Mus musculus (house mouse): 51810
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Entry
51810 CDS
T01002
Symbol
Hnrnpu, Hnrpu, SAFA, Sp120, hnRNP_U
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U
KO
K12888
heterogeneous nuclear ribonucleoprotein U
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
51810 (Hnrnpu)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmu03041
]
51810 (Hnrnpu)
Spliceosome [BR:
mmu03041
]
Common components
Common spliceosomal components
hnRNP proteins
51810 (Hnrnpu)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SPRY
SAP
SRP54
AAA_18
Motif
Other DBs
NCBI-GeneID:
51810
NCBI-ProteinID:
NP_058085
MGI:
1858195
Ensembl:
ENSMUSG00000039630
UniProt:
Q8VEK3
LinkDB
All DBs
Position
1:complement(178148673..178170063)
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AA seq
800 aa
AA seq
DB search
MSSSPVNVKKLKVSELKEELKKRRLSDKGLKADLMDRLQAALDNEAGGRPAMEPGNGSLD
LGGDAAGRSGAGLEQEAAAGAEDDEEEEGIAALDGDQMELGEENGAAGAADAGAMEEEEA
ASEDENGDDQGFQEGEDELGDEEEGAGDENGHGEQQSQPPAAAAQQQPSQQRGAGKEAAG
KSSGPTSLFAVTVAPPGARQGQQQAGGDGKTEQKGGDKKRGVKRPREDHGRGYFEYIEEN
KYSRAKSPQPPVEEEDEHFDDTVVCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGR
ASYGVSKGKVCFEMKVTEKIPVRHLYTKDIDIHEVRIGWSLTTSGMLLGEEEFSYGYSLK
GIKTCNCETEDYGEKFDENDVITCFANFETDEVELSYAKNGQDLGVAFKISKEVLADRPL
FPHVLCHNCAVEFNFGQKEKPYFPIPEDCTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIG
LPGAGKTTWVTKHAAENPGKYNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLG
KFIEIAARKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVE
GKDLPEHAVLKMKGNFTLPEVAECFDEITYVELQKEEAQKLLEQYKEESKKALPPEKKQN
TGSKKSNKNKSGKNQFNRGGGHRGRGGFNMRGGNFRGGAPGNRGGYNRRGNMPQRGGGGG
SGGIGYPYPRGPVFPGRGGYSNRGNYNRGGMPNRGNYNQNFRGRGNNRGYKNQSQGYNQW
QQGQFWGQKPWSQHYHQGYY
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttcgcctgttaatgtcaagaagctgaaggtgtcggagctgaaggaggagctc
aagaagcggcgcctctccgacaagggcctcaaggccgatctcatggatcgactccaggcc
gcgctggacaacgaggcaggaggccgccccgccatggagcccgggaacggcagtctcgac
ctaggtggcgatgcggccgggcgctcgggagcgggcctagagcaggaggccgcggctggc
gccgaagacgacgaggaggaggagggcatcgccgctctggacggcgaccagatggagctg
ggcgaggagaacggggcggcgggggcggctgacgccggcgcgatggaggaagaggaggca
gcgtcggaagacgagaacggcgacgaccagggcttccaggagggggaagacgagctcggc
gacgaggaggagggcgcgggcgacgagaacggtcacggggagcagcagtcccaaccgccg
gcagcggcggcgcagcagcagccttcccagcagcgtggtgccggcaaggaggccgcgggc
aagagcagcggccccacctcgctcttcgcggtgacggtggcgccgccaggggcgaggcag
ggccaacagcaggcgggaggagacggcaaaacagaacagaaaggtggagataaaaagaga
ggcgttaaaagaccgcgagaagatcatggccgagggtattttgagtacatcgaagaaaac
aagtacagcagagccaagtctcctcagccacctgttgaagaagaagacgaacacttcgat
gacacagtggtttgtcttgatacttataattgtgatctgcattttaaaatctcgagagac
cgtctgagtgcttcttcccttactatggagagttttgctttcctgtgggctggaggaaga
gcttcctacggtgtgtcaaaaggcaaagtctgctttgagatgaaggtaacagagaagatt
ccagtaagacacttatatacaaaagatattgatatacatgaagttcggattggctggtca
ctaaccacaagtggaatgttgcttggtgaagaagaattttcttacgggtattctctgaaa
ggaataaaaacatgcaactgtgagacagaagattatggggagaagtttgatgaaaatgat
gtgattacatgctttgctaactttgaaactgatgaagttgaactctcttatgcgaagaat
ggacaagatcttggtgttgcctttaagatcagtaaggaagttcttgctgaccggccacta
ttcccacatgttctctgccataactgtgcagttgaatttaatttcggtcaaaaggaaaag
ccatactttccaatacctgaagactgtacttttatccaaaatgtccccttagaggaccga
gttagaggaccaaaaggacctgaagagaagaaggattgtgaggttgtaatgatgattggc
ttgccaggagctggaaaaactacctgggttactaaacatgcagctgaaaaccctgggaaa
tacaacattcttggaacaaatacgattatggacaagatgatggtggcaggttttaagaag
caaatggcagatactggaaaactgaacacactgttgcagagagccccacagtgtcttggc
aagtttattgaaattgctgcccgtaagaagcgaaattttattctggatcagacaaatgtg
tctgctgctgcccagagaagaaaaatgtgcctgtttgcaggcttccagcggaaagctgtt
gtagtgtgcccaaaagatgaagactataagcagaggacacagaagaaggcagaagtagag
gggaaggacctaccagaacatgctgtcctcaagatgaaaggaaacttcacccttccagag
gttgcagaatgctttgatgaaataacctatgttgaacttcagaaagaggaagcccaaaag
cttttggagcaatataaagaagaaagcaaaaaggcactgccaccagaaaagaagcaaaac
actggctcaaagaaaagcaataagaataagagtggcaagaaccagttcaacagaggtggt
ggccatagaggccgtggaggattcaatatgcgaggtggcaatttcagaggaggagctcct
gggaatcgtggtggatataataggagaggcaacatgccacagagaggtggtggcggtgga
agtggtggaattggctatccatacccacgtggccctgtttttcctggccgaggtggttac
tcaaacagagggaattacaacagaggtggaatgcccaacagagggaactataaccagaac
ttcagaggacgaggaaataatcgtggctacaaaaatcaatctcagggctacaatcagtgg
cagcagggtcaattctggggtcagaagccatggagtcagcattatcaccaaggatattat
tga
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