Mus musculus (house mouse): 53611
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Entry
53611 CDS
T01002
Symbol
Vti1a, 1110014F16Rik, 1110018K19Rik, 4921537J05Rik, MVti1, MVti1a, Vti1, Vti1-rp2
Name
(RefSeq) vesicle transport through interaction with t-SNAREs 1A
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
53611 (Vti1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmu04131
]
53611 (Vti1a)
Membrane trafficking [BR:
mmu04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
53611 (Vti1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
LMBR1
Fusion_gly
Mer2
Peptidase_S46
DUF5344
Cir_Bir_Yir
FapA
Orf78
BPS1
Motif
Other DBs
NCBI-GeneID:
53611
NCBI-ProteinID:
NP_058558
MGI:
1855699
Ensembl:
ENSMUSG00000024983
UniProt:
O89116
Q5FWJ7
Structure
PDB
LinkDB
All DBs
Position
19:55304489..55615893
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AA seq
217 aa
AA seq
DB search
MSSDFEGYEQDFAVLTAEITSKIARVPRLPPDEKKQMVANVEKQLEEARELLEQMDLEVR
EIPPQSRGMYSNRMRSYKQEMGKLETDFKRSRIAYSDEVRNELLGDAGNSSENQRAHLLD
NTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARDRLRDADANLGKSSRI
LTGMLRRIIQNRILLVILGIIVVIAILTAIAFFVKGH
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccgacttcgaagggtacgagcaggacttcgcagtgctcactgctgagatcacc
agcaagattgcaagggtccctcggctccctcccgatgagaagaagcaaatggttgccaat
gtggagaaacagcttgaagaggccagagaactgcttgaacagatggatttggaagttcga
gaaattccaccccaaagtcgaggaatgtatagcaacaggatgagaagctacaagcaagaa
atggggaaactggaaacggattttaaaaggtcacggatcgcctacagtgacgaagtacgg
aatgagctcctaggggatgctgggaattcctccgagaaccagagggcacatctgctggat
aacacggagaggctggaaaggtcgtctcggagactagaggctgggtaccagatagcagtg
gagactgagcaaatcggccaagagatgttggaaaacctgagtcatgacagagaaaagata
cagcgggcacgtgaccgactccgggacgcagatgcaaacctggggaagagctctcggatt
ctgacggggatgctgcgaagaatcatccagaaccgtatcctgctcgtcatcttggggatc
atcgtggtcatcgccatcctgacggccatcgcgtttttcgtcaaaggacactga
DBGET
integrated database retrieval system