Mus musculus (house mouse): 53621
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Entry
53621 CDS
T01002
Symbol
Cnot4, Not4, Not4h, Not4hp
Name
(RefSeq) CCR4-NOT transcription complex, subunit 4
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
53621 (Cnot4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmu03000
]
53621 (Cnot4)
03019 Messenger RNA biogenesis [BR:
mmu03019
]
53621 (Cnot4)
04121 Ubiquitin system [BR:
mmu04121
]
53621 (Cnot4)
Enzymes [BR:
mmu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
53621 (Cnot4)
Transcription factors [BR:
mmu03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
53621 (Cnot4)
Messenger RNA biogenesis [BR:
mmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
53621 (Cnot4)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
53621 (Cnot4)
Ubiquitin system [BR:
mmu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
53621 (Cnot4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-CCCH_2
Rtf2
DZR_2
Nup35_RRM_2
zf-C3HC4
Torus
zf-UDP
Motif
Other DBs
NCBI-GeneID:
53621
NCBI-ProteinID:
NP_058573
MGI:
1859026
Ensembl:
ENSMUSG00000038784
UniProt:
Q8BT14
Structure
PDB
PDBj
LinkDB
All DBs
Position
6:complement(34999000..35110646)
Genome browser
AA seq
575 aa
AA seq
DB search
MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
PEDPAVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRL
ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV
VDGRTLKASLGTTKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
LQELYKLNPNFLQLSTGSVDKNKNKVTPLQRYDTPIDKPSDSLSIGNGDNSQQISNSDTP
SPPPGLSKSNPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQT
PSDWPTAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIE
KELSVQDQPSLSPTSLQNASSHTTTAKGPGSGFLHSAAPTNANSLNSTFSVLPQRFPQFQ
QHRAVYNSFGFPGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPPQHNTGLGGIP
IAGEEEVKVSTMPLSASSHSLQQGQQPTSLHTTVA
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcagtcctgatgcaaaggaagaccctgtggaatgccctctttgcatggagccc
ttggaaatagatgatattaactttttcccttgcacctgtggctaccagatatgccgattt
tgttggcatcgaattcgcactgatgagaatgggctttgtcctgcatgtagaaaaccatat
ccagaagatccagcagtttacaaaccactttcccaggaagaattacaaaggataaagaat
gagaaaaaacagaaacaaaatgaaagaaaacagaaaatctcagaaaatagaaaacatttg
gctagtgtacgtgttgtacaaaaaaaccttgtgtttgttgtaggtctgtcacagcgccta
gcagacccagaagttttaaaacgaccagagtattttgggaagtttggtaaaatacataaa
gttgtcatcaataatagcacatcctatgcaggctcacagggtccgagtgccagtgcttat
gtaacgtatatccggtcagaagatgctctcagagcaatacagtgtgtcaacaatgtggta
gtagatggcaggacactaaaggcatctttaggtacaacaaagtactgcagttatttctta
aagaacatgcagtgcccaaagcctgactgcatgtatcttcatgaattgggagatgaggca
gccagcttcacaaaagaggaaatgcaggcgggtaagcaccaagaatatgaacagaagctc
ctccaagaattatataaattaaatcccaattttcttcagctatctacgggttcagttgat
aagaataagaacaaagtgacaccattacaaaggtatgatacccccattgacaaaccttca
gattctctcagtatagggaatggtgataattcccaacagatatctaacagtgatacgcct
tcaccaccacctggtttatcaaaatccaaccctgtcatccccatcagttcatccaatcac
agtgcgaggtctccttttgaaggggcagtaacagagtcacagtcattattctcagacaat
tttcgccaccccaaccctataccaagtgggcttcctccttttcccagctctccacagaca
cccagtgattggcctacagctccagaaccacagagcctcttcacatcagaaacaatccca
gtttcatcatctacagactggcaagcagcattcggctttggttcttctaaacaaccagag
gatgacttggggtttgacccctttgatgtcactcgaaaagccttagcagacctgattgag
aaggaactatccgtccaagatcaaccttccctttcccccacatctcttcagaacgcctcc
tcacacactacgaccgccaaagggccaggctctggattcctgcactctgctgcacctaca
aatgccaactctctcaatagtaccttttcagtcttgccacagaggttccctcaatttcag
cagcaccgagcagtttataattcgttcggttttccaggccaggcagcccgctatccttgg
atggcctttccacgcaatagcatcatgcacttgaaccacacagcaaaccccacctcaaat
agtaatttcttggacttgaatctcccgccacagcacaacacaggtctgggagggatcccc
atagcaggggaagaagaggtgaaggtttcgaccatgccactgtccgcctcttcccattca
ttacaacaaggacagcagcctacaagtctccacactactgtggcctga
DBGET
integrated database retrieval system
