Mus musculus (house mouse): 434341
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Entry
434341 CDS
T01002
Symbol
Nlrc5, NOD27
Name
(RefSeq) NLR family, CARD domain containing 5
KO
K22615
NLR family CARD domain containing 5
Organism
mmu
Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mmu04054
]
434341 (Nlrc5)
Pattern recognition receptors [BR:
mmu04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
434341 (Nlrc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Atypical_Card
LRR_6
NACHT
LRR_4
NLRC4_HD2
LRR_8
LRR_NXF1-5
AAA_16
NOD2_WH
AAA
nSTAND3
Motif
Other DBs
NCBI-GeneID:
434341
NCBI-ProteinID:
NP_001028379
MGI:
3612191
Ensembl:
ENSMUSG00000074151
UniProt:
C3VPR6
Structure
PDB
PDBj
LinkDB
All DBs
Position
8:95160963..95253900
Genome browser
AA seq
1915 aa
AA seq
DB search
MDAESIRLNNENLWAWLVRLLSKNPEWLSAKLRSFLPTMDLDCSYEPSNPEVIHRQLNRL
FAQGMATWKSFINDLCFELDVPLDMEIPLVSIWGPRDEFSKQLGAGEESCPGPQLYHGAK
RPFQSYGSSPRRKNSKKQQLELAKKYLKLLKTSAQQWHGGVCPGAWLTPHSPQTYIPPVL
QWSRATAPLDAQEGATLGDPEAADNIDVSIQDLFSFKAHKGPRVTVLLGKAGMGKTTLAY
RLRWRWAQGQLDRFQALFLFEFRQLNMITQLPTLPQLLFDLYLMPESEPDAVFQYLKENA
QEVLLIFDGLDEALHADSVGTDNAGSALTLFSELCHGNLLPGCWVMTTSRPGKLPSCVPT
EAATVHMWGFDGLRVEKYVTCFFSDLLSQELALKEMRTNARLRGMCAIPALCTVTCFCLR
RLLPGSSPGQSAALLPTITQLYLQMVETFSPSETLLDTSILGFGKVALRGLDTGKVVFSV
EDISPQLMSFGAVHSLLTSFCIHTRPGHEEIGYAFVHLSLQEFFAALYLMASHTVDKDTL
VEYVTLNSHWVLRTKGRLGLSDHLPAFLAGLASHTCHMFLCQLAQQDRAWVGSRQAAVIQ
VLRKLASRKLTGPKMIELYHCVAETQDLELARFTAQSLPSRLSFHNFPLTHADLAALANI
LEHRDDPIHLDFDGCPLEPHCPEALVGCGQVENLSFKSRKCGDAFAEALCRSLPTMGSLK
TLGLTGSRITAQGISHLIQTLPLCSQLEEVSLHDNQLKDPEVLSLVELLPSLPKLQKLDL
SRNSFSRSILLSLVKVAITCPTVRKLQVRELDLIFYLSPVTETATQQSGASDVQGKDSLK
EGQSRSLQLRLQKCQLRIRDAEALVELFQKSPQLEEVNLSGNHLEDDGCRLVAEAASQLH
IAQKLDLSDNGLSQTGVTYVLKAMSTCGTLEDLHISLLNNTVVLTFAQEPREQEGSCKGR
APLISFVSPVTSELSQRSRRIRLTHCGFLAKHTETLCEALRASCQTHNLDHLDLSDNSLG
GKGVILLTELLPGLGPLKSLNLSRNGLSMDAVFSLVQCLSSLQWVFHLDVSLESDCIFLR
GAGTSRDALEPKFQTGVQVLELSQRYTSRSFCLQECQLEPTSLTFLCATLEKSPGPLEVQ
LSCKSLSDDSLKILLQCLPQLPQLSLLQLRHTVLSSRSPFLLADIFNLCPRVRKVTLRSL
CHAVLHFDSNEEQEGVCCGFPGCSLSQEHMETLCCALSKCNALSQLDLTDNLLGDIGLRC
LLECLPQLPISGWLDLSHNNISQEGILYLLETLPSYPNIQEVSVSLSSEQIFRMCFSKKE
GAGTSLRLCECSFSPEQVSKLASSLSQAQQLTELWLTKCHLDLPQLTMLLNLVNRPTGLL
GLRLEEPWVDSVSLPALMEVCAQASGCLTELSISEIQRKLWLQLEFPHQEGNSDSMALRL
AHCDLETEHSHLMIQLVETYARLQQLSLSQVSFNDNDGTSSKLLQNILLSSCELKSFRLT
FSQVSTKSLTHLAFGLGHCHHLEELDFSNNSLREEDTELLMGALQGTCRLKKLHLSFLPL
GASSLALLIQGLSRMTLLQDLCLSHNQIGDVGTQCLAAILPKLPELRKFDLSHNQIGDVG
TQCLAAILPKLPELRKFNLSHNQIGHVGTQCLAAILPKLPELRKFDLSRNQIGDVGTQCL
AAILPKLPELRKFDLSGNRIGPAGGVQLVKSLTHFEHLEEIKLGNNALGEPTALELAQRL
PPQLRVLCLPSSHLGPEGALGLAQALEQCPHIEEVSLAENNLAGGVPRFSKRLPLLRQID
LEFCKIEDQAARHLAANLTLFPALEKLLLSGNLLGDEVAAELAQVLPQMGQLKKVNLEWN
RITARGAQLLAQGLVQGSCVPVIRLWNNPILNDVAQSLQSQEPRLDFSITDQQTL
NT seq
5748 nt
NT seq
+upstream
nt +downstream
nt
atggacgctgagagcatccgactgaacaatgaaaacctgtgggcctggcttgtgaggctg
ctgagcaaaaacccagaatggctgagtgccaagcttaggtccttcctcccgaccatggac
ctggactgcagctatgagccctccaaccctgaggtcatccaccgtcagctcaacaggctg
ttcgcccaaggcatggccacctggaagtctttcatcaatgatctgtgcttcgagcttgat
gtacctttggacatggagataccactagtgagcatctggggcccaagagatgaattctct
aagcagctaggggcaggagaggagagctgccctggacctcagctgtaccatggtgccaaa
cgtccttttcagagctatgggtcctcaccccgtcggaagaacagcaagaagcagcagctc
gagttggccaagaagtatctgaagctcctgaagacctctgcccaacagtggcatggtggt
gtgtgcccaggagcatggcttactcctcactccccacagacctacatccccccagttctt
cagtggagccgggctacagcacccttggatgctcaggagggagccactttaggagaccct
gaagcagccgacaacattgatgtgagcatccaggatctcttcagcttcaaggctcacaag
ggacctcgagtgacagtactactgggaaaggctgggatgggtaagaccactctggcatat
cggctccgctggaggtgggctcaaggtcagctggaccgcttccaggctctgttcctgttt
gagttccgccagctcaacatgatcacacagttgccgaccctgccccagctcctctttgat
ctgtacttgatgccagagtcagagcctgatgctgtttttcagtacctaaaggagaatgct
caggaagtcctactgatctttgatgggttggatgaggctctccatgctgattctgtgggt
actgacaatgcaggctcggccctcaccctcttttctgaactctgccatgggaacctcctg
ccaggctgctgggtgatgaccacctcccgtcctgggaaactgccttcctgtgtgcccaca
gaagcagccacggtacacatgtggggctttgatgggctacgagtagagaagtatgttacc
tgcttcttcagtgatcttctgtctcaggaattggccttgaaggaaatgagaaccaatgca
cgtctccggggtatgtgtgcaatacctgcgttgtgcacagtcacctgcttctgccttcgc
cgtctgcttcctggaagctccccagggcagtctgcagccctcctgcccaccataacccag
ttgtacctgcagatggtggaaacttttagccccagtgagactctgcttgacacatccatt
ttgggctttggaaaggtggcccttaggggactggacactgggaaagtcgtcttctctgtg
gaagacatctctccccaactgatgtcttttggagctgtccacagcctcctgacctccttc
tgtatccacacccgccctgggcatgaagaaataggctatgcttttgtccaccttagcctg
caggagttctttgctgctctgtatctgatggccagtcacacagtggacaaagacacactc
gtcgagtatgtcaccctcaattcccactgggtgctgaggaccaaaggtagactgggcctc
tcggatcatctccctgccttcctggcaggcctagcctcccacacctgccacatgttcctc
tgccaactggctcagcaagacagagcctgggtgggctccaggcaggccgctgtgatccag
gtgctaaggaagttggctagccggaaactcacagggccaaagatgatagagttgtatcac
tgtgtggctgagacccaggatctggagctggcgaggttcactgcccaaagccttccttcc
cgcctctccttccacaatttccctctgacccatgcagacctggctgcactggctaacatt
ttggagcacagggatgatcccattcacctggattttgacggctgcccactggagccccac
tgcccagaggctctggtaggatgtgggcaggtggagaatctcagctttaaaagcagaaag
tgtggggatgcctttgcagaagccctctgcaggagtttgcctactatggggagcctgaag
acgctggggttaacaggaagtaggattacagcccaaggcatcagccacctgatacagaca
ttgcccctctgttcccagctggaggaggtcagtttgcatgacaaccagctcaaggaccca
gaggtgctgagtcttgtggagctgcttccctccctgccgaagctccagaaacttgacctg
agccgaaacagcttctccaggtcaatcctcctgtctttggtgaaagtggctatcacatgt
cctactgtcaggaagctgcaggtcagggaattggacctcatcttctatctgtccccagtc
acagagacagctacacagcaatcaggagcatcagatgtacagggcaaagacagcctgaag
gaaggacagagtcgaagcctgcaactcaggcttcagaaatgtcagctcaggatccgtgat
gcagaagcccttgtggagctattccagaaaagcccccagctggaggaagtgaatctttca
gggaaccatttggaagatgatggctgtcgacttgtggcagaggctgcttcacagcttcac
attgcccagaaactggacctcagcgacaatggcctctctcagactggggtgacctatgtg
ttgaaagccatgagcacatgtgggaccctggaagacctgcacatcagcctgctaaacaac
accgtggtactcacatttgcccaggagccgagggagcaggaggggagctgcaaggggagg
gcaccacttatcagcttcgtgtctcctgtgacctccgagttgtcccagagatctcgaagg
atcaggctgacacactgtggcttcctggccaagcacacagagacgctctgtgaggcactg
agagccagctgccagacccacaacctggatcatcttgacctatcagacaactctttgggg
ggcaaaggagtgatcctgctaaccgagctgctcccaggactgggtcccctgaagtccttg
aacctcagcaggaatggcttgtccatggatgctgtctttagcttggtccagtgtctgtct
tccctgcagtgggtgttccacttagatgtcagccttgagagtgactgcatcttccttcga
ggagctgggaccagcagggatgcactagaaccaaaattccagactggagtccaggtactg
gagctgagtcagcggtacacctcccggagcttctgccttcaagagtgtcagttggaaccc
acgagccttaccttcctctgtgccactctggagaagagcccagggcctctggaagtccaa
ttgtcctgcaagtccctgagtgatgacagcctgaagatcctgctgcagtgcctgccccag
ctgcctcagctcagcctgctgcagctgagacacacagtcctatcttcaagaagccccttc
ctgctggctgacatcttcaacctgtgcccacgggttcggaaggtcactctcaggtcccta
tgtcatgctgttctgcactttgactccaatgaggaacaagagggtgtgtgctgtggcttc
ccgggatgcagcctcagccaggagcatatggaaacactgtgctgtgcactgagcaagtgc
aatgccctcagccagcttgatctcacagacaatctgctgggtgacatcgggctcaggtgc
cttctggagtgcctgccacagctgcccatctctgggtggcttgacctcagtcacaacaat
atctctcaggaagggatcctgtacctgctggagactctgccttcctaccctaatatccaa
gaggtctctgtgagtctgagctctgagcagatcttccgaatgtgcttctccaaaaaggaa
ggagccgggacatcgctgaggctatgtgaatgcagcttcagcccagaacaagtatccaaa
ttggcttccagcctgagccaggcccaacagctcacagagctctggctgaccaagtgtcac
ttggacctgccacagctgaccatgctcctgaacctggtgaatcggccaacagggttgctg
ggcctcaggttggaagagccctgggtggactctgtcagcttaccagctctaatggaagtc
tgtgcccaggcctcaggatgtctcactgagttaagcatctctgagatccaaaggaagttg
tggctccagctggaatttcctcaccaagaaggcaattctgattccatggctctcaggttg
gctcactgtgacctggagaccgagcacagccatcttatgatacagttggtggagacatat
gccagactgcagcagctgagcttgtctcaggttagcttcaatgacaatgatggcaccagc
tccaagctgctgcagaacatcctgctatcaagctgtgagctgaagagcttcaggctgacc
ttcagccaagtgagcacaaagagcctcacccatctggcatttggtctgggacactgccac
catctggaagagctggacttctctaacaacagtctccgtgaggaggacacagagctactg
atgggagcccttcagggaacctgcagactgaagaagctgcaccttagtttcttaccattg
ggagcctcctctctggccttgctcattcaaggactaagccgaatgactctactacaggac
ctttgcttgagtcacaaccagatcggagatgtgggtacccagtgcttagctgccatcttg
ccaaaactgccagaactcaggaaatttgacttgagtcacaaccagatcggagatgtgggt
acccagtgcttagctgccatcttgccaaaacttccagaactcaggaaatttaacttgagt
cacaaccagatcggacatgtgggtacccagtgcttagctgccatcttgccaaaacttcca
gaactcaggaaatttgacttgagtcgcaaccagatcggagatgtgggtacccagtgctta
gctgccatcttgccaaaacttccagaactcaggaagtttgacctctcagggaacaggatt
ggcccagctgggggagtgcagctggtgaagtctctcacccatttcgagcacttggaggag
atcaaactgggcaacaatgctctgggggagcccacagccctggagctggctcagagattg
cccccacaactcagggtcctgtgcctgccatccagtcatctgggtccagagggggccctg
ggcctggcccaggccctggagcaatgcccacacatagaagaggtcagcttggcagagaat
aacctggctggaggtgtcccacgtttctccaagaggctcccactgcttagacaaattgac
ctggagttctgcaagattgaagaccaagctgccaggcaccttgctgccaacctcacactc
ttcccagccctggagaaactcttgctgtccgggaatctccttggagatgaggtggctgct
gagttggcccaggtcctgccgcagatgggacagctgaagaaagtgaacttggagtggaac
cggatcacagcacgtggagcccaactcctggctcaagggctggtccagggatcctgcgtc
ccagtcattcgcctctggaacaaccccattcttaacgatgtggcccagagtctgcagagc
caggaacccaggctggacttctccatcactgaccagcagactctttga
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integrated database retrieval system
