Mus musculus (house mouse): 68278
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Entry
68278 CDS
T01002
Symbol
Ddx39a, 2610307C23Rik, BAT1, DDXL, Ddx39, URH49
Name
(RefSeq) DEAD box helicase 39a
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
mmu
Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmu03041
]
68278 (Ddx39a)
Enzymes [BR:
mmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
68278 (Ddx39a)
Spliceosome [BR:
mmu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
68278 (Ddx39a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
68278
NCBI-ProteinID:
NP_932099
MGI:
1915528
Ensembl:
ENSMUSG00000005481
UniProt:
Q8VDW0
LinkDB
All DBs
Position
8:84441806..84453533
Genome browser
AA seq
427 aa
AA seq
DB search
MAEQDVENELLDYDEDEEPQAPQESTPAPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVSVLVMCH
TRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEDVLKKNCPHVVVGTPGRILALVR
SRSLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCM
ALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDENDAKILNDVQDRFEVNVAELPEEIDIS
TYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcagaacaggatgtggaaaatgaacttttggattatgatgaagatgaagagccccag
gcaccccaggagagcactccagctcccccgaagaaagatgtcaaaggatcttatgtctcc
atccacagttctggcttccgggactttctactgaagccagagctcctgagagctatagtt
gactgtggctttgagcatccttcagaggtccagcatgagtgtattccccaggccattctg
ggtatggatgtcctgtgccaggccaagtctgggatgggcaagacagctgtgtttgtgctg
gccaccctgcagcagattgagcctgtcaatggccaggtatcagtcctggtcatgtgccac
acgagggagctggccttccagatcagcaaggagtatgagcgcttctctaagtacatgccc
agtgttaaggtttctgtgttctttggaggcctctccattaagaaggatgaagatgtgttg
aagaagaactgtcctcatgttgtggtggggacaccaggccggatcctggcacttgtgcgg
agcaggagcctcaacctgaggaatgtgaagcactttgtgctagatgaatgtgacaagatg
ctggaacagctggacatgcgccgggatgtacaggagatctttcgtctgacaccccacgag
aagcagtgtatgatgttcagcgccaccctgagcaaggagatccggccagtctgcaggaag
ttcatgcaggatcctatggaggtgtttgtggacgacgagaccaagctcacactgcatggg
ctgcagcagtattacgtcaagctcaaggacagtgagaagaaccgtaagctcttcgacctc
ctcgacgtgctagagtttaaccaggtggtgatctttgtcaagtctgtgcaacgctgcatg
gccctggcccagctcctagtggagcagaatttcccagctatcgctattcaccgaggcatg
gcccaggaggagcgcctgtcccgataccagcagttcaaggacttccagcgacgaatcctg
gtggctactaatctgtttggcagaggtatggacattgagcgagtcaacattgtcttcaac
tatgacatgccagaggactcagacacctaccttcaccgagtggctcgtgctggtcgcttt
ggtaccaagggcctggcagtcacttttgtatcggatgaaaatgatgccaaaatccttaat
gatgttcaggaccggtttgaagtgaatgtagctgagcttccagaggaaatagatatctcc
acatacattgagcagagccggtaa
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