Mus musculus (house mouse): 326622
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Entry
326622 CDS
T01002
Symbol
Upf2
Name
(RefSeq) UPF2 regulator of nonsense transcripts homolog (yeast)
KO
K14327
regulator of nonsense transcripts 2
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03013
Nucleocytoplasmic transport
mmu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
326622 (Upf2)
03015 mRNA surveillance pathway
326622 (Upf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmu03019
]
326622 (Upf2)
Messenger RNA biogenesis [BR:
mmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
326622 (Upf2)
mRNA cycle factors
P-body specific factors
326622 (Upf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
326622
NCBI-ProteinID:
NP_001074601
MGI:
2449307
Ensembl:
ENSMUSG00000043241
UniProt:
A2AT37
LinkDB
All DBs
Position
2:5956218..6061514
Genome browser
AA seq
1269 aa
AA seq
DB search
MPAERKKSASMEEKESLLNNKEKDCSERRPVSSKEKPRDDLKVTAKKEVSKVPEDKKKRL
EEDKRKKEDKERKKKEEEKVKAEEELKKKEEEEKKKQEEEERKKQEEQAKRQQEEAAAQL
KEKEESLQLHQEAWERHQLRKELRSKNQNAPDNRPEENFFSRLDSSLKKNTAFVKKLKTI
TEQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKLSDVNCAAHLCSLFHQRYSDFAPSLL
QVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKSIINADRES
HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNLSFPPSEIISPEKQQPFQNLLKEYFT
SLTKHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLD
ENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAI
LFKDNEKSQNKDSNKDDSKEAKEPKDNKEASSPDDLELELENLEINDDTLELEGADEAED
LTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANRK
KLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIET
KNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESHL
RTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVRKKRPPLQEYVRKLLYKD
LSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVG
IHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGVN
PDGSPSSLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLEVW
TKDHPFPIDIDYMISDTLELLRPKIKLCNSLEESIRQVQDLEREFLIKLGLVNDKESKDS
MTEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEGSEEEEEGEEEEEENTDYLTDSN
KENETDEENAEVMIKGGGLKHVPCVEDEDFIQALDKMMLENLQQRSGESVKVHQLDVAIP
LHLKSQLRKGPPLGGGEGETESADTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWNQQQ
AEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNADL
IFKTGGRRR
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgtaaaaagtcagcaagtatggaagaaaaagaatctttactaaacaac
aaggaaaaagactgcagtgagaggcggccagtgagcagcaaggagaaaccaagggacgac
ctcaaggtcactgccaagaaggaggtcagtaaggtcccagaagacaaaaagaagagactg
gaagaagataagagaaaaaaggaagacaaggaacgcaagaaaaaagaggaagagaaggtg
aaggcagaggaagagttaaagaagaaggaagaggaagaaaagaagaaacaggaagaggaa
gagaggaaaaagcaggaggagcaggccaagcggcagcaggaagaagcggctgctcagctg
aaagagaaagaagaatctcttcagcttcatcaggaggcctgggaacgccatcaattacga
aaggaacttcgtagcaaaaaccaaaatgctccagacaaccgaccagaggaaaatttcttt
agccgcctagattcgagcttaaagaaaaataccgcttttgtcaagaaactaaaaacaatt
acagaacaacagagagactccttgtctcatgattttaatggcctgaatttaagcaaatat
attgcagaagccgtagcttccattgtggaggcaaaattaaaactctctgacgtgaactgt
gctgcgcacctctgctctctctttcaccagcggtactctgactttgcgccctctcttctt
caggtgtggaaaaaacatttcgaagcgaggaaagaggagaaaacgcctaacattaccaag
ctaagaactgacttgcgtttcattgcagaattgacaatagtgggaattttcactgacaag
gaaggtctttccttaatctacgaacagctaaaaagtattattaatgctgatcgagaatcc
cacactcatgtttctgtggtgattagtttctgtcgccattgtggagatgacattgctgga
cttgtaccgaggaaagtaaaaagtgctgcggagaagtttaatttgagttttcctcctagt
gagatcattagtccggagaagcagcagcctttccagaatcttttaaaagagtactttacg
tctttgaccaaacacctgaaaagggaccacagggagctgcagaacactgagaggcaaaac
aggcgtattctgcactctaaaggcgagctaagtgaggacaggcacaagcaatatgaggag
tttgcaatgtcttaccagaagctgctggcgaactctcagtccttagcggaccttttggat
gaaaatatgcccgatcttcctcaggacaaacccacaccagaagagcatgggcccggaatc
gacatatttacacccggcaaacctggagagtatgacttagaaggtggcatttgggaagat
gaagacgctcggaatttttatgaaaacctcatcgatttgaaagcatttgttccagccatc
ttgttcaaagacaatgaaaaaagtcagaacaaagattctaacaaagatgattccaaagag
gcaaaagaaccaaaggataataaggaggcatcaagtcctgatgatttggaacttgagttg
gagaatttagaaattaatgatgatacattggagttagaaggtgcagatgaagctgaagat
cttacaaagaaacttcttgatgaacaagaacaagaagatgaagaagccagcactggatct
catctcaaactcatagtagatgctttcctccagcagctgcccaactgtgtcaaccgagac
ctaatcgacaaggcagccatggatttttgcatgaacatgaacacaaaggcaaacaggaag
aagttggtgcgggcactcttcatagttcctaggcagaggttggatttgctaccattttat
gcaagattggttgctaccttgcacccctgcatgtctgatgtagcagaggatctttgttcc
atgctgaggggggatttcagatttcatgttcgaaaaaaggaccagatcaacattgaaaca
aagaacaaaactgtccgctttattggagagctaaccaagtttaagatgttcaccaaaaat
gatacactgcattgtctaaagatgcttctgtcagatttctctcatcatcatattgaaatg
gcatgcactctactggagacctgcggaagatttctcttcagatctccagaatcacacctg
aggaccagtgtgcttttggagcaaatgatgagaaagaaacaagcaatgcatcttgatgca
cgatatgttacaatggtagaaaatgcatattattactgcaacccaccgcccgccgaaaag
accgtgagaaagaaacgccctcctcttcaggagtatgtccgcaagcttctgtacaaggat
ctctctaaggtcacgacggaaaaggttttgagacagatgcgaaagttgccctggcaggac
caagaagtaaaagactatgttatttgttgtatgataaacatctggaacgtgaaatacaac
agtattcactgtgtagccaacctcctagcagggctagttctctaccaggaggatgttggg
atccatgttgtggatggcgtactcgaagatattcgattgggaatggaggttaatcaacct
aaatttaaccagaggcgtatcagtagtgccaagttcttaggagaactttataattacaga
atggtcgaatcagctgttattttcagaactctttattcttttacttcatttggtgtcaac
cctgatgggtctccaagttccctggaccctcctgagcatctctttagaattagactagta
tgcactattttggatacctgtggccagtactttgacagaggttccagtaaacgaaaactt
gactgcttccttgtatattttcagcgttatgtttggtggaagaaaagtttggaggtttgg
acaaaagaccatccatttcctattgatatagattacatgatcagtgatacactagaactg
ctaagaccaaagatcaaactctgtaattctctggaagaatccatcaggcaggtacaagac
ttggaacgagaattcttaataaaactaggcctagtaaatgacaaagagtccaaagattct
atgacagaaggggaaaatcttgaagaggatgaagaagaagaagaaggaggagctgagaca
gaggaacagtctggaaatgaaagtgaagtgaacgagccagaagaagaagagggttctgag
gaggaggaggagggagaggaggaggaagaggagaatacagattacctcacagattccaac
aaggagaacgagactgatgaagaaaatgctgaggtgatgattaagggaggcggactgaag
catgttccttgtgtagaagatgaggacttcattcaagctctggacaaaatgatgctagaa
aaccttcagcagcgaagtggtgagtctgttaaagtgcaccagcttgatgttgctatccct
ttgcatctcaaaagccagctgaggaaagggcccccgcttggcggtggggaaggagagacg
gagtctgcagacacgatgccatttgtcatgttaacaagaaaaggcaataaacagcagttt
aagattctcaatgtgcccatgtcatcccaacttgctgcaaatcattggaaccagcaacaa
gcagaacaagaggagaggatgaggatgaaaaagctcaccttagacatcaatgaacgacaa
gagcaagaagattatcaagaaatgttgcagtctcttgcacagcgcccagctccagcaaac
actaatcgtgagcggcggcctcgttaccagcatccaaagggagcacctaatgcagatcta
atctttaagactggtgggaggagacgttga
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integrated database retrieval system