KEGG   Mus musculus (house mouse): 328110
Entry
328110            CDS       T01002                                 
Symbol
Prpf39, Srcs1
Name
(RefSeq) pre-mRNA processing factor 39
  KO
K13217  pre-mRNA-processing factor 39
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mmu03041]
    328110 (Prpf39)
Spliceosome [BR:mmu03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    328110 (Prpf39)
SSDB
Motif
Pfam: HAT_PRP39_C HAT_PRP39_N Suf HAT_Syf1_CNRKL1_N TPR_14 HAT_Syf1_CNRKL1_C TPR_16
Other DBs
NCBI-GeneID: 328110
NCBI-ProteinID: NP_001361141
MGI: 104602
Ensembl: ENSMUSG00000035597
LinkDB
Position
12:65083094..65110160
AA seq 546 aa
MQGLLRFEDQDSARGDQNIAMFYPTSTQMVYRRGLQAIPLSVDLWIHYINFLKETLDPGD
QETNTTIRGTFEHAVLAAGTDFRSDKLWEMYINWENEQGNLREVTAVYDRILGIPTQLYS
HHFQRFKEHVQNNLPRDLLTGEQFIQLRRELASVNGHSGDDGPPGDDLPSGIEDITDPAK
LITEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYLE
FEIENGTHERVVVLFERCVISCALYEEFWIKYAKYMENHSIEGVRHVFSRACTVHLPKKP
MAHMLWAAFEEQQGNINEARIILRTFEECVLGLAMVRLRRVSLERRHGNMEEAEHLLQDA
IKNAKSNNESSFYAIKLARHLFKIQKNLPKSRKVLLEAIEKDKENTKLYLNLLEMEYSCD
LKQNEENILNCFDKAIHGSLPIKMRITFSQRKVEFLEDFGSDVNKLLNAYDEHQTLLKEQ
DTLKRKAENGSEEPEEKKAHTEDLSSAQIIDGDLQANQAAYNYSAWYQYNYQNPWNYGQY
YPPPPT
NT seq 1641 nt   +upstreamnt  +downstreamnt
atgcagggactgctgcgctttgaagatcaagactctgcacgtggggatcagaacattgcc
atgttctatccaacctccacccaaatggtttatcgacgggggcttcaggcaatacctctt
agtgttgatctttggatacattatataaacttcttgaaagaaacattggaccctggtgat
caggagacaaacactacaataagaggaacttttgagcatgctgttctagctgcaggaaca
gattttcgatctgacaaattatgggaaatgtatataaactgggagaatgaacagggaaat
ctgcgagaagttacagctgtatacgatcgtattcttggtattccaacacagctgtacagt
catcattttcagagatttaaagaacatgtacaaaataacttgcctagagatcttttaact
ggtgaacagtttattcagctgagaagggaattagcttctgtaaatggacacagtggtgat
gacggccctcctggtgatgaccttccatcaggaattgaagacataactgatccagcaaag
ctaattactgaaatagaaaatatgagacacagaatcattgaaattcatcaagaaatgttt
aattataatgagcatgaagttagtaagaggtggacatttgaagaaggtattaaaagacct
tattttcatgtgaaaccattggaaaaggctcagctaaaaaactggaaagaatacttagaa
ttcgaaattgaaaatgggactcatgaaagagttgtggttctctttgaaagatgtgtcata
tcttgtgccctctatgaggagttttggattaagtatgccaagtacatggaaaaccatagc
attgaaggagtgaggcatgtcttcagcagagcttgtactgttcacctcccaaagaaaccc
atggcacacatgctttgggcagcttttgaggaacaacaggggaatattaatgaagccagg
attatcttgagaacgtttgaagaatgtgttctaggattggcaatggttcgattgcgaaga
gtaagtttagaacgacggcatggaaatatggaagaagccgaacatttgcttcaggatgct
ataaagaatgccaaatcaaataatgagtcatcattttatgctatcaaactagcccgacat
cttttcaaaatacagaaaaatcttccaaaatcaagaaaggtacttttggaagcaatcgaa
aaagataaggagaacacaaagttatacctcaatttacttgaaatggaatacagttgtgac
ctcaagcaaaatgaagaaaatatcctcaattgctttgacaaagccatacatggttcattg
cctattaaaatgagaattacattttctcaaagaaaagtggaattccttgaagattttggt
tcagatgttaataagcttctgaatgcatatgatgaacaccaaacacttctaaaagaacag
gatactttaaaaaggaaagctgaaaatggctcagaagaaccagaagaaaagaaagcacac
acagaagatttgtcatcagcacagatcattgatggggatttacaggcaaatcaagctgca
tataattacagtgcctggtaccagtacaattatcagaatccttggaattatggacagtat
tatcctccacctccaacttga

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