Mus musculus (house mouse): 56045
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Entry
56045 CDS
T01002
Symbol
Samhd1, E330031J07Rik, Mg11, mSAMHD1
Name
(RefSeq) SAM domain and HD domain, 1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03250
Viral life cycle - HIV-1
mmu04623
Cytosolic DNA-sensing pathway
mmu05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
56045 (Samhd1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
56045 (Samhd1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
56045 (Samhd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmu03400
]
56045 (Samhd1)
DNA repair and recombination proteins [BR:
mmu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
56045 (Samhd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
HD
SAM_1
HD_assoc_2
PDEase_I
SAM_Ste50p
DUF4441
Motif
Other DBs
NCBI-GeneID:
56045
NCBI-ProteinID:
NP_061339
MGI:
1927468
Ensembl:
ENSMUSG00000027639
UniProt:
Q60710
Structure
PDB
PDBj
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All DBs
Position
2:complement(156939454..156977016)
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AA seq
627 aa
AA seq
DB search
MQSAPLEQPAKRPRCDGSPRTPPSTPPATANLSADDDFQNTDLRTWEPEDVCSFLENRGF
REKKVLDIFRDNKIAGSFLPFLDEDRLEDLGVSSLEERKKMIECIQQLSQSRIDLMKVFN
DPIHGHIEFHPLLIRIIDTPQFQRLRYIKQLGGGYYVFPGASHNRFEHSLGVGYLAGCLV
RALAEKQPELQISERDILCVQIAGLCHDLGHGPFSHMFDGRFIPRARPEKKWKHEQGSIE
MFEHLVNSNELKLVMKNYGLVPEEDITFIKEQIMGPPITPVKDSLWPYKGRPATKSFLYE
IVSNKRNGIDVDKWDYFARDCHHLGIQNNFDYKRFIKFARICEVEYKVKEDKTYIRKVKH
ICSREKEVGNLYDMFHTRNCLHRRAYQHKISNLIDIMITDAFLKADPYVEITGTAGKKFR
ISTAIDDMEAFTKLTDNIFLEVLHSTDPQLSEAQSILRNIECRNLYKYLGETQPKREKIR
KEEYERLPQEVAKAKPEKAPDVELKAEDFIVDVINVDYGMEDKNPIDRVHFYCKSNSKQA
VRINKEQVSQLLPEKFAEQLIRVYCKKKDGKSLDAAGKHFVQWCALRDFTKPQDGDIIAP
LITPLKWNNKTSSCLQEVSKVKTCLKF
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcgcacccttggagcagccagctaagcgaccccgctgcgatggcagcccaagg
acgccaccgagcactcctcctgcaacagctaatctgtctgcagacgacgacttccaaaac
accgacctccgaacctgggaaccggaggacgtgtgctccttcttagagaatcgtggtttc
cgagagaagaaagtgctggacatcttcagagacaataaaatcgccggctcgtttctgccc
tttttggatgaggatcgtctggaagatctgggagtaagttccttggaggagaggaagaag
atgatagaatgtatccagcagctgagtcagtctcggattgatctaatgaaggtatttaat
gatcccattcatggccacattgagttccaccctctccttatcagaatcatcgacacacct
cagttccagcgacttcgctatatcaagcagctggggggcggctactatgttttccctgga
gcgtcccacaatcgcttcgaacacagtctcggagtggggtacctagcaggctgcctggtg
cgagcacttgccgaaaaacagccagagctacagatcagtgagcgagatatactctgtgtt
cagattgcggggctctgccacgacctaggtcatgggccattttctcatatgtttgatgga
aggtttatcccacgggctcgcccagagaaaaagtggaagcacgaacagggctccattgag
atgtttgagcatctggtcaattctaatgaactcaaacttgtcatgaagaactatggtctc
gtccctgaagaagacattacctttatcaaggaacaaattatgggaccacctataacacca
gtcaaagattccttgtggccgtataaaggccgccctgccacgaagagcttcctttacgag
atagtgtctaacaagaggaatggcatcgacgtagacaaatgggattattttgccagagac
tgtcaccatcttggaatccaaaataattttgattacaagcgcttcattaagtttgcccgt
atctgtgaagtggagtacaaggtcaaggaggacaagacctacatccgtaaggtgaagcac
atttgttcgagagaaaaggaggttggaaatctgtatgacatgttccacactcgcaactgc
ttacaccgaagagcttaccaacacaagatcagcaacctcatcgacataatgattacagat
gccttcctcaaagcagacccctacgtggagattacagggactgccgggaagaagttccgc
atttccacagccattgatgacatggaagccttcactaagttgacggataacatttttctg
gaggttttacactctactgatccacagttgtctgaggcccaaagtattttaaggaacatt
gaatgccgcaatctatacaagtatttgggtgagacccagccaaagcgtgagaagattagg
aaggaagaatatgaacggcttccccaagaagttgctaaagccaaacctgaaaaagccccg
gatgttgaactgaaggccgaagatttcatagttgatgttatcaatgtggattatgggatg
gaagacaagaatccaatcgatcgtgttcacttctattgtaagagcaacagcaagcaagcg
gtcaggatcaataaagagcaggtgtcacaactgctgccagagaaatttgcagagcagctc
attcgggtgtactgtaagaagaaagacgggaagagcctggacgccgccgggaagcacttt
gttcagtggtgtgcgctcagggacttcaccaagccacaggatggtgacattatagctcca
ctcataacacctctgaaatggaataataagacttcatcttgcctccaagaagtatccaaa
gtaaaaacatgtctaaaattttaa
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