Mus musculus (house mouse): 381305
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Entry
381305 CDS
T01002
Symbol
Rc3h1, 5730557L09Rik, Gm551, mKIAA2025
Name
(RefSeq) RING CCCH (C3H) domains 1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
mmu
Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmu03000
]
381305 (Rc3h1)
04121 Ubiquitin system [BR:
mmu04121
]
381305 (Rc3h1)
Transcription factors [BR:
mmu03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
381305 (Rc3h1)
Ubiquitin system [BR:
mmu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
381305 (Rc3h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
FYVE
zf_CCCH_4
zf-CCCH_4
Vesi_VP2
PaaA_PaaC
Baculo_IE-1
TPD52
zf-RING_4
zf-RING_6
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
381305
NCBI-ProteinID:
NP_001020123
MGI:
2685397
Ensembl:
ENSMUSG00000040423
UniProt:
Q4VGL6
Structure
PDB
LinkDB
All DBs
Position
1:160733981..160802546
Genome browser
AA seq
1130 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQIPEQQPITLCSGVEDTKHYEEAKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGADQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSAPILSDE
SAVDLSNRKPPALPNGIASSGSTVTQLIPRGTDPSFDSSLKPVKLDHLSSSAPGSPPDLL
ESAPKSISALPVNPHPVPPRGPTDLPPMPVTKPIQMVPRGSQLYPAQQADVYYQDPRGSA
PAFETAPYQQGMYYTPPPCVSRFVRPPPSAPEPGPPYLDHYSPYLQDRVINSQYGTQPQQ
YPPMYPAHYDGRRVYPAQSYTREEMFRESPIPIDIPSAAVPSYVPESRERYQQVEGYYPV
APHPAQIRPSYPRDPPYSRLPPPQPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSPTL
PPAFHPEEFLDEDLKVAGKYKANDYSQYSPWSCDTIGSYIGTKDAKPKDVVAAGSVEMMN
VESKGTREQRLDLQRRAVETSDDDLIPFGDRPTVSRFGAISRTSKTLYQGAGPLQAIAPQ
GAPTKSINISDYSAYGAHGGWGDSPYSPHANIPPQGHFIEREKMSMAEVASHGKPLLSAE
REQLRLELQQLNHQISQQTQLRGLEAVSNRLVLQREVNTLASQPQPPQLPPKWPGMISSE
QLSLELHQVEREIGKRTRELSMENQCSVDMKSKLGTSKQAENGQPEPQNKIRTEDLTLTF
SDVPNGSALTQENLSLLSNKTSSLNLSEDSEGGGDNNDSQRSGVVSNSAP
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacaatggacggatttcctttcctgcccaatttgcactcagact
ttcgacgaaacaattcgaaagcccatcagtttgggctgtggccatactgtctgcaaaatg
tgcctgaataaactccaccgtaaggcttgcccatttgaccagaccactatcaatacggac
attgagcttcttcctgtgaactcagcattactgcagctagtgggtgctcagatccctgag
caacagcccattactttgtgtagtggggttgaagatacaaagcattatgaggaagccaag
aaatgtgtagaagaattagcattgtacctgaagccactcagcagtgcgagaggtgtgggt
ctaaatagcactactcagagtgttctgagtcgcccaatgcagaggaaacttgtgactctg
gttcattgccagctagtggaagaagaaggcaggatccgtgctatgagggctgctcgatct
ttaggtgaacgcacagttacagagctcattctccagcaccagaatcctcagcaactctct
tctaatctctgggcagcagtcagagctaggggctgccagttccttggaccagcgatgcag
gaggaagctctgaagctggtcttgctggccttagaagatggttctgcattgtctcggaaa
gtgttggttctcttcgtggtgcaaagactggagccacgttttcctcaagcctctaaaacc
agcattgggcatgttgttcagctcctctacagagcctcctgcttcaaggtcaccaaacgt
gatgaagactcttctttgatgcaactgaaagaagaatttaggacttacgaagctctgagg
agagaacatgactcccagatagtgcaaattgctatggaagctggcttaaggattgcacca
gaccagtggtcctctttgctttatggggatcagtctcacaaatctcatatgcagtctatt
attgacaagttacagacccctgcctcatttgcacagagtgttcaggagctaacaattgct
ctccagcggactggagacccagcgaatttgaaccgactaagaccccatttggagttactc
gcaaacattgaccctagtccagatgctcctcctccaacatgggaacagctagaaaatggg
ctggttgctgtacgtacggtagtgcatggattggttgattatatccagaaccacagcaaa
aaaggagcagatcaacaacagcctccacagcatagcaaatacaaaacatacatgtgtcga
gatatgaagcaaaggggaggatgccctcgtggtgccagctgtacgtttgcacattcacag
gaagaactggaaaagtttcgtaaaatgaacaaacgtctggttcccagaagacccttgagt
gcctctttgggtcaacttaatgaggtgggcctgccttcagcacctatactttctgatgaa
agtgcagtggacttgtccaacagaaaacctcctgcactcccaaatggaattgcatcgtca
gggagcacagtgacacaactgattccacgtgggacagaccccagctttgattcttctctg
aaaccagtaaagctagaccacctgagcagtagtgctccggggtcccctcctgacctgctg
gaatctgcccctaagagtatttctgccttacctgtgaatccacatcctgtacctccaagg
ggaccaacagatctgcctcccatgcctgtcaccaaaccaattcagatggtacctcgaggt
tctcagctatatccagcacaacaagcagatgtttattatcaggatcctcgaggaagtgcc
ccagcttttgagacagcaccttaccagcagggtatgtactatactccaccaccatgtgtg
tcccgctttgtccgacctccaccatctgctcctgaacctggtcctccatacttggatcat
tattcaccctacctccaagatcgtgtcataaactctcagtatggcacacagccacaacag
tacccacctatgtacccagctcactacgatggccgccgtgtataccctgctcagtcttac
acaagagaggagatgttccgggaaagccctatacccattgacattccatctgcagcagtg
ccgtcctatgtacctgagtccagagaacggtaccaacaggtagagggttactacccggtg
gctcctcatccagctcagatcagaccttcataccccagggatcctccttatagtcggctt
cctcctccccaaccccatcctagtctggatgagctacatcgaaggcggaaggaaataatg
gcccagctagaggaaagaaaagtcatctctccacctccttttgcaccgtcaccaacattg
cctcctgcattccatccagaggaatttttggatgaagacttgaaggtagccggaaaatac
aaagcaaatgattatagccagtattctccttggtcatgtgataccatcggctcctacatt
ggaaccaaagatgcaaaacccaaagatgttgtggcagcggggagtgtggaaatgatgaat
gtagaaagtaaaggaacgagagagcagaggttggaccttcagagaagagcagtggagacg
agcgatgatgacctcatcccgtttggagaccgaccaacagtctctcgattcggtgccatc
tctcgaacatccaaaacactgtatcagggtgctggcccactgcaagctatagcacctcag
ggagcacccacaaaatctattaacatttccgattacagtgcatatggagctcatggtggc
tggggagattctccatactcacctcatgcaaacatacctcctcagggacacttcattgag
agggagaaaatgtccatggcagaagtggccagtcatggaaaaccccttctatctgctgaa
agagaacaattacggctagaattgcagcagctgaaccatcagatcagccagcagacccag
ctacgaggactagaggctgttagtaaccggctggtgttacagagggaggtgaacaccctg
gcaagccagccacagccccctcagctgcctccaaaatggcctggaatgatctcaagtgag
cagctcagcttggaactgcatcaggtggaaagagaaattgggaagaggacccgggaattg
agtatggagaaccagtgttctgtagacatgaaaagcaaactgggtacaagcaagcaagca
gaaaatggccagcccgagccccaaaacaagatccgcactgaggaccttacattgacattc
agtgatgtaccaaatggatcagccttgacacaagagaatctcagcctcctatcaaacaag
accagctctttgaatctgtcagaagactctgagggaggaggagataacaatgattcccag
agatcaggagttgtttccaattctgctccctag
DBGET
integrated database retrieval system