Mus musculus (house mouse): 269397
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Entry
269397 CDS
T01002
Symbol
Ss18l1, A230053O16Rik, CREST
Name
(RefSeq) SS18, nBAF chromatin remodeling complex subunit like 1
KO
K15623
protein SSXT
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03082
ATP-dependent chromatin remodeling
mmu05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
269397 (Ss18l1)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
269397 (Ss18l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mmu03036
]
269397 (Ss18l1)
Chromosome and associated proteins [BR:
mmu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
269397 (Ss18l1)
GBAF(ncBAF) complex
269397 (Ss18l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
269397
NCBI-ProteinID:
NP_848865
MGI:
2444061
Ensembl:
ENSMUSG00000039086
UniProt:
Q8BW22
LinkDB
All DBs
Position
2:179684276..179711994
Genome browser
AA seq
402 aa
AA seq
DB search
MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILDYQSKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTQNMNLGPGALSQSGSSQGLHPQGSLSDTVSTGLPPASLMQ
GQIGNGPNHVSMQQTAQSTLPTTSMSLSGSGHGTGPGYSHSGPTSQSVPMQGQGAISNYV
SRTNINMQSNPVSMMHQQAATSHYNSAQGGSQHYQGQAPIAMMGQGGQGGSMMGQRPMAP
YRPSQQGSSQQYLGQEEYYSEQYSHSQGSAEPMSQQYYPDGHGDYAYQQSSYTEQSYDRS
FEDPTQHYYEGGNSQYSQQQAGYQQGTAQQQTYSQQQYPNQQSYPGQQQGYGPAQGAPSQ
YSSYQQGQGQQYGSYRTSQTGPSAQQQRPYGYEQGQYGNYQQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggccttcgcgtcggcgcggccgagaggcaaaggggaggtcactcagcagacc
atccagaagatgctggatgagaaccaccacctgatccagtgcatcctggactaccagagc
aagggcaagaccgccgagtgcacgcagtaccagcagatcctgcaccggaacctggtctac
ctagccaccatagcagactccaatcagaacatgcagtccctgcttcccgcgcctccaaca
cagaacatgaacctcgggcccggagcactgagtcagagtggttccagccagggcctgcac
ccccagggcagcctcagcgataccgtcagcacaggcctgccccccgcctccctcatgcag
ggccagatcggtaacggtccaaaccacgtgtccatgcagcagacggctcagagcacactg
cccacaacctccatgagcttgtcaggcagtggccatggtactggccctgggtacagccac
tcggggcctacctcgcagagtgtccccatgcaaggccaaggtgccatcagcaactatgtg
tctcggaccaacatcaacatgcagtctaacccagtctccatgatgcaccagcaggcagcc
acgtcccactacaactcagcacagggtggaagccagcattaccagggccaggcacccatt
gccatgatgggccagggtggccaaggaggcagcatgatggggcagcggcccatggcgccc
tacagaccctcccagcaaggctcttcccagcagtacctgggccaagaggagtactacagc
gaacagtacagccacagccagggctccgcagagcccatgagtcaacagtactacccggat
ggccacggtgactacgcctatcagcagtcgtcctacacagagcagagctacgaccgctcc
tttgaggatcccacacagcactactacgaggggggaaactcccagtacagtcagcagcag
gctgggtaccagcagggcacagcacagcagcagacctactcccagcaacagtatcccaac
cagcagagctacccggggcagcagcagggctacggtcctgcccagggagccccctcacag
tactcaagctaccagcaaggacaaggtcagcagtatggaagctacagaacatcgcagacg
ggaccttctgcccagcagcagcggccttacggctatgaacagggccagtatggaaattac
cagcaataa
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integrated database retrieval system
