Mus musculus (house mouse): 55983
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Entry
55983 CDS
T01002
Symbol
Pdzrn3, 1110020C07Rik, LNX3, SEMACAP3, Semcap3
Name
(RefSeq) PDZ domain containing RING finger 3
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
mmu
Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmu04121
]
55983 (Pdzrn3)
Enzymes [BR:
mmu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
55983 (Pdzrn3)
Ubiquitin system [BR:
mmu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
55983 (Pdzrn3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
Sina_ZnF
zf-TRAF
zf-C3HC4_4
zf-RING_5
TRAF3_RING
Prok-RING_4
PDZ_Tricorn
zf-rbx1
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
55983
NCBI-ProteinID:
NP_061372
MGI:
1933157
Ensembl:
ENSMUSG00000035357
UniProt:
Q69ZS0
Q3UPS8
LinkDB
All DBs
Position
6:complement(101126568..101354858)
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AA seq
1063 aa
AA seq
DB search
MGFELDRFDGDVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRL
SAKELNHVLPLKRLILKLDIKCAHAARGCGRVVKLQDLPEHLERCDFAPARCRHAGCGQL
LLRRDVEAHMRDACDARPVGRCQEGCGLPLTHGEQRAGGHCCARALRAHNGALQARLGAL
HKALKKEALRAGKREKSLVAQLAAAQLELQMTALRYQKKFTEYSARLDSLSRCVAAPPGG
KGEETKSLTLVLHRDSGSLGFNIIGGRPCVDNQDGSSSEGIFVSKIVDSGPAAKEGGLQI
HDRIIEVNGKDLSRATHDQAVEAFKTAKEPIVVQVLRRTPRTKMFTPASESQLVDTGTQT
DITFEHIMALTKMSSPSPPVLDPYLLPEEHPASHDYYDPNDYMGDIHQDMDREELELEEV
GLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN
REEAVALLTSEENKNFSLLIARPELQLDEGWMDDDRNDFLDDLHMDMLEEQHHQAMQFTA
SVLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDESTRNDESSEQENNGEDATASANPL
AGQRKLTCSQDTLGSGDLPFSNESFISADCTDVDYLGIPEDECERFRELLELKCQVQSAS
PYSLYYPSSPLDAAGKSDPESVDKELELLNEELRSIELECLSIVRAHKMQQLKEQYRESW
MLHHSGFRNYNTSVDVRRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLEISPDNSL
RRVAEGSSEGATANIEAYRPSPKNLLAITEDPEVSTPSYNPSAKELDPSQALEIKERRGS
DGSRSPTASPKLGNAYLPSYHHSPYKHAHIPAHAQHYQSYMHLIQQKSAVEYAQSQMSLV
SMCKDLNSSNSVEPRMEWKVKIRSDGTRYITKRPVRDRLLRERALKIREERSGLTTDDDA
MSEMKMGRYWSKEERKQHLVKAKEQRRRREFMMQSRLDCLKEQQASDDRKEMNILELSHK
KMMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcgagttggatcgcttcgacggcgacgtggaccctgatctgaagtgcgccttg
tgccacaaggtcctggaggacccgctgaccaccccgtgcggccacgtattctgcgccggc
tgcgtgctgccctgggtagtgcaggagggcagctgccccgcgcgttgtcgcggtcgccta
tcggccaaggagctcaaccacgtcctgcccctcaagcgtctcatcctcaagttggacatc
aagtgcgcgcacgcggcgcggggctgcggccgggtggtcaagttgcaggacttgcccgag
cacctggagcgctgcgacttcgcgcccgcgcgctgccgccacgcgggctgcggccagctg
ctgctgcgacgcgacgtggaggcccacatgcgcgacgcgtgcgacgcgcggcccgtgggt
cgctgccaggagggctgcgggctgccgctgacgcacggcgagcagcgggcgggcggccac
tgctgcgcgcgggctctgcgggcgcacaacggagcgctgcaggcccgcctgggcgcgctg
cacaaggcgctcaagaaggaggcgctgcgggccggcaagcgcgagaagtcgctggtggcg
cagctggccgccgcgcagctcgaactgcagatgaccgcgctgcgctaccagaagaagttc
accgagtacagcgcgcgcctcgactcgctcagccgctgcgtggccgcgccgccaggcggc
aagggagaagagaccaaaagcctgactcttgtcctgcatcgggactctggctccctggga
ttcaatatcattggcggccgaccctgtgtggacaatcaagatggatcctccagtgaagga
atctttgtatccaaaatagttgacagcgggcctgctgccaaggaaggaggcctgcaaatt
catgacaggattattgaggtcaacggcaaagacttatcccgagcaactcatgaccaggct
gtggaagctttcaagacagccaaggagcccattgtggtgcaggtgttgaggaggacacct
cgaaccaagatgttcacgcctgcctcagagtcgcagctggtagacacgggcacccaaacc
gacatcacctttgagcacatcatggccctgacaaagatgtcttctcccagcccacctgtg
ctagacccctacctgctgcctgaagagcatcccgcatcccatgactactatgatcccaat
gactacatgggggatatccatcaggacatggacagagaagagctggagctggaagaagtg
ggcctctacaggatgaacagccaggacaagctgggtctcactgtgtgctaccggacggat
gacgaagatgacattgggatatatataagtgagattgaccctaacagcattgcagccaag
gatggacggatccgtgaaggagatcgcatcatccagattaatggcatcgaagtacagaac
cgtgaagaggccgtggcgcttctaaccagtgaagaaaacaagaacttttcattgctgatt
gcaaggcctgagctccagctggatgagggctggatggacgacgacaggaacgacttcctg
gatgacttacacatggacatgctggaggaacagcatcaccaggccatgcagttcaccgcc
agtgtgctccagcagaagaagcatgaggaagacggtgggaccacagacacagccaccatc
ttatccaaccagcacgagaaagacagtggtgtcgggcgaacggatgagagcacccgcaat
gatgagagctcagaacaggagaataacggtgaagatgctacggcatccgccaacccgctg
gcaggccagaggaagctgacctgtagccaggacaccctgggcagtggcgacctgcctttc
agcaatgagtccttcatctctgcggactgtaccgatgtggactacctgggcatcccagag
gatgagtgcgagcgttttcgcgaactgctggagctcaagtgccaagtgcagagcgccagc
ccctacagcctgtactaccctagcagcccactggatgctgctggcaagagtgaccccgag
agcgtggacaaggagctggagctactcaatgaggagttgcgcagcatcgagctggagtgc
ctgagcatcgtgcgcgcgcacaagatgcaacagctcaaggaacagtaccgtgagtcctgg
atgctgcaccacagtggcttccgcaactacaacaccagtgtggacgtgcgccgccatgag
ctctcggacatcactgagctgccggagaagtcagacaaggatagttcaagcgcctacaac
acgggggagagctgcagaagtaccccactcaccctggagatctctccggacaactccctg
cggagagtagccgagggcagtagtgaaggggccacagctaacatcgaagcttacaggcca
tcccccaagaatctgctcgccatcactgaggaccctgaagtaagcaccccaagctataac
cctagtgccaaagagctggaccccagccaggctttggagatcaaagaacgccgaggtagc
gatggcagcaggagccccaccgccagcccaaagctgggcaatgcctacctgccctcatac
caccactccccctacaaacacgcgcacatcccagctcacgcgcaacactaccagagctac
atgcacctgatccagcagaagtcagcagtggagtatgcgcagagccagatgagcctggtg
agcatgtgcaaggacttgaactcttctaactctgtggaacccaggatggaatggaaagtg
aagatccgcagtgacgggacgcgctacatcaccaagaggccggtgcgtgacaggctgctg
cgggagcgtgcgctgaagatccgcgaggagcgcagtggcctgaccacggatgatgacgcc
atgagtgagatgaagatggggcgctactggagcaaggaggagcgcaagcaacatctggtg
aaggccaaggagcagaggcggaggcgcgagtttatgatgcagagcaggctggattgtctg
aaggagcagcaggcctccgacgacaggaaggagatgaacatcctggaactgagccacaaa
aagatgatgaagaagaggaacaaaaagatctttgacaattggatgactatccaagaactc
ttaacccacggcacaaaatcgccagacggcactagggtatacaattccttcctgtcggtg
actactgtataa
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integrated database retrieval system
