Mus musculus (house mouse): 51869
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Entry
51869 CDS
T01002
Symbol
Rif1, 5730435J01Rik, 6530403D07Rik, D2Ertd145e
Name
(RefSeq) replication timing regulatory factor 1
KO
K11138
telomere-associated protein RIF1
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
51869 (Rif1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmu03032
]
51869 (Rif1)
DNA replication proteins [BR:
mmu03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
51869 (Rif1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rif1_N
Motif
Other DBs
NCBI-GeneID:
51869
NCBI-ProteinID:
NP_780447
MGI:
1098622
Ensembl:
ENSMUSG00000036202
UniProt:
Q6PR54
LinkDB
All DBs
Position
2:51962725..52016781
Genome browser
AA seq
2426 aa
AA seq
DB search
MTAPGRSPLEPLLETWEDPSVPPGEQTDAYLTLTSRMTGEEGKEVIAEIEKNLSRLYTVL
KAHISSQNSELSSAALQALGFCLYNPRITSGLSEANIQELLLTLNGIIKSSDKNVCTRAL
WVISKQTFPAELVSKMVSSIIDSLEVILSKGEIHSAVVDFEALNVIISHWFLHCRLIEQA
PVQMGEESVRWAKLVIPLVVHSAQKVHLRGATALEMGMPLLLQKQQEIALITEHLMTTKL
ISELQKLFKNKNETYVLKLWPLFVKLLGKTLHRSGSFINSLLQLEELGFRSGTPMIKKIA
FIAWKSLIDNFALNPDILCSAKRLKLLMQPLSSIHVRTETLALTKLEVWWYLLMRLGPQL
PANFEQVCVPLIQSTISVDSIPSPQGNSSRGSASPGLSPLTPGHKGASPYGSPRGNLSSN
TGGMAAIPSIQLLGLEMMLHFLLGPEVLSFAKQHKIVLSLEPLEHPLISSPSFFSKYAHT
LITAVHDSFVSVGKDASDAVVSAIWKELISLVKSVTEAGNRKEKSGSEVLTLLLKSLENI
VKSEVFPVSKTLVLMEITVKGLPPKVLGSPAYQVANMDILNGTPALFLIQLIFNNNLLEC
GVEDEKFFLNLETLVGCVLSGPTSPLAFSDSVLTVINQNAKQLVNKEHLWRMWSMIVSPL
TDVIHQTNEVNQGDALEHNFSAIYGALTLPINHIFSAQTFPTGTMKALLKTWSELYRAFT
RCASLVATAEENLCCEELSSKIMCSLEDEVLSDLLFLDRISHIIIVMVDCIDFSPYNKKY
QPKIKSPQRSSDWSRKKKEPLGKLASLFKLIVKVIDTFHTLSLKETFSDTLLAIGNSIIS
MLSNVFGHISLPSMIREIFATFTRPLALLYENSKLDEAPKVYTSLNNKLEKLLGEIVACL
QFSYLGAYDSELLEHLSPLLCVIFLHKNKQIRKQSALLWNATFAKATALVYPEELKPILR
QAKQKILLLLPGLENVEMMDESSEPYSESTENSQLNVKISGMERKSSGKRDSILAHTKDK
KKKVKLSAKLKLESSSPKIKSGKLLEEEKSTDFVFIPPEGKETKARVLTEHQKEVLKTKR
CDIPALYNNLDASQDTLFSAQFSQEESMESLTLTEKPKEDAKIIKEEQMESTIFIHQDAP
ENCGIDEHSENASLPNCGGSVAETNPETLITGFDARKEVLISSKILSAESSSSTETSVVS
SSSVSNATFSGTPPQPTSRRQTFITLEKFDGSETRPFSPSPLNNISSTVTVRNNQDNTTN
TDMPPKARKREVTNSKSDSENLANAGKKSSRRWSKAEQSVTKKSKPSLTSEQEEHSSENN
SPDLLSPTEHVSENDDHPSEATLEHKDGDPKPAVENASLEDLTTEEKNVGINMESKESTA
SVVARTEQIVNEDSQAAALAPNPKTLRRSSRRRSEAVDSCSDSQERESGQQKKERRKEEE
KIISKSPLRIKDDKLPTQKLTDESPIQENLTEKGNTLPERTSGEPSVNAEIDQNRRKPDL
ENVSSEGGGGTLDNLDKSSEKPLRGRTRYQTRRASQGLISAVENSESDSSEAKEEVSRKK
RSGKWKNRSSDSVDIEEQEEKKAEEEVMKTANQTLDGQAVPDVDVNAAAQVCEKSTNNNR
VILQDSAGPADSLQAPPKGEEKSKINKCVDSSFVSLPVPESNLRTRNASKRLLYKQDNDS
NVRVSDSSLSPEKFTQVECQHKRSRRVRRSKSCDCCGEKSQSQEKSFIGLKNTESYAIKS
VEKKKTDLQVPETAPETREARDHAETKLAGEEPLVNFHVGLKEENCTTGDSVKSEAELQE
ASLPPEIVTVKEKTYDTDASEAVSEIQGPCSENHSPAEDPGLSECKDISQKQLSENGELD
ISDVGKACKVIAGSSPEGVETMELNVRNDAFVAADSEKSTQMDVSVDVATEEDNKKDECE
AVTTEVNVEGVATEDFNSGMDLSDTPIPVSKDVETEHAASGEIEGESNESDSGSCEEMNK
EMGSHKAQMSTEIDSARVKETDILASASKSEEALIGRLDVNTQSFVSDIEMSSGERTVNC
KTETSIELNKLDEAKLSGNEATVGNDTLQEVCFTSEKVEKLPQCLLVQVASELGAESNTT
SPEKLELDSFGSVNESPSGMQQARCVWSPLASPSTSILKRGLKRSQEDEISPVNKIRRVS
FADPIYQAGLADDIDRRCSVVRSHSSNSSPIIKSVKTSPTSHSKHNTTSAKGFLSPGSQS
SKFKSPKKCLITEMAQESMLSPTESVYPALVNCAASVDIILPQITSNMWARGLGQLIRAK
NIKTIGDLSTLTASEIKTLPIRSPKVFNVKKALRVYHEQQMKSRGLEEIPIFDISEKAVN
GVESRTVSTDEERFASDLIEPVTLDTPLSKNLVAQISALALQLDSEDLYSYTGSQLFEMH
EKLGTMANSIIRNLQSRWRSPAHENS
NT seq
7281 nt
NT seq
+upstream
nt +downstream
nt
atgacggccccaggtcgcagccccctggagccgcttctggagacttgggaagacccctcg
gtgcctccgggagagcagacggacgcctacctaactctgaccagtcgtatgactggagaa
gaaggaaaagaagtcattgcagaaatcgagaaaaacctttctcggctgtacacggtttta
aaggctcacatttccagtcagaactcagaactgagcagtgctgctttgcaagccttggga
ttttgtttatataatcccagaattacctcaggattgtcagaggcaaatattcaagaactg
cttttaaccttgaatggtatcattaagagttcagacaaaaatgtgtgtaccagggcactg
tgggtaatatccaaacagacgtttcctgctgaacttgttagcaaaatggtatccagtatt
attgattcattggaagtgatactaagtaaaggagagatacattctgctgttgttgatttt
gaagcattaaatgttattataagtcattggtttcttcattgtaggctaattgaacaagcc
ccagttcaaatgggagaagagtctgtgaggtgggccaaattggtcataccattagttgtt
cactcagcacaaaaagtacatttgcggggagccactgctctagagatggggatgccattg
ctgcttcagaaacaacaagaaatagccttgattacagagcaccttatgactactaaatta
atctcagaactccaaaaactatttaagaataaaaatgagacttatgtgttaaaactatgg
cctttgtttgtcaaacttcttggaaagaccttgcaccgaagtgggagtttcatcaactct
ttgttacagctggaagaactgggcttccgtagtggaacacccatgattaaaaaaatcgct
ttcattgcttggaaaagcttaatagataattttgctttaaacccagatatactttgtagt
gcaaaaagactgaagttgttaatgcaacccttgagttccatccatgtgagaacagaaact
ttagcattaacaaaactagaagtctggtggtatttactgatgagacttggacctcagctc
cctgccaattttgaacaggtgtgcgtgccactgattcagagtacaataagtgttgatagt
attccttcacctcaaggcaattcatctcgagggtctgcttctccaggcttaagtccactg
actccgggacataaaggtgcttctccttatggaagtccccgtgggaacctgagttcaaat
acaggtggaatggctgcaatcccttctattcagcttttgggactggaaatgatgcttcat
tttttgttgggcccagaagttttgagttttgccaagcaacacaagattgtattgagttta
gagccactggaacacccgctaatcagcagcccttctttcttctccaagtatgcgcataca
cttatcactgctgttcatgatagctttgtctcagttggaaaggatgcctcagatgcagta
gtcagtgctatctggaaggagctaattagcttggtgaagtcagttactgaagcaggaaac
agaaaagaaaaatcaggttctgaagttttgacccttctactaaaatctttggaaaacata
gtgaagtcagaagtatttcctgtatcaaaaacactggttctcatggaaattacagttaaa
ggacttcctccgaaagtactaggttcaccagcatatcaggttgctaatatggatattctt
aatggaactccagcattgtttttaatccagttaattttcaacaacaatcttttagaatgt
ggtgtagaagatgagaagttttttctcaatctagaaacacttgtaggctgtgtactttct
ggtccaacatcaccactggcttttagtgattctgttctaactgtgattaatcagaatgca
aagcagttggtaaacaaggagcatctctggagaatgtggagtatgatagtcagtccactg
actgatgtgattcaccagaccaatgaagtgaatcaaggcgatgccttagaacataatttt
agtgccatctatggtgcattgactttaccaataaaccatattttttcagctcagacattt
cccacgggtaccatgaaagctttacttaaaacttggtcagaattgtatagagcatttact
cgctgtgcttctttggtggcaacagcagaagagaatctgtgctgtgaagaactttcttct
aaaataatgtgcagtttggaagatgaagtcctttcagatttgctattcttggacaggatc
tctcatattattattgtaatggttgattgtatcgacttttcaccatataataagaaatac
cagccaaaaatcaaatcaccgcagagatcttcagattggtccagaaagaagaaggagcct
ctagggaaattggcttctttatttaagctaattgtgaaagtcatcgatactttccacact
ctaagcctcaaggaaacattctctgatacactgcttgctattggtaactctatcattagc
atgctttccaatgtatttggacatatttccttgccctctatgatccgagaaatatttgca
acttttacaagacctctggctttactgtatgaaaactcaaagctggatgaggctcctaaa
gtgtatactagtctgaacaacaagttagaaaagctattgggagaaattgttgcatgccta
cagttcagctatcttggagcctatgacagtgaacttcttgaacatctttctccactcctg
tgcgtaatatttcttcacaagaataaacagattcggaaacagagtgctctgttgtggaat
gccacatttgctaaagcgacagctctggtttatcctgaggaattaaaaccaatattaaga
caagccaaacagaaaattttgcttctgctgcctggtttggaaaatgttgaaatgatggat
gagtccagtgaaccgtattcagaatcaacagagaattcacaattaaatgtcaagataagt
ggcatggaaagaaaatcaagtggaaaaagagattccattttggcacatacaaaggataaa
aaaaaaaaagtgaaactgtcggccaaactgaaactagaatcttcatctccaaaaataaag
agtggtaagcttttggaagaggaaaagtctaccgactttgtcttcattcctccagaagga
aaagagacaaaggcaagggttctaactgagcatcagaaagaagtactcaaaacaaaacgg
tgtgatattcctgccttgtataataatctggatgcttcacaggacactttattttctgct
cagtttagtcaagaagaatcaatggaaagcctcactttaactgaaaaaccaaaagaagat
gccaagataattaaggaagagcaaatggaaagtactattttcatccatcaagatgccccg
gagaactgtggaatagatgaacattctgagaatgcttctttaccaaattgtggtggctct
gttgctgaaaccaatccagaaacattgatcactggttttgatgctagaaaagaagtatta
atttcatcaaagatattgtctgctgaaagttcatctagtacagaaacttcggtggtcagc
agtagttcagtttctaatgccactttttctggaactcctccacagcctacaagtcggaga
caaacctttattactttggagaaatttgatggctcagaaactagaccttttagtccatcc
cccttgaataacatatcttccactgttacagtgagaaataaccaggataacacaactaac
actgacatgccaccaaaagcaaggaaaagagaagtgacgaactcaaaatctgattcagaa
aatttagcgaatgcaggtaagaaatcaagtcggagatggagtaaagctgagcagtcagtt
actaaaaagtctaagccatcactgacatctgaacaggaagagcactcatccgaaaataac
tctcctgatctgctcagcccaacagaacatgtgtcagaaaatgatgatcatccttctgaa
gctaccctagagcataaagatggagatcctaaaccagcagtagaaaatgcttcattggaa
gacttaacaacagaagagaaaaatgtaggcattaatatggaatctaaagaaagtacagcc
tcagttgtagcacgaacagaacaaatagtaaatgaagatagtcaggctgctgcactagcc
ccaaatccaaaaacactccgacggtcttcgaggcggcgttcagaagctgtagattcttgc
agtgacagccaagagagagagagtggtcagcaaaaaaaggaaagacgaaaggaagaagaa
aaaataatctccaagagtccgttgcgtatcaaagatgataagttgcccacgcaaaaacta
actgatgagtcacctatacaggaaaatttaactgaaaagggaaatactttacctgagaga
acttcaggggaacccagtgttaatgctgaaattgaccaaaatagaagaaaaccagacctt
gagaatgttagttctgaaggaggtggtggtaccctggacaatctagacaagtcgtctgag
aaacctttaagaggacggacacgttatcaaacaagaagagcttcgcagggtttgatttct
gctgttgaaaactcagaatctgacagttctgaggcaaaggaagaagtttctagaaagaaa
cgatcagggaaatggaaaaatagaagcagtgacagtgttgacattgaagaacaagaagaa
aaaaaggctgaagaggaagttatgaaaactgcaaatcagacactcgatggccaggcagtt
cctgatgttgatgtaaatgcagcggctcaggtttgtgaaaaaagtacaaataacaacagg
gtcatcctccaggattctgctgggcctgcagattcactgcaagctccacccaaaggcgag
gagaaaagtaagattaacaaatgtgtagacagttcatttgtaagtctacctgtgccagag
tcaaacctcaggactaggaatgccagtaagagattattatataaacaagataatgatagt
aatgtgagggtatcagacagctctctgtctcccgaaaaattcacccaagttgaatgccaa
cacaagagaagtaggagagtcaggagatctaaaagttgtgactgctgtggcgaaaaatca
cagtcccaggaaaagtcatttattgggttaaagaacacagaaagttatgctataaagagt
gtggagaaaaaaaagacagatctacaagtacctgagactgcccctgaaactcgtgaagct
cgtgaccatgctgaaacaaagttggcaggcgaagagcctcttgtgaattttcatgtgggt
cttaaagaagagaattgtactactggtgattcagttaagtctgaggctgagttgcaagaa
gcttcccttccacctgaaatagtaactgtgaaagagaagacttacgatacagacgctagt
gaagcagtgtctgaaatccaagggccatgtagtgagaaccacagccctgctgaggaccca
ggcttaagtgagtgcaaagacatttcacagaagcagctttcagagaacggagagcttgac
atcagcgatgtagggaaggcatgcaaagtcatagctgggtccagtccagagggagttgaa
actatggaattaaatgtaagaaatgatgcatttgtagctgctgactctgaaaagagtacc
caaatggatgtttctgtagatgtggcaacagaggaagataataaaaaagatgaatgtgaa
gcagtcacaactgaagtgaatgttgaaggagtagccactgaggactttaattcaggtatg
gatctttctgatactcccatacctgtaagcaaggatgttgagactgagcacgcagctagt
ggggaaatagagggggagagcaatgaatctgattcaggctcatgtgaggaaatgaacaaa
gaaatgggaagtcacaaagcccagatgagcactgaaattgacagtgccagggtaaaggag
acggacatacttgccagtgcctctaaatctgaagaagcgctgattggaagactagacgtc
aacacccagagctttgttagtgacattgaaatgagttctggagaaagaactgttaattgc
aaaactgagacatccattgaacttaataaattagatgaagcaaaattaagtggcaatgaa
gctacagtgggaaatgatactctgcaggaagtttgctttacttcagagaaagtggagaaa
ttaccacagtgtctgctagttcaagtggcttctgaacttggagcagaaagcaatactacg
tctcccgaaaagttagagctggattcttttggatcagtaaatgaaagtcctagtggtatg
cagcaggcacgttgtgtctggtcacctttggcttctccatccacaagcattttaaagaga
ggactaaaaagatcccaagaagatgagatctcaccagttaacaagattagacgtgtctcg
tttgcagatccaatataccaagcaggattggcagatgacattgataggcgttgctctgtt
gttagatctcattcttcaaatagctctcccataataaaaagtgttaaaacttcacctact
tcacactctaagcataataccacttcagccaaaggatttctgtccccaggatcacagagc
tctaaatttaagagcccaaagaagtgtttaattacagaaatggcccaagaatccatgctg
tccccaacagaaagtgtttacccagctttggtgaactgtgcagcatcagttgacatcatt
ttacctcagattacatcaaatatgtgggcaagaggtcttgggcaactcatcagagccaag
aatataaaaaccattggggatttgagtacgcttacggcatctgaaataaaaactctgcct
atccgttctccaaaggtgtttaatgtaaaaaaggccctcagagtataccatgagcaacag
atgaaatctcgtggacttgaagaaattccaatttttgatatttctgagaaggcagtaaat
ggagtggagagcaggactgtctccacggatgaagaaaggttcgcctcagatttgattgaa
cctgtgaccctagataccccattgtctaaaaatcttgtggcacaaattagtgctcttgct
cttcaactggactcagaagatctctacagttacactggaagccagctatttgaaatgcat
gaaaaacttggtaccatggcaaactctataataagaaatctacagtcacgttggagatca
ccagcccatgaaaattcttag
DBGET
integrated database retrieval system
