagaggcat
gctttgagatctgatctcatagaaaactgtatggagcagatgaagcacatcaatgcacaa
ctgaacttagatttgctgagacctgggaaagcagtactgaaaaaaaaggaggatggcttc
attaaagaattaagcatcaccatgcagctcctaagaaactgcctttatcaaaatgaagaa
tgtaaagtggcagctcttgaagcacgtcttgtgcctgtattgcactctctctggccttgg
cttttgatggaagattcattgatgcaaattgccttgcagttgctttgtgtctatactgca
aattttccagctggctgcagttccctttgttggtcaaattatggacagtgtattcaaact
gcacacagaggcacccccagtagctccctgatactgtgtatcctgaaactggcttctcag
atgcctgcagagaacaccaccattcagcagttggtttttatgtttctttcaaacttggcc
ttatctcatgactgcaagggagtaattcaaaagagcaactttctacagcacttcttgtcc
ctgacattgcctaaaggaggaaaccaacatctcagcactgtggccattctgtggttgaag
ttgctcctgaatatgtcatttggagaagatggacagcaaatgatcctgaggctagatggc
tgcttagacttactcatagagatgagcaagtacaagcacaagagcagccctcacatgcct
ctgctgatctttcataacatttgcttcagtcctgctaataagcctaaaatcctggctaat
gaaaaagttgttactcttctggctgcctgtttagaaagtgagaatcaaactgcccagagg
attggagcagcttcactttgggctctaacttacaattaccaaaaggcaaaagcaactttg
aaaaatccatcaataaaaagaaaagtagatgaagcatattccatagcaaagagaactctc
tcaaactcagaagaaaaccctctgaattcctactatttgaaatgccttgaaaatctagta
caactgcttaactattcctga
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integrated database retrieval system
