Mus musculus (house mouse): 51796
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Entry
51796 CDS
T01002
Symbol
Srrm1, POP101, Srm160
Name
(RefSeq) serine/arginine repetitive matrix 1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03013
Nucleocytoplasmic transport
mmu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
51796 (Srrm1)
03015 mRNA surveillance pathway
51796 (Srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmu03019
]
51796 (Srrm1)
03041 Spliceosome [BR:
mmu03041
]
51796 (Srrm1)
Messenger RNA biogenesis [BR:
mmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
51796 (Srrm1)
Spliceosome [BR:
mmu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
51796 (Srrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
51796
NCBI-ProteinID:
NP_058079
MGI:
1858303
Ensembl:
ENSMUSG00000028809
UniProt:
Q52KI8
E9PUK6
LinkDB
All DBs
Position
4:complement(135047795..135080787)
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AA seq
923 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASLKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSP
SPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKSPELPEPSVRMKDSSVQEATS
TSDILKAPKPEPVPEPKEPSPEKNSKKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRH
RSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPGRRRRRSSASLSGSSSSS
SSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSSPATPPPKTRHSPTPQQSNR
TRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGSKMAAADSVQQR
RQYRRQNQQSSSDSGSSSTSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSP
RMQMGKRWQSPVTKSSRRRRSPSPPPARRRRSPSPAPPPPPPPPPPRRRRSPTPPPRRRT
PSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPP
KQRSPTVTKRRSPSLSSKHRKGSSPGRSTREARSPQPNKRHSPSPRPRAPQTSSPPPVRR
GASASPQGRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAK
KPPAPPSPVQSQSPSTNWSPAVPAKKAKSPTPSLSPARNSDQEGGGKKKKKKKDKKHKKD
KKHKKHKKHKKEKAVTIATPATAAPAAVSAATTTSAQEEPAAAPEPRKETESEAEDDNLD
DLERHLREKALRSMRKAQVSPQS
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggaacaagtgcggagcaggataatcggttcagcaacaaa
cagaagaaactcctcaagcagctgaaatttgcagaatgcttagaaaaaaaggtggacatg
agcaaagtaaatttggaggttataaagccttggataaccaaaagagtaactgagatcctt
ggattcgaagatgatgttgtcattgagtttatattcaaccagctggaagtgaagaaccca
gattccaaaatgatgcaaatcaacctgactgggtttttgaatgggaagaatgctagagaa
ttcatgggagagctgtggcccctgctgttgagtgcacaagaaaatatcgccggaatccct
tctgctttcctagagttgaagaaggaagagataaagcagagacaaattgaacaagaaaaa
ttggcgtctctgaaaaaacaagatgaagataaagataagagggataaggaagaaaaggaa
agcagcagagagaagagggagcggtctcgcagcccaagaagacgcaaatccagatctcct
tcccctagaagacgatcttcccctgtcaggagagagagaaagcgcagtcactctcgatct
ccccgtcacagaaccaagagccggagcccttcccctgccccagaaaagaaggagaaatct
ccagagctcccagagccatccgtgaggatgaaggactcctcagtacaggaggccacctct
acaagtgacatcttgaaagctcccaagcctgagcctgtaccagagcccaaagaaccgtct
ccagaaaaaaattccaaaaaggaaaaggaaaagactcgaccaagatctcggtcacgatcc
aaatctcggtctcggacccgatctcgatcaccttctcatactagaccaagacggagacat
agatcccgatcaagatcatactctcctagaaggcggccaagcccaagacgacgaccatct
ccccgaagaagaactccaccaagacggatgcctcctccaccaaggcaccggaggagtagg
tctccagggagacgaaggaggcgttcttccgcatccctgtctggaagtagctcgtcgtcc
tcttcatctcgttcccggtcaccaccaaagaaacctcccaagaggacatccagccctcct
cggaaaacgcgtaggttatcaccttcagcaagtcctccacggcgaagacaccggccgtca
tctccagcaactccgccacccaaaactcgccattccccaactccccagcagtcaaaccgt
acaagaaaaagtcgtgtttctgtgtctccaggaagaacctccggtaaagtgacaaaacat
aaaggtactgagaaaagagagtcaccttctccagcacccaagcctagaaaagtggagctg
tctgagtctgaagaagacaaaggcagcaaaatggctgcagctgattctgtgcagcagaga
agacaataccgacggcagaaccagcagtcttcatctgactctggctcctcttccacctca
gaagatgagcggcccaagagatcccatgtaaagaacggtgaggtaggcaggcggcggaga
cattccccttctcggagtgcctctccatcacctcgaaagcgccagaaagagacttcccct
cggatgcagatgggaaagcgatggcagtcaccagtgactaaaagtagtagaaggaggaga
agtccctctccccctcctgccagaaggcgaaggtctccttctccagcccctccgccgcca
cctccccctcctcctcctcggcggcgcagatctcccaccccaccaccacgacgaaggacc
ccttctcctcccccacgccgccgctcaccgtctccaagaagatactctcctcccattcag
aggagatactctccttccccccctccaaagaggagaaccgcctcccccccgcccccgccc
aagcgaagggcatcaccatctccaccaccaaagcgccgggtctcccactctccacctcct
aaacaaagaagccccacagtcaccaagagacgctcgccctccttatcttcaaaacatagg
aaagggtcttccccaggccgatccacccgggaggcccgctcaccacaaccaaacaaacgg
cattcgccctcaccacggcctcgggctcctcagacctcaagccctccccctgtacgaaga
ggagcttcagcgtcaccccaaggaaggcagtccccatctccaagtactaggcctattagg
agagtctccaggaccccggagcccaaaaagataaaaaaggctgcctcaccaagccctcag
tccgtaagaagggtttcatcttccagatctgtctctggatctcctgagccagcagctaaa
aagccgccagcacctccctctcctgtgcagtctcagtcaccctccacaaactggtcacct
gcagtaccagccaaaaaggctaagagcccaacaccaagcctgtcccctgcccggaattct
gatcaagaaggaggtgggaagaaaaagaagaagaagaaggacaagaaacacaagaaggat
aagaaacacaagaagcacaaaaaacacaagaaggagaaggctgtgaccatagccacccca
gctactgcagcccctgcagctgtttctgctgccaccaccacatcagcacaggaagagcct
gcagcagcaccagagcccaggaaggagactgagagtgaagctgaagatgacaaccttgat
gacctagagaggcacctgcgggagaaggccctgcggtccatgcggaaggctcaagtgtcc
ccacagtcctaa
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