Mus musculus (house mouse): 66877
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Entry
66877 CDS
T01002
Symbol
Crnkl1, 1200013P10Rik, 5730590A01Rik, crn
Name
(RefSeq) crooked neck pre-mRNA splicing factor 1
KO
K12869
crooked neck
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
66877 (Crnkl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmu03041
]
66877 (Crnkl1)
03036 Chromosome and associated proteins [BR:
mmu03036
]
66877 (Crnkl1)
Spliceosome [BR:
mmu03041
]
Complex B
Other components
Prp19-related factors
66877 (Crnkl1)
Complex C
66877 (Crnkl1)
Chromosome and associated proteins [BR:
mmu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
66877 (Crnkl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT
TPR_14
TPR_19
Suf
TPR_16
TPR_17
U3_assoc_6
Mad3_BUB1_I
Motif
Other DBs
NCBI-GeneID:
66877
NCBI-ProteinID:
NP_080096
MGI:
1914127
Ensembl:
ENSMUSG00000001767
UniProt:
P63154
LinkDB
All DBs
Position
2:complement(145759402..145776620)
Genome browser
AA seq
690 aa
AA seq
DB search
MAASTAAGKQRIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPQQKITDEEELN
DYKLRKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLK
YAEMEMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQP
EEQAWHSYINFELRYKEVERARTIYERFVLVHPAVKNWIKYARFEEKHAYFAHARKVYER
AVEFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQEAQELFKNYTIFEKK
FGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEADTVREVYERAIANV
PPIQEKRHWKRYIYLWVNYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWLYYAQ
FEIRQKNLPFARRALGTSIGKCPKNKLFKGYIELELQLREFDRCRKLYEKFLEFGPENCT
SWIKFAELETILGDIERARAIYELAISQPRLDMPEVLWKSYIDFEIEQEETERTRNLYRQ
LLQRTQHVKVWISFAQFELSSGKEGSVAKCRQIYEEANKTMRNCEEKEERLMLLESWRSF
EDEFGTVSDKERVDKLMPEKVKKRRKVQADDGSDAGWEEYYDYIFPEDAANQPNLKLLAM
AKLWKKQQQEREAAEQDPDKDIDESESSSF
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggcagcctccacggcggccgggaaacagcgcattcctaaagtggccaaggtgaagaac
aaggcgccggccgaagtgcagataacggccgagcagctcctccgagaagctaaagagaga
gaactcgagctcctcccacctccacctcagcagaagatcacagatgaggaagaattaaac
gattacaaactccggaaaaggaagacttttgaagataacataagaaaaaataggactgtg
attagcaactggataaaatacgcacaatgggaggaaagtctaaaggaaattcaaagggct
cgatccatatacgagcgtgctttagatgtcgactaccgaaatattaccctctggctgaaa
tatgcagaaatggagatgaagaaccgccaggtcaaccatgcccgaaacatctgggaccgt
gccatcacaactctgccacgcgtcaaccagttctggtataagtacacatacatggaggag
atgttgggcaacgttgctggtgcccgccaggtgtttgagcgctggatggaatggcagcct
gaggagcaggcctggcattcctacatcaacttcgagctgagatacaaagaggtggagcgg
gcccgcaccatctatgaacgctttgtgctcgtgcaccctgctgtgaaaaactggatcaag
tacgcaagatttgaagagaagcatgcttactttgctcatgcgcggaaagtctacgagaga
gcggtggagttttttggggatgagcatatggacgaacacctctatgtggcctttgctaaa
tttgaggaaaaccagaaagaatttgaaagggtacgagttatctacaaatatgccctggat
aggatttcaaaacaagaggcccaagaactctttaaaaactataccatctttgagaagaag
tttggtgaccggaggggtatagaagacatcatcgtgagcaaacggaggttccagtatgaa
gaagaagtgaaggctaatccacacaattatgatgcatggtttgattatttacgcttggtg
gaaagtgatgcggaagctgacactgtgcgggaagtctatgagagagccattgccaatgtg
ccacccatccaggagaagagacactggaagcgctacatctacctttgggttaactatgca
ctctatgaagagctggaagccaaggatcccgagagaacaagacaggtatatcaagcgtct
ttggaactaattcctcacaaaaagttcacatttgccaaaatgtggttatattatgcacag
tttgaaataagacagaaaaatctgccatttgccagaagagctttgggaacttccataggc
aaatgtccgaagaacaagttattcaaaggatacatagaactggaactgcagcttcgagaa
tttgacagatgcaggaagctttatgaaaagtttttggaatttggacctgaaaattgtacc
tcatggattaagtttgcagaattagagacaatccttggtgatattgagagagctcgggca
atctatgaattagccatcagccagccacgcttggatatgccagaggtactttggaaatca
tatattgattttgagattgagcaggaagaaactgaaagaacacgaaacctttaccgacaa
ttgcttcagcgaacacagcatgtcaaggtatggatcagttttgctcagtttgagttatcg
tctgggaaagaaggaagtgtggctaaatgcagacagatttatgaagaagctaacaaaacc
atgagaaactgtgaagaaaaagaagagaggcttatgttgctggaatcctggagaagtttt
gaagatgaatttggcacagtatcagacaaggagagagtagacaaactcatgccagaaaag
gtcaagaagagaagaaaggtccaggccgacgatgggtctgacgccgggtgggaagaatac
tatgactacatcttcccagaggatgctgccaaccagcctaacctcaagctcctggccatg
gccaagctgtggaagaaacagcaacaggaaagagaagctgccgaacaggatccagataag
gacattgatgagagtgaatcctcatctttttaa
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integrated database retrieval system
