Mus musculus (house mouse): 277328
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Entry
277328 CDS
T01002
Symbol
Trpa1, Anktm1, TRPA1b
Name
(RefSeq) transient receptor potential cation channel, subfamily A, member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
277328 (Trpa1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mmu04040
]
277328 (Trpa1)
Ion channels [BR:
mmu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
277328 (Trpa1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
ANK_LRRK2
DUF7694
SchA_CurD
Motif
Other DBs
NCBI-GeneID:
277328
NCBI-ProteinID:
NP_808449
MGI:
3522699
Ensembl:
ENSMUSG00000032769
UniProt:
Q8BLA8
LinkDB
All DBs
Position
1:complement(14942868..14989086)
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AA seq
1125 aa
AA seq
DB search
MKRGLRRILLPEERKEVQGVVYRGVGEDMDCSKESFKVDIEGDMCRLEDFIKNRRKLSKY
EDENLCPLHHAAAEGQVELMELIINGSSCEVLNIMDGYGNTPLHCAAEKNQVESVKFLLS
QGANPNLRNRNMMSPLHIAVHGMYNEVIKVLTEHKATNINLEGENGNTALMSTCAKDNSE
ALQILLEKGAKLCKSNKWGDYPVHQAAFSGAKKCMELILAYGEKNGYSRETHINFVNHKK
ASPLHLAVQSGDLDMIKMCLDNGAHIDMMENAKCMALHFAATQGATDIVKLMISSYTGSS
DIVNAVDGNQETLLHRASLFDHHDLAEYLISVGADINSTDSEGRSPLILATASASWNIVN
LLLCKGAKVDIKDHLGRNFLHLTVQQPYGLRNLRPEFMQMQHIKELVMDEDNDGCTPLHY
ACRQGVPVSVNNLLGFNVSIHSKSKDKKSPLHFAASYGRINTCQRLLQDISDTRLLNEGD
LHGMTPLHLAAKNGHDKVVQLLLKKGALFLSDHNGWTALHHASMGGYTQTMKVILDTNLK
CTDRLDEEGNTALHFAAREGHAKAVAMLLSYNADILLNKKQASFLHIALHNKRKEVVLTT
IRNKRWDECLQVFTHNSPSNRCPIMEMVEYLPECMKVLLDFCMIPSTEDKSCQDYHIEYN
FKYLQCPLSMTKKVAPTQDVVYEPLTILNVMVQHNRIELLNHPVCREYLLMKWCAYGFRA
HMMNLGSYCLGLIPMTLLVVKIQPGMAFNSTGIINGTSSTHEERIDTLNSFPIKICMILV
FLSSIFGYCKEVIQIFQQKRNYFLDYNNALEWVIYTTSIIFVLPLFLNIPAYMQWQCGAI
AIFFYWMNFLLYLQRFENCGIFIVMLEVIFKTLLRSTGVFIFLLLAFGLSFYVLLNFQDA
FSTPLLSLIQTFSMMLGDINYRDAFLEPLFRNELAYPVLTFGQLIAFTMFVPIVLMNLLI
GLAVGDIAEVQKHASLKRIAMQVELHTNLEKKLPLWYLRKVDQRSTIVYPNRPRHGRMLR
FFHYFLNMQETRQEVPNIDTCLEMEILKQKYRLKDLTSLLEKQHELIKLIIQKMEIISET
EDEDNHCSFQDRFKKERLEQMHSKWNFVLNAVKTKTHCSISHPDF
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcggcttgaggaggattctgctcccggaggaaaggaaggaggtccagggcgtt
gtctatcgcggcgtcggggaagacatggactgctccaaggaatcctttaaggtggacatt
gaaggagatatgtgtagattagaagacttcatcaagaaccgaagaaaactaagcaaatat
gaggatgaaaatctctgtcctctgcatcacgcagcagcagaaggtcaagttgaactgatg
gaactgatcatcaatggttcttcgtgtgaagtgctgaatataatggatggttatggaaat
accccactgcattgtgctgcagaaaaaaatcaagttgaaagtgtaaagtttcttctcagc
caaggagcaaatccaaacctccgaaatagaaacatgatgtcaccccttcacatagctgtg
catggcatgtacaacgaagtgatcaaggtgttgactgagcacaaggccactaacatcaat
ttagaaggagagaatgggaacacggctttgatgtccacgtgtgccaaagacaacagtgaa
gctttgcaaattttgttagaaaaaggagctaagctgtgtaaatcaaataagtggggagac
taccctgtgcaccaggcagcattttcaggtgccaaaaaatgcatggaattaatcttagca
tatggtgaaaagaacggctacagcagggagactcacattaattttgtgaatcacaagaaa
gccagccctctccacctagcagttcaaagcggagacttggacatgattaagatgtgcctg
gacaacggtgcacacatcgacatgatggagaatgccaaatgcatggccctccattttgct
gcaacccagggagccactgacatcgttaagctcatgatctcatcctataccggaagtagt
gatattgtgaatgcagttgatggcaatcaggagaccctgcttcacagagcctcgttattt
gatcaccatgacctggcagaatacctaatatcagtgggagcagacatcaacagcactgat
tctgaaggacgctctccacttattttagcaacagcttctgcatcctggaacattgtgaat
ttgctcctctgtaaaggtgccaaagtagacataaaagatcatcttggacgtaactttttg
catttgactgtgcagcagccttatggactaagaaatttgcggcctgagtttatgcagatg
caacacatcaaagagctggtgatggatgaagacaatgacggatgcacacctctccattat
gcctgtaggcagggggttcctgtctctgtaaataacctccttggcttcaatgtgtccatt
catagcaaaagtaaagataagaagtcgcccctgcattttgcagccagttatgggcgcatc
aatacatgtcagagacttctgcaagacataagtgatacgaggcttttgaatgaaggggat
ctccatgggatgacccctctccacctggcagcaaaaaatgggcatgataaagtcgttcaa
ctccttctgaagaaaggggccttatttctcagtgaccacaatggctggactgctttgcat
cacgcctccatgggtgggtacactcagaccatgaaggtcattcttgatactaacttgaaa
tgcacagaccgactagatgaagaagggaacacagcactccactttgcagcacgggaaggc
catgccaaggctgttgcaatgcttttgagctacaatgctgacatcctcctgaacaagaag
caagcttcctttctgcatattgccctgcacaataagcgcaaggaagtggttctcacaacc
atcagaaataaaagatgggatgagtgtcttcaagttttcactcataattctccaagcaat
cgatgtccaatcatggagatggtagaatacctccccgagtgcatgaaagttcttttagat
ttctgcatgataccttccacagaagacaagtcctgtcaagactaccatattgagtataat
ttcaagtatctccaatgcccattatccatgaccaaaaaagtagcacctacccaggatgtg
gtatatgagcctcttacaatcctcaatgtcatggtccaacataaccgcatagaactcctc
aaccaccctgtgtgtagggagtacttactcatgaaatggtgtgcctatggattcagagcc
catatgatgaacctaggatcttattgtcttggtctcatacccatgacccttcttgttgtc
aaaatacagcctggaatggccttcaattctactggaataatcaatggaactagtagtact
catgaggaaagaatagacactctgaattcatttccaataaaaatatgtatgattctagtt
tttttatcaagtatatttggatattgcaaagaagtgatccaaattttccaacagaaaagg
aattacttcctggattacaacaatgctctggaatgggttatctatacaactagtatcatc
ttcgtgttgcccttgttcctcaacatcccagcgtatatgcagtggcaatgtggagcaata
gcgatattcttctactggatgaacttcctactgtatcttcaaaggtttgagaactgtgga
attttcattgttatgttggaggtgatttttaaaacattgctgagatcgaccggagtgttt
atcttcctcctactggcttttggcctcagcttttatgttctcctgaatttccaagatgcc
ttcagcaccccattgctttccttaatccagacattcagtatgatgctaggagacatcaat
tatcgagatgccttcctagaaccattgtttagaaatgagttggcatacccagtcctgacc
tttgggcagcttattgccttcacaatgtttgtcccaattgttctcatgaacttactgatt
ggcttggcggttggggacattgctgaggtccagaagcatgcgtcattgaagaggattgct
atgcaggtggaacttcataccaacttagaaaaaaagctgccactctggtacttacgcaaa
gtggatcagaggtccaccatcgtgtatccaaatagacccaggcacggcaggatgctacgg
ttttttcattactttcttaatatgcaagaaacacgacaagaagtaccaaacattgacaca
tgcttggaaatggaaatattgaaacagaaatatcggctgaaggacctcacttccctcttg
gaaaagcagcatgagctcatcaaactcatcatccagaagatggagatcatctcagagaca
gaagatgaagataaccattgctctttccaagacaggttcaagaaggagaggctggaacag
atgcacagcaagtggaattttgtcttaaacgcagttaagactaaaacacattgttctatt
agccacccggacttttag
DBGET
integrated database retrieval system
