Mus musculus (house mouse): 66993
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Entry
66993 CDS
T01002
Symbol
Smarcd3, 1500001J14Rik, 2210409C08Rik, BAF60C
Name
(RefSeq) SWI/SNF related BAF chromatin remodeling complex subunit D3
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03082
ATP-dependent chromatin remodeling
mmu04714
Thermogenesis
mmu05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
66993 (Smarcd3)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
66993 (Smarcd3)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
66993 (Smarcd3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmu03021
]
66993 (Smarcd3)
03036 Chromosome and associated proteins [BR:
mmu03036
]
66993 (Smarcd3)
Transcription machinery [BR:
mmu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
66993 (Smarcd3)
Chromosome and associated proteins [BR:
mmu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
66993 (Smarcd3)
PBAF complex
66993 (Smarcd3)
GBAF(ncBAF) complex
66993 (Smarcd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
66993
NCBI-ProteinID:
NP_080167
MGI:
1914243
Ensembl:
ENSMUSG00000028949
UniProt:
Q6P9Z1
LinkDB
All DBs
Position
5:complement(24797620..24829649)
Genome browser
AA seq
483 aa
AA seq
DB search
MAADEVAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGSPYMGSPAVRPGL
APAGMEPARKRAAPPPGQSQAQGQGQPVPTAPARSRSAKRRKMADKILPQRIRELVPESQ
AYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNPAKPDAEDSDGSIA
SWELRVEGKLLDDPSKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQV
KRPGDLSVRCTLLLMLDYQPPQFKLDPRLARLLGLHTQSRSAIVQALWQYVKTNRLQDSH
DKEYINGDKYFQQIFDCPRLKFSEIPQRLTALLLPPDPIVINHVISVDPSDQKKTACYDI
DVEVEEPLKGQMSSFLLSTANQQEISALDSKIHETIESINQLKIQRDFMLSFSRDPKGYV
QDLLRSQSRDLKVMTDVAGNPEEERRAEFYHQPWSQEAVSRYFYCKIQQRRQELEQSLVV
RNT
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggacgaagttgccggaggggcgcgcaaagccacgaaaagcaaactttttgag
tttctggtccatggggtgcgccccgggatgccgtctggagcccgaatgccccaccagggg
gcgcccatgggccccccgggctccccgtacatgggcagccccgcggtacgacccggcctg
gcccccgcgggcatggagcccgcccgcaagcgagcagcgcccccgcccgggcagagccag
gcacagggccagggccagcccgtgcccaccgccccagcgcggagccgcagtgccaagagg
aggaagatggctgacaaaatcctccctcaaaggattcgggagctggtacccgagtcccag
gcttacatggacctcctagcatttgagaggaaactggatcaaaccatcatgcggaagcgg
gtggacatccaggaggccctgaagaggcccatgaagcaaaagcgaaagctgcgcctttat
atctccaatacttttaaccctgcgaagcctgatgcggaagactctgatggcagcattgcc
tcctgggagctgcgggtggaggggaagctcttggatgatcctagtaagcagaagaggaag
ttttcttccttcttcaagagtttggtcattgagttggacaaagacctttatggcccagac
aaccaccttgttgagtggcaccggacacccacaacccaggaaacagatgggttccaagtg
aagagaccaggggacttgagtgtgcgctgcaccctgctcctgatgctggactatcagcct
ccccagttcaaattggacccccgcttagcccggctgctggggttacacacacagagccgc
tcagccattgtccaggcactgtggcagtatgtgaagaccaacaggctacaggactcccat
gacaaggagtacatcaatggcgacaagtatttccagcagatttttgactgcccccgccta
aagttctctgagattccccagcgcctcacagccctgctgctgccccctgaccccattgtg
atcaaccacgtcatcagcgtggacccatcagaccagaagaagacagcgtgctatgacata
gatgtggaggtggaggaaccgctgaaagggcagatgagtagcttcctcctgtccacggcc
aaccagcaggagatcagtgctctggacagtaagatccatgagacgattgagtccataaac
cagctcaagatccagagggacttcatgctaagtttctccagagaccccaaaggctacgtc
caagacctgctccgctcccagagccgtgatctcaaggtgatgacagatgtggcagggaac
cccgaggaagaacgcagggctgagttctaccaccagccctggtcccaggaagccgttagc
cgctacttctactgtaagatccagcagcgcaggcaggagctggagcagtcgctggtcgtg
cgcaacacctag
DBGET
integrated database retrieval system
