Mus musculus (house mouse): 56715
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Entry
56715 CDS
T01002
Symbol
Rabgef1, Rab5ef, Rabex5, Rin2
Name
(RefSeq) RAB guanine nucleotide exchange factor (GEF) 1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
56715 (Rabgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmu04131
]
56715 (Rabgef1)
Membrane trafficking [BR:
mmu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
56715 (Rabgef1)
Protein recycling
Other Rab GTPase associated proteins
56715 (Rabgef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
CID_GANP
SSTK-IP
Motif
Other DBs
NCBI-GeneID:
56715
NCBI-ProteinID:
NP_001185988
MGI:
1929459
Ensembl:
ENSMUSG00000025340
UniProt:
Q9JM13
LinkDB
All DBs
Position
5:130200644..130243178
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AA seq
491 aa
AA seq
DB search
MSLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQRQIQEDWELAER
LQREEEEAFASSQSSQGAQSLTFSKFEEKKTNEKTRKVTTVKKFFSASSRAGSKKEIQEA
KAPSPSINRQTSIETDRVTKEFIDFLKTFHKTGQEVYKQTKMFLEAMPYKRDLSIEEQSE
CTQDFYQNVAERMQTRGKVPPEKVEKIMDQIEKHIMTRLYKFVFCPETTDDEKKDLAIQK
RIRALHWVTPQMLCVPVNEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITRCSKHIFN
AIKITKNEPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLC
CAVAFIEKLDAQSLNLSQEDFDRYMSGQTSPRKQESESWPPEACLGVKQMYKNLDLLSQL
NERQERIMNEAKKLEKDLIDWTDGIAKEVQDIVEKYPLEIKPPNQPLAAIDSENVENDKL
PPPLQPQVYAG
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgaagtccgaacgcaggggaattcatgtggatcaatctgagctcctgtgcaag
aaaggatgcggttactacggcaaccctgcctggcagggtttctgctccaagtgctggagg
gaggagtaccacaaggcccggcagaggcagatccaagaggactgggaactggcagaacga
cttcagcgggaggaggaagaggccttcgcgagcagccagagcagccaaggagcccagtcc
ctcaccttctccaagttcgaggagaagaagaccaatgagaaaacccgaaaagtcaccaca
gtgaagaagttcttcagcgcctcttccagagctggatccaagaaggaaattcaggaagcc
aaagctcccagtccctccataaaccggcaaaccagcattgagacggaccgagtgactaag
gagttcatagactttctcaagaccttccacaagacaggccaagaagtctataaacagacg
aagatgtttttggaagcaatgccttataaaagggatttaagcatcgaggaacagtcagaa
tgtactcaggacttttaccaaaatgtggctgaaagaatgcagacccgtgggaaagtgcct
ccagagaaagtggagaagataatggatcagatcgaaaagcacatcatgacgcgtctctat
aaatttgtgttctgcccagagactactgatgatgagaagaaagatctcgccattcaaaaa
agaatcagggccctgcactgggtaacgcctcagatgctctgtgtccctgtcaatgaggaa
atccctgaagtgtccgacatggtggtgaaagcgatcacagacatcattgagatggactca
aagcgtgtgcctcgggacaagctggcctgcatcaccaggtgcagcaagcacatcttcaat
gccatcaagatcaccaagaatgagccagcctctgccgatgacttcctgcccaccctgatc
tacatcgtcctgaagggcaacccccctcgcctgcagtccaacatccagtacatcactcgc
ttctgcaaccccagccggctcatgacgggcgaggatggctactacttcaccaacctgtgc
tgtgctgtggctttcattgagaaattagacgcccagtctttgaatttaagtcaggaggat
tttgaccggtacatgtctggccagacatcccccaggaagcaggagtctgagagttggccc
ccggaggcctgcttaggtgtgaagcaaatgtataagaacttggacctcctgtctcagttg
aatgaacggcaagaaaggatcatgaacgaagccaagaaacttgaaaaagacttaatagac
tggacagacgggattgccaaggaagttcaagacattgttgagaaatacccactggagatt
aagcccccgaaccaacccttagcagccatcgactctgagaatgtggagaacgacaagctc
cctccccctctgcagcctcaggtgtacgcagggtga
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