Mus musculus (house mouse): 53417
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Entry
53417 CDS
T01002
Symbol
Hif3a, Ipas, MOP7, NEPAS, bHLHe17
Name
(RefSeq) hypoxia inducible factor 3, alpha subunit
KO
K09096
hypoxia-inducible factor 3 alpha
Organism
mmu
Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmu03000
]
53417 (Hif3a)
Transcription factors [BR:
mmu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
53417 (Hif3a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
PAS
HIF-1
PAS_4
PAS_9
HLH
PAS_2
Motif
Other DBs
NCBI-GeneID:
53417
NCBI-ProteinID:
NP_058564
MGI:
1859778
Ensembl:
ENSMUSG00000004328
UniProt:
Q0VBL6
Structure
PDB
PDBj
LinkDB
All DBs
Position
7:complement(16764918..16796352)
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AA seq
662 aa
AA seq
DB search
MDWDQDRSNTELRKEKSRDAARSRRSQETEVLYQLAHTLPFARGVSAHLDKASIMRLTIS
YLRMHRLCAAGEWNQVEKGGEPLDACYLKALEGFVMVLTAEGDMAYLSENVSKHLGLSQL
ELIGHSIFDFIHPCDQEELQDALTPRPNLSKKKLEAPTERHFSLRMKSTLTSRGRTLNLK
AATWKVLHCSGHMRAYKPPAQTSPAGSPRSEPPLQCLVLICEAIPHPASLEPPLGRGAFL
SRHSLDMKFTYCDERIAEVAGYSPDDLIGCSAYEYIHALDSDAVSRSIHTLLSKGQAVTG
QYRFLARTGGYLWTQTQATVVSGGRGPQSESIICVHFLISRVEETGVVLSLEQTEQHTRR
PPRLSASSQKGIPGNSVDSPAPRILAFLHPPALSEASLAADPRRFCSPDLRRLMAPILDG
PPPAATPSTPQATRRPQSPLPADLPDKLTVGLENAHRLSTAQKNKTVETDLDIAQDPDTL
DLEMLAPYISMDDDFQLNSSEQLPKVHRRPPRVARRPRARSFHGLSPPIPEPSLLPRWGS
DPRLNCSSPSRGDRPTASLMPGTRKRALAQSSEDKGLELLETKPPKRSPRLEPGSFLLPP
LSLSFLLQGRQLPGNQQDPRAPLVHSHEPLGLAPSLLSLCQHEETVQPRNRFPPAAGLGQ
TH
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggactgggaccaagacaggtcgaacaccgagctgcggaaggagaagtcgcgggacgcg
gcccgcagccggcgcagccaggagacggaggtgctgtaccagctggcgcacactctgccc
tttgcgcgcggcgtcagcgcgcacctggacaaggcctccatcatgcgcctcacaatcagc
tacctgcgcatgcaccgcctctgcgcagcaggggagtggaaccaggtggaaaaaggggga
gagccactggacgcctgctacctgaaggccctggagggtttcgtcatggtactcaccgcc
gagggagacatggcttacctgtcggaaaatgtcagcaagcacctgggcctcagtcagctg
gagctcattggacacagtatctttgattttatccatccctgtgaccaagaggaacttcaa
gacgccctgacccccaggccgaacctgtcaaagaagaagctggaagccccaacagagcgc
cacttttccctgcgaatgaagagcacgctcaccagcagagggcgcacgctcaacctcaaa
gcggccacctggaaggtgctgcactgctcaggacatatgagggcctacaagccccctgca
cagacttcccctgccgggagccctcgctccgagcctcccctgcaatgcctggtgcttatc
tgtgaagccatcccccacccagccagtctggagcccccgctgggccgaggggcctttctc
agtcgccacagcctggacatgaagttcacatactgcgacgagaggattgcagaagttgct
ggctacagtcctgatgacctgattggctgttctgcctatgaatacatccacgctttggac
tctgatgcggtcagcaggagcatccacactttgttgagcaagggccaggcagtaacgggg
cagtatcgcttcctggcccggactggaggctatctgtggactcagactcaggctacagtg
gtgtcaggggggcggggcccccagtcggaaagtatcatctgcgtccacttcctgatcagc
cgtgtagaagagaccggagtggtgctgtctctggaacaaacggagcaacatactcgcaga
ccccctcggctgagtgcctcctcgcagaagggtatccctggcaacagtgtagactctcct
gctccgcggatcctggccttcctgcaccctccggccctgagtgaggcctccctggctgct
gaccctcgccgtttctgtagtccagacctgcgccgcctcatggcacccatcctggatgga
cctcccccagctgccacgcccagcaccccacaagctacacggagaccccaaagtcctctt
ccggctgatctcccagataagttgacagtgggcttggaaaatgcgcacagactctccact
gcccagaaaaacaagaccgtggagacagatctagatatagctcaggaccctgacactctg
gacttggagatgctggccccctacatctccatggatgatgacttccagctcaactccagc
gagcaattgcccaaagtccaccgcagacctcccagggtggcccgcaggccccgtgctcgg
agcttccatggcctgtcgcctcctatccctgagccctccctactaccccgctgggggagt
gatccacgactgaactgttccagtccttccaggggcgatcgccccacagcctccctgatg
cctggaactcggaagagggccttggcccagagctcagaggacaaagggttggagctgctg
gaaactaagccgcccaagcggtccccaagactagaacctggaagcttcctgctgcctccg
ctcagcctgagtttccttctgcaaggtcgacaactcccggggaaccagcaggatcccaga
gcccccctcgtgcattctcatgagcccttgggcctagctccctcgctgctctctctctgc
cagcatgaggaaactgtccagcccaggaaccgcttcccgccagcagcaggcttgggccag
acccactga
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