Mus musculus (house mouse): 269113
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Entry
269113 CDS
T01002
Symbol
Nup54, 3110079L04Rik, 54kDa
Name
(RefSeq) nucleoporin 54
KO
K14308
nuclear pore complex protein Nup54
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03013
Nucleocytoplasmic transport
mmu05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
269113 (Nup54)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
269113 (Nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmu03019
]
269113 (Nup54)
Messenger RNA biogenesis [BR:
mmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
269113 (Nup54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
269113
NCBI-ProteinID:
NP_899248
MGI:
1920460
Ensembl:
ENSMUSG00000034826
UniProt:
Q8BTS4
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All DBs
Position
5:complement(92563399..92583117)
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AA seq
510 aa
AA seq
DB search
MAFNFGAPSGTSGTSTATAAPAGGFGGFGTTTTTAGSAFSFSAPTNTGSTGLLGGTQNKG
FGFGTGFGTTTGTGTGLGTGLGTGLGFGGFNTQQQQQQQQTSLGGLFSQPTQAPAQSTQL
INTASALSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIPPVEFTQENPFCRFKAVG
YSCMPNNKDEDGLVVLIFNKKETDIRSQQQQLVESLHKVLGGNQTLTVNVEGIKTLPDDQ
TEVVIYVVERSPNGTSRRVPATTLYAHFEQANIKAQLQQLGVTLSMTRTELSPAQIKQLL
QNPPAGVDPIIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISED
ISELQKNQTTTMAKIAQYKRKLMELSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTI
QGELNAPTQFKGRLNELMSQIRMQNHFGAVKSEEKYYIDADLLREIKQHLKQQQEGLSHL
ISIIKDDLEDIKLVEHGLNETIHSRGGVFS
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggctttcaattttggggctccttcgggcacttcgggcacctctacagccaccgcggca
ccggcgggtgggtttggaggatttggaacaacaactacaactgcaggctctgccttcagc
ttttcagccccaacaaacacaggcagtacaggccttctcggtggcactcagaacaaaggt
tttggctttggtactggttttggcacaacgacgggaactggcactggtttaggcactggc
ttgggaaccggacttggatttggaggatttaatacccagcagcagcagcagcagcagcag
acttctttaggtggtctcttcagtcagccgacccaggctcctgcacagtctacccagctc
atcaacactgccagcgcactttctgctccaacgctactgggggatgagagagacgccatc
ttggcaaagtggaaccagttgcaggccttctggggaacaggaaaaggatatttcaataat
aacattcctccagtggagtttacccaggagaatcccttttgccggtttaaggctgtaggc
tatagttgtatgcccaataataaagatgaagatggactagtagttttaattttcaacaaa
aaagaaacagatattagaagccagcaacagcaattggtagaatcattgcataaagttttg
ggaggaaaccagacccttacggtcaatgtggagggcattaagacgttgccggatgatcag
acggaagttgtcatttatgttgttgagcgttctccaaatggcacctcgagaagagttcca
gcgacaacactgtatgcccactttgagcaagccaacattaaagcccagctgcagcagctt
ggggtgaccctttctatgaccaggacagagctgtctcccgctcagatcaagcagctctta
caaaaccctcccgcaggtgttgatcctattatttgggaacaggccaaggtggataaccca
gactctgaaaagttaattcctgtaccaatggtgggtttcaaagaattgcttcgaagactg
aaggttcaagatcagatgactaagcagcatcagaccagactagatatcatatctgaagat
attagtgaactgcaaaaaaatcaaactacgactatggccaaaatagcacaatacaagagg
aaactgatggagctctcccacaggaccttacaggtcctaatcaaacaggaaatccagagg
aagagtggctatgcgatccaggctgatgaagagcagttgcgggttcagctagatactatt
caaggggaactgaatgcgcccactcagttcaaaggtcggctgaatgagctgatgtcccag
atcaggatgcagaatcattttggagccgtgaaatctgaagaaaagtactacatagatgca
gacctgttacgagaaatcaagcagcatttgaaacaacaacaggaaggccttagccacttg
attagcatcataaaagatgacctagaagacataaaactggtagaacatggattgaatgag
accatccatagcagaggcggtgtctttagctga
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