Mus musculus (house mouse): 432508
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Entry
432508 CDS
T01002
Symbol
Cpsf6, 4733401N12Rik, CFIM, CFIM68, HPBRII-4, HPBRII-7
Name
(RefSeq) cleavage and polyadenylation specific factor 6
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03015
mRNA surveillance pathway
mmu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
432508 (Cpsf6)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
432508 (Cpsf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmu03019
]
432508 (Cpsf6)
Messenger RNA biogenesis [BR:
mmu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
432508 (Cpsf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
432508
NCBI-ProteinID:
NP_001013409
MGI:
1913948
Ensembl:
ENSMUSG00000055531
UniProt:
Q6NVF9
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All DBs
Position
10:complement(117180572..117212903)
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AA seq
551 aa
AA seq
DB search
MADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTV
GDDVGKGAAPNVVYTYTGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRAN
GQSKGFALVGVGSEASSKKLMDLLPKRELHGQSPVVTPCNKQFLSQFEMQSRKTTQSGQM
SGEGKAGPPGGGSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRPP
LGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPV
PGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPA
FFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPPGREMDTARTPLSEAEFEEIMNR
NRAISSSAISRAVSDASAGDYGSAIETLVTAISLIKQSKVSADDRCKVLISSLQDCLHGI
ESKSYGSGSRRERSRERDHSRSREKSRRHKSRSRDRHDDYYRERSRERERHRDRDRDRDR
ERDREREYRHR
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggtgtggaccacatagacatttacgcggatgtgggtgaagagttcaaccag
gaagcagaatatggtggacatgatcagatagatttgtatgatgatgtcatctctccatct
gcaaataatggcgatgccccagaagatcgcgactacatggatactcttccaccaactgtt
ggtgatgatgtgggtaaaggagccgcaccaaacgttgtgtacacttacactgggaagaga
atcgcattgtatattggaaatctaacatggtggacaacagatgaggacctaactgaggcc
gttcattctttgggagtaaatgatattttggagataaaattctttgaaaatcgggcaaat
ggacaatcaaagggatttgcccttgttggtgttggatctgaagcatcttccaaaaagtta
atggatcttttgcctaaaagagaacttcatggtcagagtcctgttgtaactccatgcaat
aagcagttcctgagtcaatttgaaatgcaatccaggaaaactacacagtcaggacagatg
tctggggaagggaaagccggtcctccaggaggcggttcacgcgcagcgtttcctcaaggt
ggtagaggacggggccggtttccaggggctgttcctggtggggacagatttcctgggcca
gcaggaccaggagggccacctccaccttttccagctggacaaactccaccacgtccacct
ttaggcccacctggcccacctggtccaccaggtcctccacctcctggtcaggttctgcca
cctcctctagcaggacctcctaaccgaggagaccgccctccaccaccagttctttttcct
ggacaaccttttgggcagcctccgctgggtccacttcctcctgggcctccacctccagtt
ccaggctacggcccccctccaggtccaccgcctccacagcagggaccacctccacctcca
ggcccctttccacctcgcccaccaggtccactagggcctcccctcacacttgctcctcct
ccacatcttccgggaccacctccaggtgccccgccaccagctccacatgtgaatcctgct
ttttttcctccaccaactaatagtggcatgccaacatcagatagtcgaggtccaccacca
acagacccatatggccgacctcccccatatgataggggtgactacggtccccctgggagg
gaaatggatactgcaagaacacctctgagtgaagctgagtttgaagaaatcatgaataga
aatcgggcaatctcaagcagtgctatttcaagagctgtgtctgacgctagtgctggtgat
tatgggagtgctattgaaacattggtaacagcaatttctttaattaaacaatccaaagtc
tctgcagatgatcgttgcaaagttcttattagctctctgcaggattgccttcatggaatc
gagtccaagtcctatgggtctggatccagacgtgaacgatcaagagaacgggaccatagt
agatcacgggaaaagagtcgtcgccataaatctcggagtagagatcgccacgatgactat
tacagagagagaagcagagaacgagagagacaccgggatcgggaccgcgaccgtgaccga
gagcgtgaccgagagcgagaataccgtcatcgttag
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integrated database retrieval system