Mus musculus (house mouse): 53970
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Entry
53970 CDS
T01002
Symbol
Rfx5
Name
(RefSeq) regulatory factor X, 5 (influences HLA class II expression)
KO
K08061
regulatory factor X 5
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu04612
Antigen processing and presentation
mmu05152
Tuberculosis
mmu05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
53970 (Rfx5)
09160 Human Diseases
09171 Infectious disease: bacterial
05152 Tuberculosis
53970 (Rfx5)
09163 Immune disease
05340 Primary immunodeficiency
53970 (Rfx5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmu03000
]
53970 (Rfx5)
Transcription factors [BR:
mmu03000
]
Eukaryotic type
Other basic domains
RF-X
53970 (Rfx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX5_DNA_bdg
RFX5_N
RFX_DNA_binding
Pox_D5
Motif
Other DBs
NCBI-GeneID:
53970
NCBI-ProteinID:
NP_059091
MGI:
1858421
Ensembl:
ENSMUSG00000005774
UniProt:
Q9JL61
LinkDB
All DBs
Position
3:94861355..94868685
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AA seq
658 aa
AA seq
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MAEDKPDAKSPKTGARPQGGADAGEPTTLLQRLRGTISKAVQNKVEGILQEVQKFSDNDK
LYLYLQLPSGPSVGEKSSEPSLLSNEEYMYAYRWIRNHLEEHMDTCLPKQSVYDAYRKYC
ESLACCRPLSTANFGKIIREIFPDIKARRLGGRGQSKYCYSGIRRKTLVSMPPLPGLDLK
GSESPEMGPEVSPAPRDELVEAACALTCDWAERILKRSFSSIVQVARYLLQQHLISARSA
HAHVLKAGGLAEEDERAPRERSLCKSKNVVESLEGGGPKKPERPAQPPKEQEARAGTDLP
GRAERKKSVIDSSVPAASKPQVNALVARLPVLLPRAPRSLITPISGTLKVATLPLPTRVG
GPQTAVPIINMILPPVPTLSGAGPGPGPGLGPRFGPGPGLGPGPGPGLGAGLGPGLGPGL
GAGPGPGLGAGLGAGLGLGPGRVPPRAPILPRGAENREVGISSDPRPHDKGIKRTAEVPL
SEASGQDPPVKEMKHETQDTTVSEAKRKRGRPRKKPGGSGERNATPEKSAAIVNSPRSPR
LLWETWGSKRENNFIGRPEGPGPGGEAERETVLVQGQQDGAVSKGERSLSSQEAKEAEDK
IPPVTSKVSVIKGRIQKEALQLVKGEADAATQGNKGLKGRVLQSSLTPEHKDPKATPP
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagataaacctgatgctaagagccccaagactggggcaaggccccaaggtggt
gctgacgctggagaacctaccaccctcctccaaaggctccgaggtaccatttccaaggcc
gtgcagaacaaagtagagggaattctgcaagaagtacagaaattctcggacaacgacaag
ctgtacctctaccttcagctcccatcggggcccagcgttggcgagaagagctcagagcca
agtctgctcagcaatgaggagtatatgtatgcctataggtggatccgcaaccacctggaa
gagcacatggatacctgcctgccaaagcagagcgtctatgatgcctatcgaaagtactgc
gagagcctcgcctgttgccgcccgctcagcacagccaacttcggtaaaatcatcagagag
atcttccctgacatcaaggcccgaagactcggtggccggggccagtccaaatattgctac
agtggcattcgaaggaagaccttggtatccatgccaccattgcctggactcgacttgaag
ggatctgaaagtccagaaatgggcccagaagtaagcccagcacctcgggatgaactggta
gaagcagcctgtgccctgacttgtgactgggcagagcggatcctgaagcggtccttcagt
tccatcgtccaggtcgcccgctacctcctgcagcagcatctcatctctgcccggtcggca
catgctcatgtgcttaaggccggggggcttgctgaagaggatgaaagagcccctcgagaa
cggtcattatgtaagtccaagaatgtcgtagaaagcctggaagggggaggccctaagaaa
ccagagagaccggcccagcctcctaaagagcaagaagcccgagctgggacagaccttcca
gggcgtgcagaacggaagaagagtgtaattgacagctcggttccagcagccagtaagcca
caagttaatgctcttgtggcccgactgcctgtgctgcttccaagagcaccacgatcactt
atcacacccatttcaggcactctgaaagtagctacgctgcctctacccactagggttgga
gggccccagacagctgtgcccatcatcaacatgatcttaccacctgttcctactttgtca
ggggctgggcctgggcctgggcctggccttgggcctaggtttgggccagggcctgggctt
gggcctgggccggggcctggtctgggggctggtctggggcctgggttagggcctgggctt
ggagctggaccagggcccgggcttggagctgggcttggggctggcctagggcttgggcct
gggcgagttccacctagagcacccattctgcctcgaggtgcagagaacagggaggtaggc
ataagtagtgatccaagacctcatgacaagggtatcaaaaggacagctgaagtgcctctg
agtgaggccagtgggcaggacccaccagttaaagaaatgaagcacgaaacacaggatact
acagtaagtgaagcaaaaaggaagcgaggacgccctcgaaagaagccaggagggagtggg
gaaagaaacgctactcctgagaagtctgcagctattgtgaactctccccgatccccaagg
ctactctgggagacatggggctcaaaaagagaaaacaacttcattgggagaccagaagga
ccagggccagggggtgaggctgagcgggaaacagtgcttgtgcaaggtcagcaagatggt
gctgtttccaaaggagaaaggagcttgagttcccaggaagccaaagaagcagaagataaa
attcctcctgtcacttcaaaagtgagtgttatcaagggcagaattcaaaaagaggctctt
cagttggtaaagggagaggctgatgctgcaacacagggcaacaaagggttaaagggtcgt
gtacttcaaagttccctaacccctgagcataaagaccccaaagcaacacccccatga
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