Mus musculus (house mouse): 28035
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Entry
28035 CDS
T01002
Symbol
Usp39, CGI-21, D6Wsu157e, SAD1
Name
(RefSeq) ubiquitin specific peptidase 39
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
28035 (Usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmu03041
]
28035 (Usp39)
Spliceosome [BR:
mmu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
28035 (Usp39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
28035
NCBI-ProteinID:
NP_613058
MGI:
107622
Ensembl:
ENSMUSG00000056305
UniProt:
Q3TIX9
LinkDB
All DBs
Position
6:complement(72295749..72322190)
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AA seq
564 aa
AA seq
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MSSRSKRQSHGSTRGKRESESRGSSGRIKKERDREKEPEAASSRGSPVRVKREAEPAARE
VPAPALPVVRVKREREADEDSEPEREVRAKNGRVDSEDRRSRHCPYLDTINRSVLDFDFE
KLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEI
IDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQ
ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ
AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVNDVFQGSMRIFTKKLP
HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK
FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR
EYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQM
ITLSEAYIQIWKRRDNDETNQQGA
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgtctagccggtccaagcggcagtcccatggttccacccgcgggaagcgtgagtccgag
tctcgtggcagctcgggtcgcatcaagaaggagcgagaccgtgagaaggagcccgaggcg
gcgagctcccggggtagcccggtccgcgtgaagcgggaggccgagccggctgcgcgagag
gtcccggcgcccgcgctcccggtcgtgcgggtgaagcgtgagcgcgaggccgatgaagac
tcggagcccgagcgggaggtgcgagcaaagaatggccgagtggattctgaagaccggagg
agtcgtcactgcccgtacttggataccattaataggagtgtgctggacttcgactttgag
aaactctgctccatttctctctcgcacatcaacgcatacgcctgtctggtgtgtggcaag
tactttcaaggccggggcttaaagtctcatgcctacatccacagtgtccagttcagccac
catgtcttcctcaacctccacactctcaagttttactgccttcctgacaactatgaaatc
attgattcctcgctggaggatatcacgtatgtgttgaagcctactttcacaaagcagcaa
attgcaaacttggataagcaagccaaattgtcccgggcatatgatggcaccacttacctg
ccagggatcgtgggactgaacaacataaaagccaacgactatgcaaatgctgtgctgcag
gctctatctaatgtccctcctcttcggaactacttcctggaggaagacaattacaagaac
atcaagcgtcctccgggggacatcatgttcttgttggttcagcgttttggagagctgatg
agaaagctctggaacccccgaaacttcaaggcgcatgtctctcctcatgagatgcttcag
gctgtcgtactttgcagcaagaagactttccaaattaccaaacaaggggatggagttgac
ttcctgtcttggtttctgaatgctctgcactctgctctgggaggcaccaagaagaagaaa
aagactattgtgaatgatgttttccagggatcaatgagaattttcaccaaaaagcttcct
catcctgatctgccagcggaagagaaagagcagctgctccacaatgatgagtaccaagag
acgatggtagagtccacgttcatgtacctgacgctggaccttcccacggccccgctctat
aaggatgagaaggagcagctcatcatcccccaggtgcctctcttcaacatcctggccaag
ttcaacggcatcacggagaaggaatacaagacttataaggagaacttcctgaaacgcttc
cagctcaccaagctgcctccgtatctaatcttttgcatcaagagatttactaagaacaac
ttctttgtggagaagaatccaacaattgtcaacttccctatcacaaatgtggatctgaga
gaatacttatctgaagaagtccaagccgtccacaagaacaccacctatgatctcatcgcc
aacatcgtgcatgatggcaagccctctgagggctcctacaggatccacgtgcttcatcat
gggactggcaagtggtatgaattacaagacctccaggtgacagacattctgccccagatg
atcacactgtctgaggcgtacattcagatttggaagaggcgggacaatgatgaaaccaac
cagcagggggcttga
DBGET
integrated database retrieval system