Mus musculus (house mouse): 434050
Help
Entry
434050 CDS
T01002
Symbol
Gm5576
Name
(RefSeq) eukaryotic initiation factor 4A-III-like
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03013
Nucleocytoplasmic transport
mmu03015
mRNA surveillance pathway
mmu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
434050 (Gm5576)
09122 Translation
03013 Nucleocytoplasmic transport
434050 (Gm5576)
03015 mRNA surveillance pathway
434050 (Gm5576)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmu03019
]
434050 (Gm5576)
03041 Spliceosome [BR:
mmu03041
]
434050 (Gm5576)
03009 Ribosome biogenesis [BR:
mmu03009
]
434050 (Gm5576)
03012 Translation factors [BR:
mmu03012
]
434050 (Gm5576)
Enzymes [BR:
mmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
434050 (Gm5576)
Messenger RNA biogenesis [BR:
mmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
434050 (Gm5576)
mRNA cycle factors
Stress granule specific factors
434050 (Gm5576)
Spliceosome [BR:
mmu03041
]
Complex C
Other components
EJC/TREX
434050 (Gm5576)
Ribosome biogenesis [BR:
mmu03009
]
Eukaryotic type
90S particles
Helicases
434050 (Gm5576)
Translation factors [BR:
mmu03012
]
Eukaryotic type
Initiation factors
eIF-4
434050 (Gm5576)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_22
AAA_30
Motif
Other DBs
NCBI-GeneID:
434050
NCBI-ProteinID:
XP_036008337
MGI:
3644832
Ensembl:
ENSMUSG00000108045
LinkDB
All DBs
Position
6:78192861..78194152
Genome browser
AA seq
411 aa
AA seq
DB search
MAATATMARSGSARKRLLKEEDMTKVEFETSEEVDRTPTFDTMGLREDLLRGIYAYGFEK
PSAIQQRAIKQIMKGRDVIAQSQSGTGKTATFSISMLQCLDIQVRETQALILAPTRELAV
QIQKGLLTLGDYMNVQCHACIGGTNVDEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA
IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPICIL
VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA
NFTVSSMHGNMPQKERESIMKEFRSGASRVLISTDIWARGLDVPQVSLIINYDLPNNREL
YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcggccacggccacgatggcgaggtctggctcggcgcggaagcggctgctcaaagaa
gaggacatgaccaaagtggagttcgagacgagcgaggaggtggacaggacccccacgttc
gacaccatgggcctgcgagaggacctgctgcgcggcatctacgcctacggttttgaaaaa
ccttcagcgatccagcagcgtgctatcaagcagataatgaaaggcagagatgtcattgca
cagtctcagtctggcacaggcaagacggccaccttcagtatctcaatgctgcagtgcttg
gatatccaggttcgagaaacccaagctttgatcctggctccaaccagagagttagcggta
cagattcagaagggtctgctcactctgggggattacatgaacgtgcagtgccatgcctgc
atcgggggcaccaatgtcgacgaggacatccggaagctggactacgggcagcatgtggtg
gcaggcactccgggacgcgtctttgatatgatccgccggagaagtttacggacacgggct
atcaagatgctggttttggatgaggctgatgaaatgttgaacaaaggtttcaaggagcag
atctacgatgtgtacaggtatttgccaccagccacacaggtcgttctcatcagtgccaca
ctgcctcatgagatcctggagatgaccaacaagttcatgaccgaccccatctgcatcctg
gtgaagcgtgatgagttgactctggaaggcatcaaacagttctttgtggccgtggaaaga
gaggaatggaagtttgatactctatgtgatctctacgacacgctgaccatcacccaggcc
gtcatcttctgcaacaccaagaggaaggttgactggctcacagagaaaatgagagaagcc
aatttcactgtgtcatccatgcatggaaacatgccccagaaagaacgagagtctatcatg
aaggagttccggtcaggtgccagccgggtgctcatctccacagacatctgggctcggggc
ctggatgtccctcaggtgtccctcatcattaactatgacctgcccaacaacagagaactg
tacattcacagaattgggagatcgggtcggtatggacgaaaaggtgtggccatcaatttt
gtgaagaatgatgacatccggattctcagggacatcgagcagtactactccacccagata
gacgagatgcccatgaacgtggctgacctcatctga
DBGET
integrated database retrieval system
