Mus musculus (house mouse): 67439
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Entry
67439 CDS
T01002
Symbol
Xab2, 0610041O14Rik
Name
(RefSeq) XPA binding protein 2
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
67439 (Xab2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmu03019
]
67439 (Xab2)
03041 Spliceosome [BR:
mmu03041
]
67439 (Xab2)
Messenger RNA biogenesis [BR:
mmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
67439 (Xab2)
Spliceosome [BR:
mmu03041
]
Complex B
Other components
Prp19-related factors
67439 (Xab2)
Complex C
67439 (Xab2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
TPR_2
TPR_12
TPR_8
Suf
TPR_19
TPR_15
ARM_TT21
ARM_TT21_C
TPR_MalT
TPR_1
TPR_21
TPR_16
TPR_NPHP3
Motif
Other DBs
NCBI-GeneID:
67439
NCBI-ProteinID:
NP_080432
MGI:
1914689
Ensembl:
ENSMUSG00000019470
UniProt:
Q9DCD2
LinkDB
All DBs
Position
8:complement(3660089..3671311)
Genome browser
AA seq
855 aa
AA seq
DB search
MVVMARVPRSERPDLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA
LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL
MDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESA
EEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNV
DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA
QFEESMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEW
HKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEK
ATKVNFKQVDDLASVWCQCGELELRHENYDEALKLLRKATALPARRAEYFDGSEPVQNRV
YKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKA
YERGISLFKWPNVSDIWSTYLTKFISRYGGRKLERARDLFEQALDGCPPKYAKTLYLLYA
QLEEEWGLARHAMAVYDRATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLS
DEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTI
REMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLA
AEAERDQPPRAQSKIFFVRSDASREELAELAQQANPEEIQLGEDEDEDEMDLEPNEVRLE
QQSVPAAVFGSLKED
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgatggcgcgagttccgcgttccgagcggccggaccttgtttttgaggaagag
gaccttccctatgaggaagaaatcatgaggaaccagttctccgtcaaatgctggctccgc
tacatcgagttcaaacagggggcccccaagccccgactcaaccagttgtatgagcgggca
ctcaaactgcttccctgcagctacaaactctggtaccgatatctgaaggcacgccgggca
caggtgaaacatcgctgtgtgactgatcctgcctatgaagatgtcaacaactgccatgag
agggcctttgtgttcatgcacaagatgccacgcctgtggttagactactgccagtttctc
atggaccagggaagggtaacacatacccgccgcacctttgaccgtgccctcagggcactg
cccatcacacaacactctcgcatctggcccctgtatctacgtttcctgcgctcccaccca
ctgcctgagactgctgtgcgaggctaccgtcgcttcctcaagctgagtcctgagagcgct
gaggaatacatcgagtatctcaaatccagtgaccggctagacgaggctgcacagcgcctg
gccaccgtggtgaatgatgagcgctttgtatccaaggctggtaaatccaactaccagctg
tggcacgagctgtgtgaccttatctcccagaatccggacaaggtacagtctctcaatgtg
gatgccataatccgtggtgggctcacccgtttcactgaccagctgggcaagctgtggtgc
tctttggcagactactatatccgcagtggccacttcgaaaaggctcgggatgtgtatgag
gaggccatccgcacggtgatgaccgtgcgggacttcacccaggtgttcgacagctacgcc
cagtttgaggagagcatgattgcagcgaagatggagactgcctctgaactggggcgtgag
gaggaggacgatgtggacctagagctgcgcctggcccgcttcgaacagctcatcagccga
cggcccctgcttctcaatagtgtccttctgcgccagaacccacaccacgtccacgagtgg
cacaagcgtgtagccctccatcagggccgccctcgggagattatcaacacatacacagag
gctgtgcaaacagtagaccccttcaaagccacaggcaagccccacacactgtgggttgca
ttcgccaagttttacgaagacaatggacagctggatgatgctcgtgtcatcctagagaag
gccaccaaggtgaacttcaagcaggtggatgacctggcaagtgtgtggtgccagtgtggg
gagctagagctcaggcacgagaattacgatgaggccttaaagctgctgcggaaagccacg
gctttgcctgcccgccgagctgagtactttgatggttcagaacctgtgcagaaccgtgta
tataagtcgctgaaggtgtggtccatgcttgccgacttggaggaaagcctgggcactttc
cagtcaaccaaggccgtgtatgaccgaatcctggacctgcgcatagccacgccacagatc
gttattaactatgccatgttcctggaggagcacaagtactttgaggagagcttcaaggca
tatgagcgtggcatctcactgttcaagtggcccaatgtttcagacatctggagcacctac
ctgaccaaattcatctcgcgctatgggggccgaaagctggagcgtgcacgggatctcttt
gagcaggcactcgatggctgcccaccaaaatatgccaagactttatacctgctctacgca
cagctggaggaggagtggggccttgcccgccatgccatggctgtgtatgaccgtgcgacc
agggcagtggagccagcacagcagtacgacatgtttaacatctacatcaagcgagctgct
gagatctatggcgtcacccacactcgtggcatctaccagaaggccattgaggtgctgtct
gatgagcatgcccgtgagatgtgcctgcggtttgcagacatggagtgcaagctcggtgaa
atcgaccgcgcccgggccatctacagcttctgctcccagatctgtgatccccggacaact
ggggcattctggcaaacatggaaggactttgaggttcggcacggcaatgaggataccatc
agggagatgctgaggatacggcggagtgtgcaggccacatacaatactcaggtcaacttc
atggcttcacagatgctcaaggtgtcgggcagtgccacaggcaccgtgtctgacctggct
cctgggcagagtggcatggatgacatgaagctgctggaacagagagcagaacagctggca
gctgaggcggagcgggaccagccccccagggcccagagcaagatcttctttgtgaggagt
gatgcatccagggaggaattggcagagctggctcagcaggccaaccctgaggagatccag
ctgggcgaggatgaggacgaggacgagatggacctggagcccaatgaagtccgactggaa
cagcagagtgtaccagctgctgtgttcgggagcctaaaggaagactga
DBGET
integrated database retrieval system
