Mus musculus (house mouse): 52513
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Entry
52513 CDS
T01002
Symbol
Ddx56, 2600001H07Rik, D11Ertd619e, Noh61
Name
(RefSeq) DEAD box helicase 56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
mmu
Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mmu03009
]
52513 (Ddx56)
Enzymes [BR:
mmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
52513 (Ddx56)
Ribosome biogenesis [BR:
mmu03009
]
Eukaryotic type
Pre-60S particles
Helicases
52513 (Ddx56)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
52513
NCBI-ProteinID:
NP_080814
MGI:
1277172
Ensembl:
ENSMUSG00000004393
UniProt:
Q9D0R4
Q5SVX3
LinkDB
All DBs
Position
11:complement(6205343..6218389)
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AA seq
546 aa
AA seq
DB search
MEDQEALGFEHMGLDPRLLQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAA
YAIPMLQSLLHKKATGPVMEQAVRGLVLVPTKELARQAQAMIQQLAAYCARDVRVANVSA
AEDSASQRAVLMEKPDVVVGTPSRVLSHLQQNTLKLRDSLELLVVDEADLLFSFGFEDEL
KSLLCHLPRIYQAFLMSATFNEDVQTLKELVLHNPVTLKLQESQLPGPDQLQQFQVVCET
EEDKFLLLYALLKLSLIRGKALLFVNTLERGYRLRLFLEQFSIPSCVLNGELPLRSRCHI
ISQFNQGLYDCVIATDAEILGPQVKGKRRGRGSKGNKASDPESGVARGIDFHHVSAVLNF
DLPPTAEAYVHRAGRTARANNPGIVLTFVLPAEQPFLGKIEDLLSGEGEAPILLPYQFQM
EEIESFRYRCRDAMRSVTKQAIREARLKEIKEELLHSEKLKTYFEDNPRDLQLLRHDLPL
HPAVVKPHLGHVPDYLVPAALRGLVHPRKKRRKVPFSRKAKKVKAQNPLRDFKHRGKKPK
PAAKPS
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccaagaagcgctgggttttgaacacatgggcctggatccccggctcctgcag
gctgtcaccgatttgggctggtcgcgacctacgttgatccaggaaaaggccattcctctg
gcgctggaggggaaggacctcctggcccgcgcccgcacaggctccgggaagaccgcagct
tatgctattccgatgcttcagtcgcttctccacaagaaggcgacaggtcctgtaatggag
caggctgtgagaggccttgttcttgttcctaccaaggagctggcacggcaggcccaggcc
atgatccagcaactggctgcctactgtgctcgggatgtgcgagtggctaacgtctcagct
gcagaagactcagcttctcagagagctgtgttgatggagaagccagatgtggtggtggga
accccatcccgagtgttaagccacttgcagcagaacaccttgaaactccgggactcccta
gagctgctggtggtagatgaagctgaccttcttttttcctttggctttgaggatgaactc
aagagtcttctctgtcacttgcctcggatttaccaggcttttctcatgtcggccactttc
aatgaggatgtacaaactctgaaggagctggtactgcataacccggttaccctcaagtta
caggagtcccagctgccggggccagaccagctccagcaatttcaggtggtctgtgagaca
gaagaggacaagttcttgctgctgtatgccctgctcaagctgtcactgattcggggcaaa
gccttgctctttgtcaacactctagagaggggttaccggctccgtcttttcctggaacag
ttcagcattccttcctgcgtgctcaacggagaactcccactgcgctccaggtgccacatc
atctcacagttcaaccaaggcttgtatgattgcgtcatagcgacagatgctgaaatcttg
ggaccccaagtcaaaggcaaacgtcgaggccgcgggtccaaaggaaacaaggcctctgat
ccagagtcaggtgtggctcggggcatagacttccaccacgtgtctgcggtcctcaatttt
gaccttcctcccaccgcagaggcttatgtccatcgagctggcaggacagctcgagccaac
aacccaggcatagttctgacctttgtgttgcccgcggaacagcctttcttgggaaagatt
gaggaccttctgagtggagagggcgaggcccccatcctgcttccataccagttccagatg
gaggagattgaaagctttcgttatcgctgcagggatgccatgcgctcagtgaccaagcag
gccattcgagaggcgagactgaaggagatcaaggaggagcttctgcactcagagaagctc
aagacatactttgaagacaaccccagagaccttcagctacttcgccatgatctgcccttg
cacccggcagtggtgaagcctcatttgggccatgtccctgactatttggttcctgctgct
cttcgtggccttgtacatcctcgaaagaaacggagaaaggtgcccttctctaggaaggct
aagaaggtgaaggcccagaacccactgcgtgactttaagcacaggggaaagaaacctaag
cccgcagcaaagccttcttga
DBGET
integrated database retrieval system
