Mus musculus (house mouse): 433702
Help
Entry
433702 CDS
T01002
Symbol
Ncbp1, CBP80
Name
(RefSeq) nuclear cap binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03013
Nucleocytoplasmic transport
mmu03015
mRNA surveillance pathway
mmu03040
Spliceosome
mmu05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
433702 (Ncbp1)
09122 Translation
03013 Nucleocytoplasmic transport
433702 (Ncbp1)
03015 mRNA surveillance pathway
433702 (Ncbp1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
433702 (Ncbp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmu03019
]
433702 (Ncbp1)
03041 Spliceosome [BR:
mmu03041
]
433702 (Ncbp1)
Messenger RNA biogenesis [BR:
mmu03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
433702 (Ncbp1)
Spliceosome [BR:
mmu03041
]
Common components
Common spliceosomal components
Cap binding complex
433702 (Ncbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G
MIF4G_like
DUF1690
Cob_adeno_trans
Motif
Other DBs
NCBI-GeneID:
433702
NCBI-ProteinID:
NP_001028373
MGI:
1891840
Ensembl:
ENSMUSG00000028330
UniProt:
Q3UYV9
Structure
PDB
PDBj
LinkDB
All DBs
Position
4:46138732..46172403
Genome browser
AA seq
790 aa
AA seq
DB search
MSRRRHSYENDGGQPHKRRKTSDANETEDHLESLICKVGEKSACSLESNLEGLAGVLEAD
LPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKANN
YNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSLPWV
GKELYEKKDAEMDRIFSTTESYLKRRQKTHVPMLQVWTADKPHPQEEYLDCLWAQIQKLK
KDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEG
PVMPGSHSVERFVIEENLHCIIKSYWKERKTCAAQLVSYPGKNKIPLNYHIVEVIFAELF
QLPAPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMSTTCVDRFINWFSHH
LSNFQFRWSWEDWSDCLTQDLESPKPKFVREVLEKCMRLSYHQHILDIVPPTFSALCPAN
PTCIYKYGDESSNSLPGHSVALCLSVAFKSKATNDEIFSILKDVPNPNQVDDDDEGFRFN
PLKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDKGKLHVLRVMFEVWRNHPQM
IAVLVDKMIRTQIVDCAAVANWIFSSELSRDFTRLFVWEILHSTIRKMNKHVLKIQKELE
EAKEKLARQHKRRSDDDDRSSDRKDGALEEQIERLQEKVEAAQSEQKNLFLVIFQRFIMI
LTEHLVRCETDGTSILTPWYKNCIERLQQIFLQHHQTIQQYMVTLENLLFTAELDPHILA
VFQQFCALQA
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggaggcggcacagctacgagaacgatggtggacaacctcacaaaaggaggaag
acgtctgatgcaaatgaaactgaagatcatttggaatctttaatatgcaaagtaggggaa
aagagtgcctgttctttagagagcaatctcgaaggcctggctggtgttttagaagctgat
cttcctaactacaagagcaagatcttaaggctcctttgtacagttgcacgtctgttacct
gagaagctaacaatttacacaacattagttggactgctgaatgccaggaattacaacttt
ggaggagaatttgtagaagctatgattcgtcaacttaaagaatcactaaaagcaaataac
tataatgaagctgtatatttggtccgttttctgtctgatcttgtgaattgtcatgtgatc
gctgccccgtctatggttgctatgtttgagaattttgtaagtgtaactcaggaagaagat
gtgcctcaagtgcgacgggattggtatgtgtatgcgtttctgtcatccttgccctgggtt
ggaaaggagttgtatgaaaaaaaagatgcagaaatggaccgaatcttctccaccactgaa
agctatctcaaaagacgccagaagactcacgtgcccatgttacaagtctggactgccgac
aaaccacatccacaggaagagtatttagattgcctgtgggcccagattcagaaattgaaa
aaagaccggtggcaggagaggcacatcctaagaccctaccttgcctttgacagcatcctc
tgtgaagctctgcagcacaacctgcctcctttcacaccgccgccccacacagaggactcc
gtgtacccgatgcccagggtcatcttcaggatgtttgactacacagacgacccagaaggc
cctgttatgccagggagccattcggtggagaggtttgtcatcgaggagaatcttcactgc
atcatcaagtcctactggaaggaaaggaagacttgcgctgcccagctggtgagctatcca
gggaagaacaagatccccttgaactaccacatagtggaggtgatctttgcagagctgttt
cagcttccagcgcctcctcacattgacgtgatgtacactacactgctaatcgaactgtgc
aaacttcagccgggctcgctgccccaagtgcttgcgcaggcgactgagatgctgtacatg
cgtctggacacgatgagtaccacgtgtgttgacaggtttattaattggttttctcatcat
ctaagtaattttcaattccgttggagctgggaagattggtcagattgtcttactcaggat
cttgaaagtcccaaaccaaagtttgtaagggaagttctagagaagtgcatgaggttgtct
taccatcaacatatattagatattgttcctcccaccttctcagctctgtgtcctgcaaac
ccaacctgcatttacaagtatggagatgaaagtagcaattctcttcctggacattccgtg
gcactctgtttatctgttgcttttaaaagtaaggcaaccaacgatgagatcttcagcatt
ctgaaggacgtaccaaaccctaaccaggttgatgatgatgatgaagggttcagatttaac
cctttgaaaatagaggtctttgtccagactctgctgcacttagctgccaagtccttcagt
cactccttcagtgctcttgcaaagtttcatgaagtcttcaaaactctggcggagagtgat
aaggggaagctgcacgtgctgagagtcatgtttgaagtgtggaggaaccatccacagatg
attgctgtgctggttgataagatgattcgtacgcagattgtcgactgtgcagcagtagca
aactggatcttctcatcggagctgtctcgggactttacgaggttgtttgtgtgggaaatt
ttgcactctacaattcgtaagatgaacaaacatgttctgaagatccagaaagagctagaa
gaagctaaagagaaactggcgaggcagcacaaacgacgcagtgatgacgacgacaggagc
agtgacaggaaggacggtgccctggaggagcaaatagaaaggctgcaggagaaggtggag
gctgctcagagtgagcagaagaacctcttcctcgtcatcttccagcgtttcatcatgatc
ttgaccgagcacttggtacgatgtgaaacggatgggaccagtatattgaccccgtggtat
aagaactgcatagagaggctgcagcagatcttcctacagcatcaccagaccatccagcag
tacatggtgaccctggagaacctgctcttcacggccgagttagaccctcacatcctggct
gtgttccagcaattctgtgctctgcaggcctaa
Mus musculus (house mouse): 68092
Help
Entry
68092 CDS
T01002
Symbol
Ncbp2, 20kDa, 5930413E18Rik
Name
(RefSeq) nuclear cap binding protein subunit 2
KO
K12883
nuclear cap-binding protein subunit 2
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03013
Nucleocytoplasmic transport
mmu03015
mRNA surveillance pathway
mmu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
68092 (Ncbp2)
09122 Translation
03013 Nucleocytoplasmic transport
68092 (Ncbp2)
03015 mRNA surveillance pathway
68092 (Ncbp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmu03019
]
68092 (Ncbp2)
03041 Spliceosome [BR:
mmu03041
]
68092 (Ncbp2)
Messenger RNA biogenesis [BR:
mmu03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
68092 (Ncbp2)
Spliceosome [BR:
mmu03041
]
Common components
Common spliceosomal components
Cap binding complex
68092 (Ncbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
68092
NCBI-ProteinID:
NP_080830
MGI:
1915342
Ensembl:
ENSMUSG00000022774
UniProt:
Q9CQ49
LinkDB
All DBs
Position
16:31767364..31777290
Genome browser
AA seq
156 aa
AA seq
DB search
MSGGLLKALRSDSYVELSEYRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELF
SKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWDAGFK
EGRQYGRGRSGGQVRDEYREDYDAGRGGYGKLAQKQ
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtggcttactgaaggcgctgcgcagcgactcctacgtggaactcagcgagtac
cgggaccagcactttcggggcgacaatgaagaacaagaaaagttactgaagaaaagctgt
acgttgtatgttggaaatctttccttttatacaactgaagaacagatttatgaactcttc
agcaaaagtggtgatataaagaagatcatcatgggtctggataaaatgaagaaaacagca
tgtgggttctgttttgtggaatactattcaagagcagatgcggagaacgcaatgcggtac
ataaacggaactcgtctggatgaccggatcatacggacagactgggatgcaggctttaag
gagggcaggcagtatggacgtggacggtctgggggtcaggttcgggacgagtatcgggag
gactacgatgctggaagaggcggctatgggaaactggcacaaaaacagtga
DBGET
integrated database retrieval system