Mus musculus (house mouse): 385454
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Entry
385454 CDS
T01002
Symbol
Gm5396, EG385454
Name
(RefSeq) predicted pseudogene 5396
KO
K10802
high mobility group protein B1
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03410
Base excision repair
mmu04140
Autophagy - animal
mmu04217
Necroptosis
mmu04613
Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
385454 (Gm5396)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
385454 (Gm5396)
09143 Cell growth and death
04217 Necroptosis
385454 (Gm5396)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
385454 (Gm5396)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mmu03036
]
385454 (Gm5396)
03400 DNA repair and recombination proteins [BR:
mmu03400
]
385454 (Gm5396)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmu04147
]
385454 (Gm5396)
Chromosome and associated proteins [BR:
mmu03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
385454 (Gm5396)
DNA repair and recombination proteins [BR:
mmu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
385454 (Gm5396)
MMR (mismatch excision repair)
Other MMR factors
385454 (Gm5396)
Exosome [BR:
mmu04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
385454 (Gm5396)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
RNA_pol_3_Rpc31
Nop14
HMG_box_5
NOA36
Motif
Other DBs
NCBI-GeneID:
385454
NCBI-ProteinID:
XP_036018032
MGI:
3646589
Ensembl:
ENSMUSG00000084275
LinkDB
All DBs
Position
X:complement(151895892..151896458)
Genome browser
AA seq
188 aa
AA seq
DB search
MSKGEEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGNFEDMAKADKARYEREMKTYIP
HKGETKKKFKDPNAPKRPPLAFLFCSEYCPKITGKHPGLSIGDLAKKLGKMWHNTAADDK
QPYEKKAAKLKEKYEKGIAAHGAKGEPDAAKKGVVKAEKSKKKKEEEDGEEDEEDEEEEE
EDIGDDDG
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaggagaggagcacaagaagaagcacccggatgcttctgtcaacttctcagag
ttctccaaaaagtgctcagagaggtggaagaccatgtctgctaaagaaaaggggaatttt
gaagatatggcaaaggctgacaaggctcgttatgaaagagaaatgaaaacctacatccct
cacaaaggggagaccaaaaagaagttcaaggaccctaatgcacccaagaggcctcctttg
gccttcttgttctgttctgagtactgccccaaaatcacaggcaagcatcctggcttatcc
attggtgatcttgcaaagaaactaggaaagatgtggcacaacactgcagcggatgacaag
cagccctatgagaagaaggctgctaagctgaaggagaagtacgagaagggtattgctgcc
cacggagctaaaggagaacctgatgcagcgaaaaagggggtggtcaaggctgaaaagagc
aagaaaaagaaggaagaggaagatggtgaggaggatgaagaggatgaggaagaggaggaa
gaagatataggtgatgatgatggataa
DBGET
integrated database retrieval system