Mus musculus (house mouse): 52335
Help
Entry
52335 CDS
T01002
Symbol
Atxn1l, Boat, C330011L24Rik, D6Mgi37, D8Ertd587e
Name
(RefSeq) ataxin 1-like
KO
K23616
ataxin 1/1L
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu04330
Notch signaling pathway
mmu05017
Spinocerebellar ataxia
mmu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
52335 (Atxn1l)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
52335 (Atxn1l)
05022 Pathways of neurodegeneration - multiple diseases
52335 (Atxn1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AXH
ATXN-1_C
Motif
Other DBs
NCBI-GeneID:
52335
NCBI-ProteinID:
NP_001074399
MGI:
3694797
Ensembl:
ENSMUSG00000069895
UniProt:
P0C7T6
LinkDB
All DBs
Position
8:complement(110453083..110464426)
Genome browser
AA seq
687 aa
AA seq
DB search
MKPVHERSQECLPPKKRDLPVTSEDMGRTTSCSTNHTPSSDASEWSRGVVVAGQSQTGAR
VSLGGDGTEAITGLTVDQYGMLYKVAVPPATFSPTGLPSVVNMSPLPPTFNVASSLIQHP
GIHYPPVHYAQLPSTSLQFIGSPYSLPYAVPPNFLPSPLLSPSANLATTHLPHFVPYASL
LAEEATPPPQAASPAQSFNKSSSATSPPGQLPHHSNTQPLDLAPGRMPIYYQMSRLPAGY
TLHETSTAGASPILTPQEGQSALEAAAANGQRQRERNVRRESEALDSASSKGESQGLVPV
VECMADGQLFSGSQTPRVEVAAPAHRGTPDTDLEVQRVVGALASQDYRVVAAQRKDEPSP
LNLSHHNLDHQGEGRGSARNPTELVEKSQARVFYPQSHQEPVKHRPLPKAMVVANGNLVP
TGTDPSLLPVGSEILVASSLDLQARATFPDKEPTPPPVTSSHLPSHFMKGAIIQLATGEL
KRVEDLQTQDFVRSAEVSGGLKIDSSTVVDIQESQWPGFVMLHFVVGEQQSKVSIEVPPE
HPFFVYGQGWSSCSPGRTAQLFSLPCHRLQVGDVCISISLQSLNSNSVSQASCAPPGQLG
TPRERPERTVLGPRDLCDSEGKNQPSGEGSRVGEPSQPEPGAQACWPAPSFQRFSMQGEE
ARAAMLRPSFIPQEVKLSIEGRSNAGK
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctgttcatgagcggagtcaggaatgccttccaccaaagaaacgagacctccct
gtgaccagcgaggatatggggagaactaccagctgctccacaaaccacacaccctccagt
gacgcttctgaatggtcccgaggggttgtggtggctgggcagagccagacgggagccaga
gtcagcctcgggggtgatggaactgaggccatcactggcctgacagtagatcagtatggc
atgctgtacaaggtggctgtgccacctgccaccttctcaccaactggcctgccatctgtt
gtgaacatgagccccttaccccccacatttaatgtagcgtcttcactgattcaacatccg
ggaatccactatcccccagtccactatgctcagctcccatccacctcactgcagtttatt
gggtctccatacagccttccttatgctgtgccacctaatttcctacccagtcctctcctc
tctccttctgccaaccttgccaccactcaccttccacactttgtgccatatgcctctctc
ctcgcagaagaagctactccccctccacaggccgcatccccagctcagtcatttaacaag
tcctcatctgccacctccccgcccggccagttgccacatcactcgaatactcaaccactg
gatcttgctccaggccggatgcccatttattatcaaatgtctaggctacctgctggatat
accttgcatgaaacttcaacagcaggtgccagccccattcttactcctcaggagggccag
tctgctctggaagcagctgctgccaatggacagagacaacgagagcgaaatgtaagacgc
gaaagtgaagcccttgactccgccagcagcaagggtgaaagccaaggactggtgccggtg
gtggaatgcatggcggatggacagttgttttcaggttctcagactccgagagtggaggtg
gcggcgccagcacatcgagggaccccagacaccgacctagaggtccagcgggtagttggc
gctttagcttctcaggactatcgtgtggtggcagctcagaggaaagatgagcccagccct
cttaacctatcccatcataaccttgaccatcagggtgagggacgagggtctgccaggaat
cctacagaactggtggagaaaagtcaggcccgtgtgttctacccgcagtcccatcaggaa
ccagtaaaacacagacctttacccaaagcaatggttgtagccaatggcaacctggtgccc
actggaactgaccctagcctgctgcctgtgggctcagagatcctggtggcatcaagtctg
gacctgcaggccagagccaccttcccagacaaggagccaacgccacctcccgttacctct
tcccacctgccctcccatttcatgaaaggcgccatcattcagctggctacaggggagctg
aagcgggtagaggacctccagacccaggattttgtgcgaagtgcggaagtgagtgggggg
ctgaaaattgactctagcacagtcgtggacattcaggagagccagtggcctggatttgtt
atgctgcatttcgtggttggtgaacagcagagcaaagtgagcattgaggtgccccctgag
caccctttttttgtatatggccagggttggtcctcctgcagccctgggcggactgcacaa
ctcttctctctgccctgccatcggctacaggtgggagatgtctgcatctctatcagttta
cagagcttgaacagtaactcagtatctcaggccagctgtgctcccccagggcagctgggt
acaccccgagaaaggcctgagaggacagtcttggggcccagagacctatgtgacagcgag
gggaagaaccagccttcaggagagggttcccgggtgggagaaccctcccagcctgagcct
ggtgctcaggcctgctggccagccccaagcttccaaagattcagcatgcaaggggaggag
gcacgggctgcgatgctccgtccctctttcattccacaggaggtaaagctgtccatcgaa
gggcgttccaatgcaggaaaatga
DBGET
integrated database retrieval system
