Mus musculus (house mouse): 268996
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Entry
268996 CDS
T01002
Symbol
Ss18, D130059H17, Ssxt, Syt
Name
(RefSeq) SS18, subunit of BAF chromatin remodeling complex
KO
K15623
protein SSXT
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03082
ATP-dependent chromatin remodeling
mmu05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
268996 (Ss18)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
268996 (Ss18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mmu03036
]
268996 (Ss18)
Chromosome and associated proteins [BR:
mmu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
268996 (Ss18)
GBAF(ncBAF) complex
268996 (Ss18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
268996
NCBI-ProteinID:
NP_033306
MGI:
107708
Ensembl:
ENSMUSG00000037013
UniProt:
Q62280
Q6P1I1
LinkDB
All DBs
Position
18:complement(14758686..14817476)
Genome browser
AA seq
418 aa
AA seq
DB search
MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKASECSQYQQILHTNLVY
LATIADSNQNMQSLLPAPPTQTMPMGPGGMSQSGPPPPPRSHNMPSDGMVGGGPPAPHMQ
NQMNGQMPGPNHMPMQGPGPSQLSMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMT
MSQGQPMGNYGPRPNMNMQPNQGPMMHQQPPSQQYNMPPGGAQHYQGQQAPMGLMGQVNQ
GSHMMGQRQMPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGY
QQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPG
QQQSYGPSQGGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggcgttcgcagccccgaggcagcggggcaagggcgaaatcacgcccgccgcc
atccagaagatgctggatgaaaacaaccatcttattcagtgtataatggactatcagaac
aaagggaaggcctcggagtgctcgcagtatcagcagatattgcatacaaacctggtatac
cttgctacaatagcagactctaatcaaaatatgcagtctctcttaccagcaccgcccaca
cagactatgccaatgggtcctggagggatgagtcagagtggccctccaccccctccccgc
tctcacaacatgccttcagatggaatggtgggtgggggccctcctgcaccacacatgcag
aaccagatgaacggccagatgcctgggcctaaccatatgccaatgcagggacctggaccc
agtcagctcagcatgacaaacagctccatgaatatgccttcaagtagccatggctccatg
ggaggttacaaccattctgtgccgtcatcccagagcatgcccgtgcagaaccagatgaca
atgagtcaggggcagccaatgggaaactatggtcccagaccaaacatgaatatgcaacca
aatcaagggccgatgatgcaccagcagcctccttctcagcagtacaatatgccacctgga
ggggcacagcattaccaaggacagcaggcgcccatggggctgatgggccaagttaaccaa
ggcagtcacatgatgggccagcgacagatgcctccctacagacctccgcaacagggccca
ccacagcagtactcaggccaggaagactattatggggaccaatacagtcatggtggacaa
ggtcctccagaaggcatgaaccagcaatattaccctgatggtcataatgattacggttat
cagcaaccgtcgtatcctgaacaaggctacgataggccttatgaggattcctcacaacat
tactacgaaggaggaaactcccagtatggccaacagcaagacgcttaccagggaccacct
ccacagcaaggatacccaccccagcagcagcagtacccgggacagcagggatacccaggg
cagcagcagagctatggtccttcgcagggcggtccaggtcctcagtatcctaattatcct
cagggtcaaggtcagcagtatgggggctatagaccaacacagccaggaccaccccagcca
ccccagcagaggccttatgggtacgaccagggacagtatggaaattaccagcagtga
DBGET
integrated database retrieval system
