Mus musculus (house mouse): 51869
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Entry
51869 CDS
T01002
Symbol
Rif1, 5730435J01Rik, 6530403D07Rik, D2Ertd145e
Name
(RefSeq) telomere-associated protein RIF1 isoform b
KO
K11138
telomere-associated protein RIF1
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
51869 (Rif1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmu03032
]
51869 (Rif1)
DNA replication proteins [BR:
mmu03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
51869 (Rif1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rif1_N
Motif
Other DBs
NCBI-GeneID:
51869
NCBI-ProteinID:
NP_001342344
MGI:
1098622
Ensembl:
ENSMUSG00000036202
UniProt:
Q6PR54
LinkDB
All DBs
Position
2:51962725..52016781
Genome browser
AA seq
2419 aa
AA seq
DB search
MTAPGRSPLEPLLETWEDPSVPPGEQTDAYLTLTSRMTGEEGKEVIAEIEKNLSRLYTVL
KAHISSQNSELSSAALQALGFCLYNPRITSGLSEANIQELLLTLNGIIKSSDKNVCTRAL
WVISKQTFPAELVSKMVSSIIDSLEVILSKGEIHSAVVDFEALNVIIRLIEQAPVQMGEE
SVRWAKLVIPLVVHSAQKVHLRGATALEMGMPLLLQKQQEIALITEHLMTTKLISELQKL
FKNKNETYVLKLWPLFVKLLGKTLHRSGSFINSLLQLEELGFRSGTPMIKKIAFIAWKSL
IDNFALNPDILCSAKRLKLLMQPLSSIHVRTETLALTKLEVWWYLLMRLGPQLPANFEQV
CVPLIQSTISVDSIPSPQGNSSRGSASPGLSPLTPGHKGASPYGSPRGNLSSNTGGMAAI
PSIQLLGLEMMLHFLLGPEVLSFAKQHKIVLSLEPLEHPLISSPSFFSKYAHTLITAVHD
SFVSVGKDASDAVVSAIWKELISLVKSVTEAGNRKEKSGSEVLTLLLKSLENIVKSEVFP
VSKTLVLMEITVKGLPPKVLGSPAYQVANMDILNGTPALFLIQLIFNNNLLECGVEDEKF
FLNLETLVGCVLSGPTSPLAFSDSVLTVINQNAKQLVNKEHLWRMWSMIVSPLTDVIHQT
NEVNQGDALEHNFSAIYGALTLPINHIFSAQTFPTGTMKALLKTWSELYRAFTRCASLVA
TAEENLCCEELSSKIMCSLEDEVLSDLLFLDRISHIIIVMVDCIDFSPYNKKYQPKIKSP
QRSSDWSRKKKEPLGKLASLFKLIVKVIDTFHTLSLKETFSDTLLAIGNSIISMLSNVFG
HISLPSMIREIFATFTRPLALLYENSKLDEAPKVYTSLNNKLEKLLGEIVACLQFSYLGA
YDSELLEHLSPLLCVIFLHKNKQIRKQSALLWNATFAKATALVYPEELKPILRQAKQKIL
LLLPGLENVEMMDESSEPYSESTENSQLNVKISGMERKSSGKRDSILAHTKDKKKKVKLS
AKLKLESSSPKIKSGKLLEEEKSTDFVFIPPEGKETKARVLTEHQKEVLKTKRCDIPALY
NNLDASQDTLFSAQFSQEESMESLTLTEKPKEDAKIIKEEQMESTIFIHQDAPENCGIDE
HSENASLPNCGGSVAETNPETLITGFDARKEVLISSKILSAESSSSTETSVVSSSSVSNA
TFSGTPPQPTSRRQTFITLEKFDGSETRPFSPSPLNNISSTVTVRNNQDNTTNTDMPPKA
RKREVTNSKSDSENLANAGKKSSRRWSKAEQSVTKKSKPSLTSEQEEHSSENNSPDLLSP
TEHVSENDDHPSEATLEHKDGDPKPAVENASLEDLTTEEKNVGINMESKESTASVVARTE
QIVNEDSQAAALAPNPKTLRRSSRRRSEAVDSCSDSQERESGQQKKERRKEEEKIISKSP
LRIKDDKLPTQKLTDESPIQENLTEKGNTLPERTSGEPSVNAEIDQNRRKPDLENVSSEG
GGGTLDNLDKSSEKPLRGRTRYQTRRASQGLISAVENSESDSSEAKEEVSRKKRSGKWKN
RSSDSVDIEEQEEKKAEEEVMKTANQTLDGQAVPDVDVNAAAQVCEKSTNNNRVILQDSA
GPADSLQAPPKGEEKSKINKCVDSSFVSLPVPESNLRTRNASKRLLYKQDNDSNVRVSDS
SLSPEKFTQVECQHKRSRRVRRSKSCDCCGEKSQSQEKSFIGLKNTESYAIKSVEKKKTD
LQVPETAPETREARDHAETKLAGEEPLVNFHVGLKEENCTTGDSVKSEAELQEASLPPEI
VTVKEKTYDTDASEAVSEIQGPCSENHSPAEDPGLSECKDISQKQLSENGELDISDVGKA
CKVIAGSSPEGVETMELNVRNDAFVAADSEKSTQMDVSVDVATEEDNKKDECEAVTTEVN
VEGVATEDFNSGMDLSDTPIPVSKDVETEHAASGEIEGESNESDSGSCEEMNKEMGSHKA
QMSTEIDSARVKETDILASASKSEEALIGRLDVNTQSFVSDIEMSSGERTVNCKTETSIE
LNKLDEAKLSGNEATVGNDTLQEVCFTSEKVEKLPQCLLVQVASELGAESNTTSPEKLEL
DSFGSVNESPSGMQQARCVWSPLASPSTSILKRGLKRSQEDEISPVNKIRRVSFADPIYQ
AGLADDIDRRCSVVRSHSSNSSPIIKSVKTSPTSHSKHNTTSAKGFLSPGSQSSKFKSPK
KCLITEMAQESMLSPTESVYPALVNCAASVDIILPQITSNMWARGLGQLIRAKNIKTIGD
LSTLTASEIKTLPIRSPKVFNVKKALRVYHEQQMKSRGLEEIPIFDISEKAVNGVESRTV
STDEERFASDLIEPVTLDTPLSKNLVAQISALALQLDSEDLYSYTGSQLFEMHEKLGTMA
NSIIRNLQSRWRSPAHENS
NT seq
7260 nt
NT seq
+upstream
nt +downstream
nt
atgacggccccaggtcgcagccccctggagccgcttctggagacttgggaagacccctcg
gtgcctccgggagagcagacggacgcctacctaactctgaccagtcgtatgactggagaa
gaaggaaaagaagtcattgcagaaatcgagaaaaacctttctcggctgtacacggtttta
aaggctcacatttccagtcagaactcagaactgagcagtgctgctttgcaagccttggga
ttttgtttatataatcccagaattacctcaggattgtcagaggcaaatattcaagaactg
cttttaaccttgaatggtatcattaagagttcagacaaaaatgtgtgtaccagggcactg
tgggtaatatccaaacagacgtttcctgctgaacttgttagcaaaatggtatccagtatt
attgattcattggaagtgatactaagtaaaggagagatacattctgctgttgttgatttt
gaagcattaaatgttattataaggctaattgaacaagccccagttcaaatgggagaagag
tctgtgaggtgggccaaattggtcataccattagttgttcactcagcacaaaaagtacat
ttgcggggagccactgctctagagatggggatgccattgctgcttcagaaacaacaagaa
atagccttgattacagagcaccttatgactactaaattaatctcagaactccaaaaacta
tttaagaataaaaatgagacttatgtgttaaaactatggcctttgtttgtcaaacttctt
ggaaagaccttgcaccgaagtgggagtttcatcaactctttgttacagctggaagaactg
ggcttccgtagtggaacacccatgattaaaaaaatcgctttcattgcttggaaaagctta
atagataattttgctttaaacccagatatactttgtagtgcaaaaagactgaagttgtta
atgcaacccttgagttccatccatgtgagaacagaaactttagcattaacaaaactagaa
gtctggtggtatttactgatgagacttggacctcagctccctgccaattttgaacaggtg
tgcgtgccactgattcagagtacaataagtgttgatagtattccttcacctcaaggcaat
tcatctcgagggtctgcttctccaggcttaagtccactgactccgggacataaaggtgct
tctccttatggaagtccccgtgggaacctgagttcaaatacaggtggaatggctgcaatc
ccttctattcagcttttgggactggaaatgatgcttcattttttgttgggcccagaagtt
ttgagttttgccaagcaacacaagattgtattgagtttagagccactggaacacccgcta
atcagcagcccttctttcttctccaagtatgcgcatacacttatcactgctgttcatgat
agctttgtctcagttggaaaggatgcctcagatgcagtagtcagtgctatctggaaggag
ctaattagcttggtgaagtcagttactgaagcaggaaacagaaaagaaaaatcaggttct
gaagttttgacccttctactaaaatctttggaaaacatagtgaagtcagaagtatttcct
gtatcaaaaacactggttctcatggaaattacagttaaaggacttcctccgaaagtacta
ggttcaccagcatatcaggttgctaatatggatattcttaatggaactccagcattgttt
ttaatccagttaattttcaacaacaatcttttagaatgtggtgtagaagatgagaagttt
tttctcaatctagaaacacttgtaggctgtgtactttctggtccaacatcaccactggct
tttagtgattctgttctaactgtgattaatcagaatgcaaagcagttggtaaacaaggag
catctctggagaatgtggagtatgatagtcagtccactgactgatgtgattcaccagacc
aatgaagtgaatcaaggcgatgccttagaacataattttagtgccatctatggtgcattg
actttaccaataaaccatattttttcagctcagacatttcccacgggtaccatgaaagct
ttacttaaaacttggtcagaattgtatagagcatttactcgctgtgcttctttggtggca
acagcagaagagaatctgtgctgtgaagaactttcttctaaaataatgtgcagtttggaa
gatgaagtcctttcagatttgctattcttggacaggatctctcatattattattgtaatg
gttgattgtatcgacttttcaccatataataagaaataccagccaaaaatcaaatcaccg
cagagatcttcagattggtccagaaagaagaaggagcctctagggaaattggcttcttta
tttaagctaattgtgaaagtcatcgatactttccacactctaagcctcaaggaaacattc
tctgatacactgcttgctattggtaactctatcattagcatgctttccaatgtatttgga
catatttccttgccctctatgatccgagaaatatttgcaacttttacaagacctctggct
ttactgtatgaaaactcaaagctggatgaggctcctaaagtgtatactagtctgaacaac
aagttagaaaagctattgggagaaattgttgcatgcctacagttcagctatcttggagcc
tatgacagtgaacttcttgaacatctttctccactcctgtgcgtaatatttcttcacaag
aataaacagattcggaaacagagtgctctgttgtggaatgccacatttgctaaagcgaca
gctctggtttatcctgaggaattaaaaccaatattaagacaagccaaacagaaaattttg
cttctgctgcctggtttggaaaatgttgaaatgatggatgagtccagtgaaccgtattca
gaatcaacagagaattcacaattaaatgtcaagataagtggcatggaaagaaaatcaagt
ggaaaaagagattccattttggcacatacaaaggataaaaaaaaaaaagtgaaactgtcg
gccaaactgaaactagaatcttcatctccaaaaataaagagtggtaagcttttggaagag
gaaaagtctaccgactttgtcttcattcctccagaaggaaaagagacaaaggcaagggtt
ctaactgagcatcagaaagaagtactcaaaacaaaacggtgtgatattcctgccttgtat
aataatctggatgcttcacaggacactttattttctgctcagtttagtcaagaagaatca
atggaaagcctcactttaactgaaaaaccaaaagaagatgccaagataattaaggaagag
caaatggaaagtactattttcatccatcaagatgccccggagaactgtggaatagatgaa
cattctgagaatgcttctttaccaaattgtggtggctctgttgctgaaaccaatccagaa
acattgatcactggttttgatgctagaaaagaagtattaatttcatcaaagatattgtct
gctgaaagttcatctagtacagaaacttcggtggtcagcagtagttcagtttctaatgcc
actttttctggaactcctccacagcctacaagtcggagacaaacctttattactttggag
aaatttgatggctcagaaactagaccttttagtccatcccccttgaataacatatcttcc
actgttacagtgagaaataaccaggataacacaactaacactgacatgccaccaaaagca
aggaaaagagaagtgacgaactcaaaatctgattcagaaaatttagcgaatgcaggtaag
aaatcaagtcggagatggagtaaagctgagcagtcagttactaaaaagtctaagccatca
ctgacatctgaacaggaagagcactcatccgaaaataactctcctgatctgctcagccca
acagaacatgtgtcagaaaatgatgatcatccttctgaagctaccctagagcataaagat
ggagatcctaaaccagcagtagaaaatgcttcattggaagacttaacaacagaagagaaa
aatgtaggcattaatatggaatctaaagaaagtacagcctcagttgtagcacgaacagaa
caaatagtaaatgaagatagtcaggctgctgcactagccccaaatccaaaaacactccga
cggtcttcgaggcggcgttcagaagctgtagattcttgcagtgacagccaagagagagag
agtggtcagcaaaaaaaggaaagacgaaaggaagaagaaaaaataatctccaagagtccg
ttgcgtatcaaagatgataagttgcccacgcaaaaactaactgatgagtcacctatacag
gaaaatttaactgaaaagggaaatactttacctgagagaacttcaggggaacccagtgtt
aatgctgaaattgaccaaaatagaagaaaaccagaccttgagaatgttagttctgaagga
ggtggtggtaccctggacaatctagacaagtcgtctgagaaacctttaagaggacggaca
cgttatcaaacaagaagagcttcgcagggtttgatttctgctgttgaaaactcagaatct
gacagttctgaggcaaaggaagaagtttctagaaagaaacgatcagggaaatggaaaaat
agaagcagtgacagtgttgacattgaagaacaagaagaaaaaaaggctgaagaggaagtt
atgaaaactgcaaatcagacactcgatggccaggcagttcctgatgttgatgtaaatgca
gcggctcaggtttgtgaaaaaagtacaaataacaacagggtcatcctccaggattctgct
gggcctgcagattcactgcaagctccacccaaaggcgaggagaaaagtaagattaacaaa
tgtgtagacagttcatttgtaagtctacctgtgccagagtcaaacctcaggactaggaat
gccagtaagagattattatataaacaagataatgatagtaatgtgagggtatcagacagc
tctctgtctcccgaaaaattcacccaagttgaatgccaacacaagagaagtaggagagtc
aggagatctaaaagttgtgactgctgtggcgaaaaatcacagtcccaggaaaagtcattt
attgggttaaagaacacagaaagttatgctataaagagtgtggagaaaaaaaagacagat
ctacaagtacctgagactgcccctgaaactcgtgaagctcgtgaccatgctgaaacaaag
ttggcaggcgaagagcctcttgtgaattttcatgtgggtcttaaagaagagaattgtact
actggtgattcagttaagtctgaggctgagttgcaagaagcttcccttccacctgaaata
gtaactgtgaaagagaagacttacgatacagacgctagtgaagcagtgtctgaaatccaa
gggccatgtagtgagaaccacagccctgctgaggacccaggcttaagtgagtgcaaagac
atttcacagaagcagctttcagagaacggagagcttgacatcagcgatgtagggaaggca
tgcaaagtcatagctgggtccagtccagagggagttgaaactatggaattaaatgtaaga
aatgatgcatttgtagctgctgactctgaaaagagtacccaaatggatgtttctgtagat
gtggcaacagaggaagataataaaaaagatgaatgtgaagcagtcacaactgaagtgaat
gttgaaggagtagccactgaggactttaattcaggtatggatctttctgatactcccata
cctgtaagcaaggatgttgagactgagcacgcagctagtggggaaatagagggggagagc
aatgaatctgattcaggctcatgtgaggaaatgaacaaagaaatgggaagtcacaaagcc
cagatgagcactgaaattgacagtgccagggtaaaggagacggacatacttgccagtgcc
tctaaatctgaagaagcgctgattggaagactagacgtcaacacccagagctttgttagt
gacattgaaatgagttctggagaaagaactgttaattgcaaaactgagacatccattgaa
cttaataaattagatgaagcaaaattaagtggcaatgaagctacagtgggaaatgatact
ctgcaggaagtttgctttacttcagagaaagtggagaaattaccacagtgtctgctagtt
caagtggcttctgaacttggagcagaaagcaatactacgtctcccgaaaagttagagctg
gattcttttggatcagtaaatgaaagtcctagtggtatgcagcaggcacgttgtgtctgg
tcacctttggcttctccatccacaagcattttaaagagaggactaaaaagatcccaagaa
gatgagatctcaccagttaacaagattagacgtgtctcgtttgcagatccaatataccaa
gcaggattggcagatgacattgataggcgttgctctgttgttagatctcattcttcaaat
agctctcccataataaaaagtgttaaaacttcacctacttcacactctaagcataatacc
acttcagccaaaggatttctgtccccaggatcacagagctctaaatttaagagcccaaag
aagtgtttaattacagaaatggcccaagaatccatgctgtccccaacagaaagtgtttac
ccagctttggtgaactgtgcagcatcagttgacatcattttacctcagattacatcaaat
atgtgggcaagaggtcttgggcaactcatcagagccaagaatataaaaaccattggggat
ttgagtacgcttacggcatctgaaataaaaactctgcctatccgttctccaaaggtgttt
aatgtaaaaaaggccctcagagtataccatgagcaacagatgaaatctcgtggacttgaa
gaaattccaatttttgatatttctgagaaggcagtaaatggagtggagagcaggactgtc
tccacggatgaagaaaggttcgcctcagatttgattgaacctgtgaccctagatacccca
ttgtctaaaaatcttgtggcacaaattagtgctcttgctcttcaactggactcagaagat
ctctacagttacactggaagccagctatttgaaatgcatgaaaaacttggtaccatggca
aactctataataagaaatctacagtcacgttggagatcaccagcccatgaaaattcttag
DBGET
integrated database retrieval system
