Mus musculus (house mouse): 328110
Help
Entry
328110 CDS
T01002
Symbol
Prpf39, Srcs1
Name
(RefSeq) pre-mRNA processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
mmu
Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmu03041
]
328110 (Prpf39)
Spliceosome [BR:
mmu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
328110 (Prpf39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_PRP39_N
Suf
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
TPR_16
Motif
Other DBs
NCBI-GeneID:
328110
NCBI-ProteinID:
NP_001361141
MGI:
104602
Ensembl:
ENSMUSG00000035597
LinkDB
All DBs
Position
12:65083094..65110160
Genome browser
AA seq
546 aa
AA seq
DB search
MQGLLRFEDQDSARGDQNIAMFYPTSTQMVYRRGLQAIPLSVDLWIHYINFLKETLDPGD
QETNTTIRGTFEHAVLAAGTDFRSDKLWEMYINWENEQGNLREVTAVYDRILGIPTQLYS
HHFQRFKEHVQNNLPRDLLTGEQFIQLRRELASVNGHSGDDGPPGDDLPSGIEDITDPAK
LITEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYLE
FEIENGTHERVVVLFERCVISCALYEEFWIKYAKYMENHSIEGVRHVFSRACTVHLPKKP
MAHMLWAAFEEQQGNINEARIILRTFEECVLGLAMVRLRRVSLERRHGNMEEAEHLLQDA
IKNAKSNNESSFYAIKLARHLFKIQKNLPKSRKVLLEAIEKDKENTKLYLNLLEMEYSCD
LKQNEENILNCFDKAIHGSLPIKMRITFSQRKVEFLEDFGSDVNKLLNAYDEHQTLLKEQ
DTLKRKAENGSEEPEEKKAHTEDLSSAQIIDGDLQANQAAYNYSAWYQYNYQNPWNYGQY
YPPPPT
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgcagggactgctgcgctttgaagatcaagactctgcacgtggggatcagaacattgcc
atgttctatccaacctccacccaaatggtttatcgacgggggcttcaggcaatacctctt
agtgttgatctttggatacattatataaacttcttgaaagaaacattggaccctggtgat
caggagacaaacactacaataagaggaacttttgagcatgctgttctagctgcaggaaca
gattttcgatctgacaaattatgggaaatgtatataaactgggagaatgaacagggaaat
ctgcgagaagttacagctgtatacgatcgtattcttggtattccaacacagctgtacagt
catcattttcagagatttaaagaacatgtacaaaataacttgcctagagatcttttaact
ggtgaacagtttattcagctgagaagggaattagcttctgtaaatggacacagtggtgat
gacggccctcctggtgatgaccttccatcaggaattgaagacataactgatccagcaaag
ctaattactgaaatagaaaatatgagacacagaatcattgaaattcatcaagaaatgttt
aattataatgagcatgaagttagtaagaggtggacatttgaagaaggtattaaaagacct
tattttcatgtgaaaccattggaaaaggctcagctaaaaaactggaaagaatacttagaa
ttcgaaattgaaaatgggactcatgaaagagttgtggttctctttgaaagatgtgtcata
tcttgtgccctctatgaggagttttggattaagtatgccaagtacatggaaaaccatagc
attgaaggagtgaggcatgtcttcagcagagcttgtactgttcacctcccaaagaaaccc
atggcacacatgctttgggcagcttttgaggaacaacaggggaatattaatgaagccagg
attatcttgagaacgtttgaagaatgtgttctaggattggcaatggttcgattgcgaaga
gtaagtttagaacgacggcatggaaatatggaagaagccgaacatttgcttcaggatgct
ataaagaatgccaaatcaaataatgagtcatcattttatgctatcaaactagcccgacat
cttttcaaaatacagaaaaatcttccaaaatcaagaaaggtacttttggaagcaatcgaa
aaagataaggagaacacaaagttatacctcaatttacttgaaatggaatacagttgtgac
ctcaagcaaaatgaagaaaatatcctcaattgctttgacaaagccatacatggttcattg
cctattaaaatgagaattacattttctcaaagaaaagtggaattccttgaagattttggt
tcagatgttaataagcttctgaatgcatatgatgaacaccaaacacttctaaaagaacag
gatactttaaaaaggaaagctgaaaatggctcagaagaaccagaagaaaagaaagcacac
acagaagatttgtcatcagcacagatcattgatggggatttacaggcaaatcaagctgca
tataattacagtgcctggtaccagtacaattatcagaatccttggaattatggacagtat
tatcctccacctccaacttga
DBGET
integrated database retrieval system