Mus musculus (house mouse): 52864
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Entry
52864 CDS
T01002
Symbol
Slx4, Btbd12, D16Bwg1016e
Name
(RefSeq) SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae)
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
52864 (Slx4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmu04121
]
52864 (Slx4)
03400 DNA repair and recombination proteins [BR:
mmu03400
]
52864 (Slx4)
Ubiquitin system [BR:
mmu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
52864 (Slx4)
DNA repair and recombination proteins [BR:
mmu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
52864 (Slx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slx4
BTB
Motif
Other DBs
NCBI-GeneID:
52864
NCBI-ProteinID:
NP_803423
MGI:
106299
Ensembl:
ENSMUSG00000039738
UniProt:
Q6P1D7
LinkDB
All DBs
Position
16:complement(3796969..3821708)
Genome browser
AA seq
1565 aa
AA seq
DB search
MVPESAPNGNSQPLPSCFTTTGVPSPSKPRVSELVLQRMKQFKRADPERLRHASEESPQK
TALGDDVPRSPPEETVGENEYKLDATDSDAAMALALQQEFRREEASSHHDSLEEKGLFFC
QMCQKNLSAMNVTRREQHVNRCLDEAEKAQRPASPRIPDCPICGKPFLTTKSRISHLKQC
AVRMEVGPQLLLQAVRLQTAQPEVDGSPQVPSFSNNVGGLKRKGVTTKREPRRRKVNKPE
APSEDLLVAMALSRSEVEHCPVVPPLRLENAFSEKIRLGAEKKSRKKRPPVCPPQLVTQD
SETTGRQIEDRVAQLLSEEAELSCTPPLLASKISKEELEPAGWRARLPEGKRNFLWELSA
LTGAWAEESFYTVGLFPPIVSQCPSKEPQLPLELPKQGEPSPRRPPASQSSLPVSHSPKI
RLLSSSQRERQALQDLVDLAVEGLSSSPQPGSRGVPTGLDLVPSSLPLTGFVLPCKKTLK
KDDSASLSLGLLVTDFGAMVNNPHLSDVQFQLDSGEVLYAHKFVLYARCPLLIQYVSTES
FSSEEDGDLTQRALLSDVSSEAAHAFLNYLYMADTDMPPSLVPDLRSLALRFGVSDLVQL
CEQVPAVVDLEGEQPEETSEDCESRAETFLELLRSVWVDNEEEVETLLKPELCEEERERV
NEAEMEEIYEFAATQRKLLQWGRAADPDGSTNPHGEDGAVSEPSLAGVQSNRQLENTEHM
ESSGLEKEEALASWEQEGHSTPLQDQCPDWAGKAEAQDALGEATDDPSFCSRHRRGKECL
PLHPNKAHGCKQPLPSNPRVSSELSQITVDHEEQSDHVRETQADMAQAPTPHSCSLVSQS
SVDGSPSQSWLHLYHTSHLSPSVSQSHSSISRVASPRSLSPTTPTKQRRGSNIVTLRKDA
GHHRGQQSSPIAGHRNRGILISPAKSPPIDLTQSVPEPLSPRAQDPLHFVKKEDEVILLL
DSDEELEHTKTESVSKDSPEGRKVPEFSPRSSELFSVIDVEEDHEHFQSPLKREAGLQHG
EEGQLGNQSALGCRDIPWLLCSQKTSLDEDSATDTSWLVPATPGVSRSRDCSSQTQIKSL
KTRIPSDETAQQTPRPNLERRTMLETAQQFSVIMPHTQPITLGAFDSGRQAYRSPSHPYP
RHHRLSSSQPSCPGPDFTRWSQKSSAPRPCLPNLPAADDVVEVGDSDDEVASHQGNSSPV
LDGDPPGPMGDYCWNEPLSPIPIDHLNLERTGPLTTSSPSSQVLEALHSDDCHSPGLGTT
PIRGSCGTLRESQERSSLAGSPEALWDDWNEEEGQSPEAPPVAQMLSTRTRKPDRPETPK
GANQKKNLPPKVPITPMPRYSIMETPVLKKELDRFGVRALPKRQMVLKLKEIFQYTHQTL
ESDSEDEVQSPQIPAELPCRQASTTETCNPSRLPTGEPSHPDGDAQLPASQESMATSVDG
SDNSFSSKSSSAEFGAAFEYSDEDKDEEVGVTASQAAIQAADTEEAVRRYIRSKPALHRQ
VLRYQPVELAELQAELKQNGIPVAMGKLSDILDAQCITFTTAAARKEKLKHKRRQPSGRK
KKDQK
NT seq
4698 nt
NT seq
+upstream
nt +downstream
nt
atggttccagagagtgctcccaatggcaactcccagcctcttccttcctgtttcacgaca
actggtgtaccaagtccctccaaacccagagtctcagagctggttctgcaacggatgaag
cagttcaagagagcagaccctgagcgcctgagacacgcctcagaagaatccccccaaaag
actgcactgggagacgatgtcccaaggagccctccagaggagacagtgggagaaaatgag
tataaacttgatgccacagacagtgatgctgcaatggccctggccttacagcaggagttt
agaagggaggaagcatcctcacaccatgacagcctggaggagaaggggttgttcttctgt
caaatgtgtcagaaaaacctctcagcaatgaatgtaacccggagggagcaacatgtgaac
agatgcctagatgaggcagagaaggcacagagacctgcttcacctcggatccctgattgc
ccaatatgtgggaaaccgttcctcaccaccaagagccgaatcagtcacttgaagcagtgt
gcggtgaggatggaagtgggtccccaactcctgcttcaggctgtgaggctacagacagct
cagccagaggtggatggcagccctcaggtacccagtttcagcaacaacgttggaggtttg
aaacggaaaggagtcaccaccaaaagggagccaaggaggaggaaagtcaataagcctgag
gctccgtctgaagatctgttggtggccatggctctgtctcgctctgaggtggagcactgt
ccagttgtgcccccgctcagactggaaaatgctttttctgagaagataaggctaggagca
gagaagaaaagtcgcaagaagagacccccggtgtgtcccccacagttggtaacccaagac
tctgagaccacaggtagacagattgaagatcgtgttgcccagcttctgtcagaggaagca
gaactatcttgcaccccaccacttcttgccagcaagatttctaaggaagaattggaacct
gcaggctggcgagcacggctgcctgaagggaagcggaactttctgtgggaactcagcgct
ctcacaggagcctgggctgaggagtccttctacacagtgggactgtttcctccaattgtg
tcccaatgcccttccaaggaaccccagctaccattggagctgcccaagcaaggagagccg
agtccacggcggccacctgcttcccagagcagccttcctgtgagccacagccccaagatc
cggctgctgtcctccagccagagggagcgtcaagcccttcaggaccttgtggacttggca
gtggaagggctgagctctagcccacagcccgggagtcggggcgtacccacagggttggac
ctggtacctagcagccttccgctgacggggtttgtccttccatgtaagaagaccctgaag
aaggatgacagtgcctcactctctcttgggttattggtgacagactttggggccatggtc
aataatccacacctgagtgatgtccagttccagcttgacagtggagaggtgctttatgca
cacaagtttgttctttatgcgagatgcccacttcttattcagtatgtaagcactgaaagc
ttttcttctgaagaggacggggatctgacccagcgtgctctgctgagtgatgtgagctcg
gaggccgcccatgcatttctgaactacctctacatggcagacactgacatgcctcccagc
ctggttccggatctgcgttccctggccctaaggtttggtgtgagtgaccttgttcagctg
tgtgaacaagtgcccgccgtggtggacttagagggagaacagccagaagagaccagtgag
gactgtgaaagccgagcagagactttcctggaactcctgaggtcggtgtgggtagacaat
gaggaggaagtggagactctgctgaaacctgagctctgtgaagaagagagagaaagagtg
aatgaagcagaaatggaagagatatatgaatttgctgctacgcagaggaagcttctccag
tgggggagagcagcagacccagatgggagcactaacccgcatggggaagacggtgcagtt
tctgagccttccctggcaggtgtccagagtaacagacagctagaaaatacagagcacatg
gagtcatctgggttagaaaaagaagaggcactagccagctgggaacaagaaggacattcc
actccactgcaggaccagtgcccagactgggcagggaaagcagaggcccaggatgcattg
ggggaggcaactgacgaccccagcttctgcagccgccacaggagggggaaagagtgcttg
cctttgcacccaaacaaggcccatggctgcaaacagccccttccatcaaatccaagagtg
tcatctgaactgtcacaaataacagttgatcatgaagagcagagtgaccatgtcagggag
acgcaggcagacatggcccaggcacctactccacactcctgcagccttgtgtcacagtct
tctgtggatggaagtcccagccagtcatggcttcacctataccacacaagtcatttgtcc
ccctcagtgtcccagtcacacagtagcatttccagggtggcatccccaagatcactgtct
ccaactacaccaactaagcagaggaggggcagtaacattgtcacattacggaaagatgct
ggccaccacagaggccaacaaagtagccccatagcgggacacagaaataggggcatcctg
atttccccagcaaagtctccacccattgacctcacacagtcagtacccgagcccctgagc
cccagggcccaggatcctctgcatttcgtgaaaaaggaggatgaggtcatcctgttactg
gactcagatgaggagctggagcacaccaagacagagtcagtttctaaagattccccagaa
ggaaggaaagttccagaatttagccccaggtcctctgaactgttttcagtcattgatgtt
gaagaagatcatgaacatttccaaagcccactgaagagagaggccgggctacagcacggg
gaggaaggacagctgggaaaccagtctgcgctgggctgcagagacatcccctggctgctc
tgcagccagaaaaccagcctggatgaggacagtgctacagacacctcttggctggtgcct
gccactccaggggtcagcaggagtcgtgattgctcatcacagacccaaatcaaaagcctt
aagaccaggattccgtcagatgagactgctcagcaaacacctagacctaacttagaacgc
aggaccatgctggaaacagcccagcagttctctgtgatcatgccacacacacagcctatt
actctaggagcctttgacagcggaagacaggcctacagaagcccttcccatccctacccc
aggcaccacagactctcttcttcacagccatcatgtcctggccctgattttaccaggtgg
tcccagaaatcttccgcacctagaccatgcctgccaaatctgcctgcagctgatgatgtg
gtagaagttggggacagtgatgatgaggtggcttcccatcaaggaaacagcagccccgtg
ctagatggtgaccccccaggtcccatgggtgactactgttggaatgagcctctctcacca
attccaattgaccacttgaatctggagcggaccggccccctgaccacaagcagtcccagc
agtcaggtcctggaggctttgcacagtgatgactgccactccccgggacttggtaccacc
cccatccgaggaagctgtggtacgctgagagagtctcaggaacggtcctcactggctggc
tctccagaggctctgtgggacgactggaatgaggaggaaggacagtctccagaggcccca
cctgtggctcaaatgctgagtaccagaactcggaagccagacaggccagagacaccaaaa
ggtgctaaccagaaaaagaacttgcctcccaaagtgcctataactccaatgccaaggtat
tcgatcatggagaccccggtgctgaagaaagaactggacaggtttggagtccgtgctctg
cccaaacgccagatggttctaaaactgaaggagattttccagtacactcaccagactctg
gagtcggactctgaggatgaggtccagtccccccagatacccgcagaactaccttgtcgc
caggcatctaccactgagacctgcaacccttcaaggttgccaactggggagccttcacat
cctgatggtgacgcccagctcccagcctcccaggaatccatggctacctctgtggacggc
agtgacaactcctttagctctaaaagctcctctgctgagtttggagctgcgtttgagtat
tcagatgaagacaaggatgaggaggtcggggtcactgcatcacaggccgcaatccaggcc
gcagacacagaggaggcagtgaggcgctatatccgctctaagcctgccctgcacaggcag
gtcctgaggtaccagcctgtggagctggccgagctgcaggctgagctgaaacagaatggc
atccctgtggccatgggcaagctgtcggacatcctggacgctcagtgcatcaccttcacc
actgctgcagcccgaaaggagaaactcaaacacaagagacggcagccctcaggccgaaag
aaaaaggatcagaaatga
DBGET
integrated database retrieval system
