Mus musculus (house mouse): 27404
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Entry
27404 CDS
T01002
Symbol
Abca8b, Abca8
Name
(RefSeq) ATP-binding cassette, sub-family A member 8b
KO
K05650
ATP-binding cassette, subfamily A (ABC1), member 8
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
27404 (Abca8b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mmu02000
]
27404 (Abca8b)
Transporters [BR:
mmu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
27404 (Abca8b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
SMC_N
AAA_29
AAA_15
AAA_22
AAA_23
MMR_HSR1
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
27404
NCBI-ProteinID:
NP_038879
MGI:
1351668
Ensembl:
ENSMUSG00000020620
UniProt:
Q8K440
A2AM56
LinkDB
All DBs
Position
11:complement(109823016..109886642)
Genome browser
AA seq
1620 aa
AA seq
DB search
MIKREISVRQQTCALLQKNLLKKWRLKRESLMEWVSSLLLLLFLYWYPHGHGATDLSSVP
TKDLGRVDSFRQSGFMIGYTPVTSMTQQIMEKVAATPFMADKKVLGLLDEENIKELTESH
AEIIRVIFSDTFSYHLKFQFDQRIPTSRELRDHNAHCDGLYEDVNCLIAIFWKEGFVALQ
AAINAAIIETTTNHSVMEELLSVSGKFMKIHPFVRQEGILTDFFIFTCIISFSPITYYVS
INVARERKRMKGLMMMMGLRDPAFWLSWGLLYAGFVFIMALSLALVIKSVQFFILTSFMV
VFSLFLLYGLSMITLAFLMSALVRKSVLTGLSVFLLTIFWGSLGFTSLYRYLPAPVEWTL
SLFSPFAFTLGMAQLLRVDYDLNSNAPPDPASGSNLIIATNFMLVFDAFLYLALMMYFEK
VLPNEYGHQHSPLFFLKSSFWLQTRKPAHVILEDGIDPVPSSGDSFEPVSPEFHGKESIR
IRNISKEYKGKPNKIEALKDLTLDIYEGQITAVLGHSGAGKSTLLNILSGLSVPTKGSVT
IYNNNLSEMADLENILRIAGVCPQANVQFDFLTVRENLRLFAKIRGIPPQDVEKEVQRVL
LELEMKNIQNILAQNLSGGQKRKLTFGIAILGDSQIFLLDEPTAGLDPFSRHRVWNLLKE
RRADRVVLFSTQFMDEADILADRKVFISNGRLKCAGSSLFLKKKWGVGYHLSLQLKEVCV
PENITSLVKQHIPAAKLSAEGEGKLLYTLPLETTYRFPELCQSLDSCPGLGIENYGVSMT
TLNEVFLKLEGKASIDEPEVDIVGEGQTERSGDTERLMEMEQTLSSLRETEKTDGMALWR
QQTCAIAKVRLLKLKHERKTLLSVLLILVVGICPFLFENISTKIRQSSYTWELSPHDYFL
APGQQPQGMLTQLLIINKTEASIDDFIHSVERQNIALEVDASGTRDGTDDPSYNGALIVS
GNEKNHSFSFACNTKRLNCFPVLMDILSNGLLGMVKPSARIQTDRSTYLMDETIHPLEDL
WKTAFWLILTSACPPYIAMSSVTDYKNRAWFQLRVSGLFPSAYWVGQAMVDIPLYCFVFL
FMSLMDYLFRFPDTMFSIISHVIQIPCSVGYAISLIFLTYVISFISRKGKKNSGIWSLSF
YIITVFSVAVILLAFDVDGTQYYIIFLIPPSTLVGCLILSLHLFIGQIFEEGQVIEPFLV
FLIPFLHVFIFIFTLRCLEWKFGKKTMRKDPIFRISPRNNDVYQNPEEPEDEDEDVQMER
MRTANALVSTSFDEKPVIIASCLRKEYAGKQKHCLSKKKAKIATRNVSFCVRKGEILGLL
GHNGAGKSTSLKMISGDTKVTAGQVLLKGSREGDTPGFLGYCPQENALWPNLTVKEHLEI
FAAVRGLRKSHAAVAITRLADALKLQDQLKSPVKTLSEGVKRKLCFVLSILGNPSILLLD
EPSTGLDPEGQQQIWQAIRAIIKNTDRGALLTTHYMAEAEALCDRVAILVSGRLRCIGSI
QHLKSKFGKDYLLEMKVKTLEQVEPLNTEILRLFPQASRQERYSSLMAYKLPVEAVQPLS
QAFFKLEKVKQTFDLEEYSLSQSTLEQVFLELSKEQELDGLELEELDSSIKWKLLPQEEA
NT seq
4863 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagagagagataagtgtgcgccaacaaacttgtgctttattacagaagaacctt
cttaagaaatggagactgaaaagggagtccttgatggagtgggtgagctccttgctcctt
ctgcttttcttgtattggtatccccatggtcatggagctactgacctgtcttcagtgccc
accaaggatctgggacgagtcgattctttcagacaatctgggttcatgatagggtacacg
cctgtcaccagcatgacacaacagataatggagaaggtagctgcaacccctttcatggca
gataaaaaagtcttgggactgttggatgaagaaaatatcaaggaattaacagaaagtcat
gcagaaataataagagtcattttttctgacacattctcataccatctgaaattccagttt
gatcagagaatcccaacgtcgagggaactcagagaccataatgctcattgtgatggactg
tatgaagatgtcaactgtctgatagccatattctggaaggaaggatttgtggctcttcaa
gctgccatcaatgctgccatcatagaaaccacaacaaaccattcagtgatggaggaactg
ctatcagtgtcagggaaattcatgaagatccatccttttgtccgtcaagaaggaattctg
actgatttctttattttcacctgcatcatttccttctccccaatcacctattatgtgtca
atcaatgttgcaagagagaggaaaaggatgaagggcttgatgatgatgatgggccttcga
gatccagcattctggctatcttggggtctgctctatgctggctttgtcttcattatggct
ctatccctggcacttgttatcaaatctgtccagttttttattctaaccagcttcatggtg
gtctttagcctcttcctcctttatggattatctatgatcactttggctttcctaatgagt
gccttggtgaggaagtctgtcctcactggcctgtctgtgtttcttctcaccatcttctgg
ggaagtctaggcttcacatccctgtacagatacctccctgcacctgtggaatggactctc
agtctctttagcccctttgccttcacactaggaatggcccagctcttacgtgtggattat
gatttaaattctaatgcaccccctgatccagccagtggctcaaatctgattatagcaacc
aatttcatgctggtatttgatgcgtttttgtatctggccctgatgatgtacttcgaaaaa
gttctgccaaatgaatacggacatcagcactctcccctgtttttcctgaaatcttcattt
tggctacaaacacgaaagcctgctcatgtgattcttgaagatggaatagaccccgttcct
tcatcaggtgactcgtttgaaccggtgtccccagaattccacgggaaagaatccatcaga
atcagaaatatttcaaaagaatacaaaggaaagcccaataaaatagaagccttaaaagac
ctgacgttggacatatatgaaggccaaatcacagcagtacttggtcacagtggagctggg
aaatcaacactgttaaatattcttagcggattatctgttcctactaaaggttctgtcacc
atctataataataacttatcagaaatggctgaccttgaaaacatcttgaggattgctgga
gtttgtccacaagccaatgttcaatttgacttccttactgtgagagaaaacctcaggctt
tttgctaaaataagaggaattccaccccaagatgtggagaaagaggtgcaaagggttttg
ctagaattggaaatgaaaaatatccaaaatatccttgctcaaaacctaagtgggggacag
aagagaaagctgacttttggaatcgccattttaggagattctcagattttcctactggat
gagcccaccgctggcctggatcccttttcaaggcaccgggtgtggaatctcctgaaggag
cgcagagcagaccgtgtggtcctcttcagcacgcagttcatggatgaggctgacatcctg
gctgataggaaagtgttcatctccaatgggaggctgaagtgtgcaggatcatcgctcttt
ctgaagaagaaatggggagttgggtatcacttaagtttgcagctgaaagaagtctgtgtt
ccagaaaacatcacatcgcttgttaaacagcacatccctgcagccaagctatcagctgaa
ggggaaggaaagcttctctatacattacccttagaaacaacttatagatttccagagctt
tgccagagtcttgacagctgtcctggactgggaattgaaaactatggtgtttccatgaca
actttgaatgaggtgttcctgaagctagaaggaaaagcatcaattgatgaaccagaggtt
gacatcgtgggagaaggacaaacagagagatctggggacacagaaaggcttatggagatg
gagcaaactctctcttcacttagggaaacagagaagacagacggcatggcactctggagg
cagcaaacctgtgcgatcgcaaaggttcgcctgttgaagttaaagcacgaaaggaaaaca
cttttatctgtgctcttgatactggtagtcggcatctgtccttttctttttgaaaatatc
tcaacgaaaatacgtcaaagctcttacacttgggaactttccccacacgattacttcctt
gctccgggacaacagccccagggcatgctcactcagttattgatcattaataagacagag
gcaagcattgacgactttatccattctgtggaacgccagaacatagctttggaagtcgat
gcttctggaaccagagatggtacagatgacccatcctacaatggagcccttatagtgtct
ggcaatgagaagaaccacagcttttcgtttgcatgcaacaccaagagactgaactgcttc
ccagttctgatggacatcctgagcaacgggctacttggaatggttaaaccgtcagcccgc
atccaaaccgacagaagcacatatctcatggatgaaactattcatcctttagaagaccta
tggaagactgcattctggctgattctgacctccgcttgccctccttatattgccatgagc
agtgtcacagattataagaacagagcttggttccagctgcgggtctccggcctcttccct
tcggcttactgggtcgggcaggcaatggtggacattcccctgtactgctttgtcttcctc
ttcatgtcgttaatggactacctttttcgcttcccagataccatgttttctattataagc
cacgtcatacaaatcccgtgttctgttggctatgccatatccctgatcttcttaacatac
gtgatttcgttcatttctcgcaaggggaaaaaaaacagcggcatttggtcacttagcttc
tatatcatcactgtgttctcagtggctgtaatattgctggcttttgatgtggatggtaca
cagtactacatcatctttttgataccaccgtccactctggttggatgcttgatcttgtct
ttgcatcttttcataggtcaaatctttgaagaaggacaagttatagagccattcctggta
ttcctcattcctttccttcatgttttcatttttatttttacccttcgatgtctggaatgg
aagtttggaaagaaaacaatgaggaaagatcccatctttagaatttctccaagaaacaat
gatgtgtatcaaaacccagaagagccagaagatgaggatgaagatgttcaaatggagaga
atgagaacagcgaatgccttggtatccaccagttttgatgagaagccagtcatcattgcc
agctgcctacgcaaagaatatgcagggaagcagaagcattgcctttccaagaagaaggcc
aagatagccactaggaatgtctcgttttgtgtcaggaaaggtgagattctaggattgttg
ggacacaatggagctggcaaaagtacatctcttaaaatgataagtggagacacaaaagtc
acagctgggcaggtgttactgaaagggagcagagaaggggacaccccggggttcctgggg
tactgtcctcaggagaatgctctgtggcccaacctcactgtgaaggagcacctggagata
tttgctgcagtgaggggcttgcgcaaaagtcacgctgcagtcgccatcacaaggttggca
gatgcgctcaagctgcaggaccagctgaagtctcctgtgaagacgctgtcagagggagtg
aagagaaagctgtgcttcgtgctgagcatcctggggaacccatctatattgcttctagat
gagccgtccactgggctggatcctgaggggcagcagcaaatatggcaagcaatcagggcc
atcataaaaaatacagacaggggtgccctgctgaccacccattacatggcagaggctgag
gctctgtgtgaccgagtggccatcctggtgtctggaaggctgaggtgtattggatccatc
caacatctcaaaagcaaatttggcaaagattacctgctggagatgaaggtgaagaccctc
gagcaggtggagcccctcaatacggagatcctcaggctttttccccaggcttctaggcag
gaacggtactcttctctgatggcttacaaattaccagtggaagctgtacagcctttatcc
caagctttcttcaagttagagaaagttaagcagacctttgacctggaggagtacagcctc
tctcagtctaccctggagcaggtcttcctagagctctccaaggagcaggagctggatggc
cttgaattagaagaattagactcctccataaagtggaagctcctcccacaggaagaggct
taa
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integrated database retrieval system
