Mus musculus (house mouse): 53867 Help Entry 53867             CDS       T01002                                  Symbol Col5a3 Name (RefSeq) collagen, type V, alpha 3   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism mmu  Mus musculus (house mouse) Pathway mmu04820   Cytoskeleton in muscle cells mmu04974   Protein digestion and absorption Brite KEGG Orthology (KO) [BR:mmu00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     53867 (Col5a3)  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     53867 (Col5a3)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:mmu00536]     53867 (Col5a3) Glycosaminoglycan binding proteins [BR:mmu00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    53867 (Col5a3) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI Laminin_G_2 Laminin_G_3 Laminin_G_1 Motif Other DBs NCBI-GeneID:  53867 NCBI-ProteinID:  NP_001304317 MGI:  1858212 Ensembl:  ENSMUSG00000004098 UniProt:  Q9JLI2 LinkDB All DBs Position 9:complement(20681353..20726363) Genome browser AA seq 1738 aa AA seqDB search MRSCRRLDQLQAGLCLLLASLQLVSWTLAEPVDVLEAWGVHRDQAGVAEGPGFCPLRIPQ GDRAFRVGKSSLLSVPTWQLFPDGHFPENFSVLLTLRAQPANQSVLLSIYDEKGVRQLGL ALGPALGLLGDSFRPLPKQVNIMDGRWHRVAVSISGNKVTLVVDCEPQPPTFGQGPRFIS TAGLTVMGTQDTREESFEGDIQELLLIPDPQAAFQACESYLPGCETLDSTTTGAPKDDEP ETPAPRRRKGKGKKKGRGRKGKGRKKNKETSELSPTPGAPENQTSLHIPETEKTVPHLPL TPTPLAITTTVTIGQNATVSQGLDSGTETEQTTPEVDSTEEGEGGGPTMGPKFRAAEQSL QTEFQIFPGAGEKGAKGEPATVEQGQQFEGPAGAPGPRGISGPSGPPGPPGFPGDRGLPG PAGLPGIPGIDGARGLPGTVIMMPFHFASSSMKGPPVSFQQAQAQAVLQQAQLSMKGPPG PVGLTGRPGPVGLPGYPGLKGELGEVGPQGPRGLQGPPGPPGREGKTGRAGADGARGLPG DTGPKGDRGFDGLPGLPGEKGQRGDFGRVGQPGPPGEDGVKGLQGPPGPTGQAGEPGPRG LIGPRGLPGPLGRPGVTGSDGAPGAKGNVGPPGEPGPPGQQGNHGSQGIPGPQGPIGTPG EKGPPGNPGIPGVPGSEGPPGHPGHEGPTGEKGAQGPPGSAGPRGYPGLRGVKGTSGNRG LQGEKGERGEDGFPGFKGDEGPKGDRGNPGPPGPRGEDGPEGQKGPGGLPGDEGPPGAAG EKGKLGVPGLPGYPGRPGPKGSIGFPGPLGPLGEKGKRGKAGQPGEEGERGTPGTRGDRG QPGATGQPGPKGDVGQNGSPGPPGEKGLPGLQGPPGFPGPKGPPGPQGKDGISGHPGQRG ELGFQGLTGPPGPAGVLGPQGKVGDVGPLGERGPPGPPGPPGEQGLPGIEGREGAKGELG PLGSVGKEGPPGPRGFPGPQGAPGDPGPIGLKGDKGPPGPVGANGSPGERGPVGPSGGIG LPGQSGGQGPIGPAGEKGSPGERGTPGPTGKDGIPGPPGLQGPSGAAGPSGEEGDKGEVG MPGHKGSKGDKGDAGPPGPTGIRGPAGHSGLPGADGAQGRRGPPGLFGQKGDDGVRGFVG VIGPPGLQGLPGPPGEKGEVGDVGSMGPHGAPGPRGPPGPSGSEGPPGLPGGVGQPGAVG EKGEPGDAGDAGPPGIPGIPGPKGEIGEKGDSGPSGAAGPPGKKGPPGEDGSKGNMGPTG LPGDLGPPGDPGVPGIDGIPGEKGNAGDIGGPGPPGASGEPGARGLPGKRGSPGRMGPEG REGEKGAKGDAGPDGPPGRTGPIGARGPPGRIGPDGLPGIPGPVGEPGLLGPPGLIGPPG PLGPPGLPGLKGDAGPKGEKGHIGLIGLIGPPGEAGEKGDQGLPGVQGPPGLQGDPGLPG PVGSLGHPGPPGVVGPLGQKGSKGSPGSLGPRGDPGPAGPPGPPGSPAEVHGLRRRRSVT DTLEGGLEEVMASLNSLSLELQQLQRPLGTAESPGLMCRELHRDHPHLPDGEYWIDPNQG CARDAFKVFCNFTAGGETCLYPDKKFETVKLASWSREKPGGWYSTFRRGKKFSYVDADGS PVNVVQLTFLKLLSAAAHQRFTYICQNSVAWLDEAAGDHRHSIRFQGTNWEELSFNQTTA ATIKVSHDGCRVRKGQAKTLFEFSSSVGFLPLWDVAASDFGQTNQKFGFELGSICFSS NT seq 5217 nt NT seq  +upstreamnt  +downstreamnt atgagaagctgccggagactggatcagcttcaggccggcctctgcctgctcctggcctcc ctgcagctcgtgtcctggacgctggctgaacctgtggacgtactggaagcctggggtgtg catagagaccaggctggggtggctgaagggcctggcttctgccccctgaggattccacag ggtgaccgagcattcagggtgggcaagtccagccttctcagtgtccccacgtggcagctc ttcccagatgggcattttcctgagaacttttctgtgctgctcacactgagggcccagcca gccaatcagtctgtccttctgtctatttatgatgagaagggtgtccggcagctggggctg gcactggggccagctctgggcctccttggtgactccttcaggcccctccccaagcaagtc aacattatggatggcaggtggcaccgtgtggcagtcagcatcagtggtaacaaggtgacc ctggtggttgactgtgaaccgcagcccccaacatttggtcaggggcctcggtttataagt acagctggactcactgtgatgggaacccaggacaccagggaagagtcttttgagggagac atccaggagctgctgttaattccagaccctcaggctgccttccaggcctgtgagagctac ctccctggttgtgaaaccctcgattccacaaccacaggggcccccaaagacgatgaacca gaaacccctgcccctcgtcgtcgaaagggcaaagggaagaaaaaagggcggggtcgaaag ggcaagggaagaaagaaaaacaaggagacctcagagctgagtccgacccctggtgcccct gagaaccagacctccctccacatccctgagacagagaagacagttccccacctgcctctg actcccacacctctggccatcaccaccactgtcacgattggacaaaatgccacagtctcg caggggttggactccggtactgaaaccgagcagacgactccagaggtggactctactgag gagggtgaaggaggtggccccaccatgggccccaagttccgggcagcagagcagtcctta cagactgagttccagatctttcctggtgctggagaaaagggagcgaaaggagagcctgcg acagtagagcagggacagcagtttgaggggcctgcaggagctccaggaccccggggaata tctggtccttcaggccctcctgggcctccgggcttccctggggaccgtggtctaccgggt cctgccggcctcccaggaatcccaggcatcgatggagcccggggcctgccgggcacagtg attatgatgccgttccattttgcaagcagctcgatgaagggacccccagtgtccttccag caggcccaggcccaggcagtattgcaacaggctcagctgtccatgaaagggccccctggt ccagtagggctcactgggcgcccaggccctgtgggcctccctggatatccaggtctgaaa ggtgaactgggagaagtggggccacagggcccccgaggattacagggccctcctgggcct cctggacgggaaggcaagacaggccgagctggagcagatggggctcgggggctcccggga gacacaggacctaagggtgacaggggctttgatggcctgcccgggctgcctggtgagaag ggccaaaggggtgactttggacgagtagggcaacctggtcccccaggagaggatggtgta aagggcctgcagggacctccagggcccactggccaggctggagagccgggtccccgaggt ctgattggccccagaggtctcccaggtcccctaggacgcccgggtgtgacagggagtgat ggcgcaccaggggccaaaggcaacgtgggtcctcctggagaaccaggacccccaggacag caaggaaaccacggctcccagggaattccaggcccccaggggcccattggcactcccggg gaaaagggtccccctggaaaccccggaattccaggtgtcccaggatctgagggccccccg ggccacccaggccacgagggtcccacaggagaaaaaggggctcagggcccaccaggatca gcaggccctcggggctatcctggacttcgtggtgtgaagggtacctctggtaaccggggt ctccaaggcgagaaaggagaaaggggagaggatggctttcctggcttcaagggtgatgag ggaccaaaaggcgaccggggaaaccccggacccccaggtcccagaggagaggatggtcca gaaggacaaaaggggcctgggggactgcctggtgatgagggtcctccaggagcagcaggg gagaagggcaagcttggggtgccaggtctcccaggttatccaggacgcccaggacctaag ggatctattggatttcctggacccttgggaccactgggggagaaaggcaagcggggcaaa gcaggacagccaggagaggaaggagaacgcggcacaccgggcacccgaggagacagggga cagccgggggccacaggccagcctggccccaagggtgacgtgggccagaatgggtctcct gggccccctggagaaaagggtctacccggtcttcaaggcccaccaggattccccggacca aaaggccccccgggtcctcaggggaaagatgggatatctgggcaccctggacaaagagga gaattgggcttccaaggtctgacaggcccccctggaccagctggcgtccttggtcctcag ggaaaggtaggggacgtggggcctctaggcgagagaggccccccagggcctcctggacct cctggtgaacaaggtctgccaggcatagaaggcagagaaggggccaagggtgagctagga cccctggggtccgtcgggaaggaggggccacctgggcccaggggcttccctggcccccaa ggagcccccggagacccaggacccattggtttgaagggtgacaaaggtcccccaggccct gttggggcaaatggctccccgggagagcgtggtcctgtaggcccctctggtggcattggg cttcctggccagagtggagggcaaggccctattggtcctgctggcgagaaggggtccccg ggagaacggggtactcctggtcctactggcaaagatggtattccaggacccccggggctt cagggcccctctggagctgcggggccttctggggaagaaggagacaagggggaagtaggg atgcctggtcacaaaggaagcaaaggggataaaggagatgcaggcccacctggaccaaca ggaataagaggtccagcaggccattcaggcctcccgggtgctgatggcgctcagggtcgc cggggaccccctggcctcttcgggcagaagggggatgacggagttcgaggctttgtaggt gtaattggtcctccaggtctgcaggggctgccgggtcctccgggggagaagggcgaggtt ggagacgtaggatccatgggtccacatggagctccaggccctcggggtccccctgggccc agtggatcagagggccccccaggtctgcctggaggagtaggacagcctggtgctgtgggc gagaagggtgagccaggggatgctggagacgccggacccccaggaattcccggcatccct gggcccaaaggtgaaattggtgaaaagggggattcgggtccatcaggggctgctggtccc ccaggcaagaaaggacccccaggagaggacggctctaaggggaacatgggtcccacagga ctccctggagatctagggcccccaggagaccctggagttccgggtattgatggcatccca ggggagaagggaaatgctggtgatattgggggaccggggccacctggagcttccggggaa cctggtgcccgtggcctccctggcaagaggggttcccctggccgcatgggtccagaagga agagagggcgagaaaggcgccaagggagatgctggtcctgatggacccccaggcaggaca ggccccattggggctcgagggccccctggacgaattgggcctgatggtcttccagggatc cctggtcctgtgggtgaaccaggtctcctgggacctcctgggctaatcggccctccaggg cccctgggcccacctggcctccctggcctgaagggagatgctggccccaagggggagaag ggccacattgggctaataggcctcattggtcccccaggggaggccggtgagaaaggcgat caggggttgccaggtgtgcagggccccccaggccttcagggagaccctggtctccctggt cctgttggctcgttaggtcaccctgggcccccaggtgtggtgggccctctgggacagaag ggctccaaagggtccccgggatctcttggtcctcgtggagaccctggaccagcgggtcct cctggtcccccgggttctccggctgaggtgcatggcctgcgcaggcgccgatctgtgacg gacaccctggaaggtggcctggaggaggtgatggcctcactgaattcactgagcttggag ctgcagcagttgcagagacctctgggcacagccgagagcccaggcctcatgtgccgagag cttcaccgcgaccacccacacctgcccgatggagagtactggattgaccccaatcagggc tgtgcacgtgacgccttcaaggttttctgcaacttcacggcaggaggtgagacctgtctc tatccagacaagaagtttgagacggtgaaactggcctcgtggtcccgagagaagcctgga ggctggtacagcaccttccgccgagggaagaagttctcctatgtggatgctgatggctcc ccggtgaatgtggtccagttgaccttcctgaagttgttgagtgctgcagcccatcagagg ttcacttacatctgccagaactcggtggcatggctggatgaagctgcgggtgaccacagg cactccatccgcttccaagggaccaactgggaagagttgtccttcaaccagacaacagca gctaccatcaaggtctcccatgatggctgtcgggtccggaagggacaggcgaagaccctc tttgaattcagctcttctgtgggtttcctgcctctgtgggatgtggctgcctctgacttt ggtcagacgaaccaaaagtttgggtttgaactcggctccatctgctttagcagctga

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