Mus musculus (house mouse): 65945
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Entry
65945 CDS
T01002
Symbol
Clstn1, 1810034E21Rik, Cst-1, Cstn1
Name
(RefSeq) calsyntenin 1
KO
K22659
calsyntenin 1
Organism
mmu
Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mmu04515
]
65945 (Clstn1)
Cell adhesion molecules [BR:
mmu04515
]
Cadherins
Cadherin related
65945 (Clstn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
Laminin_G_2
CDC45
FAM176
EphA2_TM
Glyco_hydro_16
Toxin_R_bind_N
V_ATPase_I
Cadherin_C_2
SID-1_RNA_chan
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
65945
NCBI-ProteinID:
NP_075538
MGI:
1929895
Ensembl:
ENSMUSG00000039953
UniProt:
Q9EPL2
Structure
PDB
PDBj
LinkDB
All DBs
Position
4:149670536..149733356
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AA seq
979 aa
AA seq
DB search
MLRRPAPALAPAVRLLLAGLLCGGGVWAARVNKHKPWLEPTYHGIVTENDNTVLLDPPLI
ALDKDSPLRFAESFEVTVTKEGEICGFKIHGQNVPFDAVVVDKSTGEGIIRSKEKLDCEL
QKDYTFTIQAYDCGKGPDGTGVKKSHKATVHIQVNDVNEYAPVFKEKSYKAAVVEGKQHS
SILRVEAVDADCSPQFSQICSYEILTPDVPFTVDKDGYIKNTEKLNYGKEHQYKLTVTAY
DCGKKRATEDVLVKISVKPTCSPGWQGWSSRIEYEPGTGALAVFPSIHLETCDEPVASVQ
ATVELETSHIGKGCDRDTYSEKSLHRLCGAAAGTSELLPSPSSSFNWTVGLPTDNGHDSD
QVFEFNGTQAVRIPDGVVTLDPKEPFTISVWMRHGPFGRKKETILCSSDKTDMNRHHYSL
YVHGCRLVFLLRQDPSEEKKYRPAEFHWKLNQVCDEDWHHFVLNVEVPSVTLYVDGIPHE
PFSVTEDYPLHPTKIETQLVVGACWQEYSGVESGNETEPATMASAGGDLHMTQFFRGNLA
GLTVRSGKLADKKVIDCLYTCKEGLDLQVPEDANRGVQIQASSSQAVLTLEGDNVGELDK
AMQHISYLNSRQFPTPGIRRLKITSTVKCFNEAACIEVPPVEGYVMVLQPEEPKISLSGV
HHFARAASEFESAEGISLFPELRIISTITREVEPEADGSEDPTVQESLVSEEIVHDLDTC
EVTVEGDELNAEQESLEVDVTRLQQKGIEASHSDLGVVFTGVETMASYEEVLHLLRYRNW
HTRSLLDRKFKLICSELNGRYLSNEFKVEVNVIHTANPVEHANHMAAQPQFVHPEHRSFV
DLSGHNLANPHPFAVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQDTGKENE
MDWDDSALTITVNPMETYEDQHSSEEEEEEEEEEESEDGEEEEDITSAESESSEEEEGGP
GDGQNATRQLEWDDSTLSY
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgccgccctgcgcccgcgctggccccggccgtccggctgctgctggcggggctg
ctgtgcggcggcggggtctgggccgcgcgagttaacaagcacaagccatggctcgagccc
acctaccatgggatagtcaccgagaacgataacacggtgctgctcgaccctcccctcatc
gccctggataaagattcaccgctccgctttgcagagagttttgaggtgacagtcaccaaa
gaaggtgagatttgtggctttaaaattcacgggcagaatgtcccctttgatgccgtggta
gtggataagtccacgggtgagggaataatccggtcaaaagagaaactggactgtgaacta
cagaaagactacacattcaccatccaggcctacgactgcgggaagggccccgatggcacc
ggtgtgaaaaagtctcacaaagcgaccgtgcacatccaggtgaacgacgtgaacgagtac
gcccccgtgttcaaggagaagtcgtacaaggcggccgtggtggagggcaagcagcacagc
agcatcctcagggtggaggctgtggacgcagactgctccccgcagttcagccagatctgc
agctacgagattctcaccccagacgtgccgttcactgtggacaaagacggttatattaag
aacacagagaagctaaactatggcaaagagcatcagtataagctcacagtcacagcctac
gactgtgggaagaaaagagccaccgaggacgtcctagtgaagataagcgtcaagcccacc
tgcagccccgggtggcaaggctggagcagcagaattgagtatgagcccggcacgggtgct
ttggctgtcttcccgagcatccacttggagacctgtgacgagcctgtcgcctctgtgcag
gccacggtggagctggagaccagccacatagggaaaggctgcgaccgagatacctactct
gagaagtcccttcaccggctctgtggggctgctgccggcacctcagagctgctcccgtcc
cccagtagctccttcaactggactgtgggcctccccaccgacaacggccatgacagtgac
caggtctttgagttcaacggcacgcaggccgtgaggattccagacggcgttgtgaccctt
gaccctaaagaaccctttacaatctccgtgtggatgcggcatgggccgtttggccggaag
aaggagacaattctctgcagttcggataagacagatatgaaccgacaccattattcgctc
tacgtccacgggtgcaggctagttttcctcctccgtcaggacccgtctgaggagaagaaa
tacaggcctgcggagttccactggaagctgaaccaagtctgtgatgaggactggcaccac
tttgtcctcaatgtggaagttccaagtgtgactctctacgtggacggcatccctcatgag
cccttctctgtgacagaggactacccgcttcatccaaccaaaatagagactcagcttgtg
gtcggagcttgctggcaagagtattcaggagtggagagtggcaatgagactgagcctgcg
acgatggcctctgcaggtggcgacctgcacatgacacagtttttccgaggtaacctggct
ggcctcacagtccgttctgggaaactggcggataagaaggtgattgactgtctctacacc
tgcaaggaggggctggacctgcaggtccctgaagatgccaacagaggcgtgcagatccaa
gcaagctccagccaggcggtcttgaccttggagggagacaacgttggagagctggataag
gctatgcagcacatttcctaccttaactcaaggcagttccccacaccaggcatccgcagg
ctcaaaatcaccagcaccgtcaagtgtttcaacgaggcggcttgcatcgaggtgcccccg
gtggaaggctacgtgatggttttgcagccggaggagcctaagatcagcctgagtggcgtc
caccactttgcccgcgcagcttctgagtttgagagcgcggagggtatttccctcttccct
gagctgagaatcatcagcaccatcaccagagaggtggagcccgaggcagatgggtccgag
gaccccacagtgcaagaatccctggtgtcagaggaaattgtgcatgacctggacacctgt
gaggtcacagtggaaggggatgagctgaacgcagagcaggagagcctggaggtagacgtg
acccgcctccagcagaagggcatcgaagcaagccactctgacctgggtgtggtcttcaca
ggcgtggagaccatggcaagctacgaggaggttttgcacctccttcgctatcggaattgg
cacaccaggtccctgctggatcgcaagttcaagctcatttgctcagaactaaatggtcgc
tacctcagcaatgagttcaaggtggaggtgaatgtgatccacacagccaaccccgtggaa
catgccaaccacatggctgcccagccacagttcgtccaccctgaacatcgatcctttgtg
gacctgtctggtcacaacctggccaatcctcacccgtttgcagttgtccccagcacggcg
acagtggtgattgtggtgtgtgtcagcttcctggttttcatgatcatcctgggggtgttt
cggatccgggctgcacatcagcgaacgatgcgggaccaggacacggggaaggagaatgag
atggactgggatgactctgccttgaccatcaccgtcaaccccatggagacatatgaggac
cagcacagcagtgaggaggaggaagaggaggaggaggaggaggagagcgaagatggggag
gaagaggaagacatcaccagtgccgagtctgagagcagtgaggaggaggaaggaggcccc
ggagacggccagaatgccacccgacagctggaatgggatgactccacactcagctactaa
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