Mus musculus (house mouse): 67207
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Entry
67207 CDS
T01002
Symbol
Lsm1, 2810025O06Rik, CASM
Name
(RefSeq) LSM1 homolog, mRNA degradation associated
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
67207 (Lsm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmu03019
]
67207 (Lsm1)
Messenger RNA biogenesis [BR:
mmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
67207 (Lsm1)
mRNA degradation factors
5'-3' decay
Lsm complex
67207 (Lsm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
67207
NCBI-ProteinID:
NP_080308
MGI:
1914457
Ensembl:
ENSMUSG00000037296
UniProt:
Q8VC85
Q544C9
LinkDB
All DBs
Position
8:26275326..26294003
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AA seq
133 aa
AA seq
DB search
MNYMPGTASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIP
RGIFVVRGENVVLLGEIDLEKESDTPLQQVSIEEILEEQRVQQQTRLEAEKLKVQTLKDR
GLSIPRADTLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactatatgcccggcaccgccagcctcatcgaggacatcgacaaaaagcacttggtc
ctacttcgagatggaagaacacttataggttttttaagaagcattgatcaatttgctaac
ttagtgctccatcagactgtggagcgaattcatgtgggcaaaaagtacggtgatattcct
cgagggattttcgtggtcagaggagagaatgtggtcctactaggagaaatagacctggag
aaggagagtgacacgccccttcagcaagtgtctattgaagagatcctagaggaacagagg
gtgcaacagcagaccagactggaggcagagaagctgaaggtccagacccttaaagatcgg
ggcctttccattcctcgcgcagacactctggacgagtactga
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integrated database retrieval system
