Mus musculus (house mouse): 68299
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Entry
68299 CDS
T01002
Symbol
Vps53, 2010002A08Rik, 2310040I21Rik, 3100002B05Rik, Hccs1
Name
(RefSeq) VPS53 GARP complex subunit
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
mmu
Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmu04131
]
68299 (Vps53)
Membrane trafficking [BR:
mmu04131
]
Protein recycling
Others
EARP complex
68299 (Vps53)
Endosome - Golgi transport
Tethering complex
GARP complex
68299 (Vps53)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
GrpE
FBF1
Laminin_II
Sec8_N
NBD94
hAT-like_RNase-H
COG3_N
FUSC
COG5_N
Med11
HrpJ
XhlA
Motif
Other DBs
NCBI-GeneID:
68299
NCBI-ProteinID:
NP_080940
MGI:
1915549
Ensembl:
ENSMUSG00000017288
UniProt:
Q8CCB4
LinkDB
All DBs
Position
11:complement(75937052..76070464)
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AA seq
832 aa
AA seq
DB search
MMEEEELEFVEELEAVLQLTPEVQLAIEQVFPSQDPLDQADFNAVEYINTLFPTEQSLAN
IDDVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLLQG
VMNVLEHFHKYMGIPQIRQLSERVKAAQTELGQQILADFEEAFPSQGTKRPGGPSNVLRD
ACLVANILDPRIKQEIIKKFIKQHLSEYLVLFQENQDVAWLDKIDRRYAWVKRQLVDYEE
KYGRMFPREWCMTERISVEFCHVTRAELSKIMRARAKEIEVKLLLFAIQRTTNFEGFLAK
RFSGCTLTDGTLKKLESPPPSTNPFLEDETTPEMEELALEKGELEQPKKPKAPDNPFHGI
VSKCFEPHLYVYIESQDKNLSELIDRFVADFKAQGPPKPNTDEGGAVLPSCADLFVYYKK
CMVQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTSSSSGGLTISSLLKEKEGSE
VARFTLEELCLICSILSTAEYCLATTQQLEEKLKEKVDVSLTERINLTGEMDTFSTVISS
SIQLLVQDLDAACDPALIAMSKMPWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTR
KYFTQFCIKFANSFIPKFITHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRK
APASYTKIVVKGMTRAEMILKVVMAPHEPLVVFVDNYIKLLTDCNSETFQKILDMKGLKR
SEQSSMLELLRQRLPAPPSGTEGSSTLSLIAPTPEQESSRIRKLEKLIKKRL
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaggaggaactggagtttgtggaggagctggaggctgtgctgcagctcacg
ccagaggtgcaactcgccatcgagcaggtattcccaagccaggatcctcttgatcaagct
gacttcaatgccgttgagtatatcaatactctgttcccaacagagcaatctctggcaaac
attgacgatgttgtgaacaaaattagactgaaaataaggagactggatgacaatatccgg
actgtcgtaagaggtcagacaaatgtggggcaggatggaaggcaagcacttgaagaggcc
cagaaagccattcagcaactctttggcaaaatcaaggatatcaaagacaaagcagaaaag
tcagaacaaatggtgaaagagatcacccgagatattaagcagttagatcacgccaagcgc
cacctgaccacctcaatcacgaccctgaaccacctgcacatgctggcaggcggggtggac
tccctggaagccatgaccaggcgcagacagtatggagaagttgctaatctccttcagggt
gtaatgaatgttctggagcactttcacaaatacatgggaatcccacagatccgacagctt
tctgaaagggtgaaggctgcacagacagagttaggacagcaaatcctggctgactttgaa
gaagcatttccttcgcagggtaccaagaggccgggaggacccagcaatgtcctgagagat
gcgtgcctggtggctaatattttggaccccagaatcaaacaagaaatcatcaaaaagttt
attaaacagcatctatcagagtatctagtactttttcaagaaaaccaagatgtcgcctgg
ctggacaaaattgacagacgttatgcttgggtgaaacgccagcttgtggactatgaagag
aagtatggccggatgtttcctcgggagtggtgcatgacggagaggatctcagtagagttt
tgccacgtgacgagggcagaactttccaaaatcatgcgtgccagagctaaggaaattgaa
gtgaaattgcttctttttgcgatccagagaacaaccaactttgaggggtttcttgcaaaa
cgcttctccggttgcaccctgacagatggaaccctgaaaaagctggagtccccaccacca
tctaccaatcctttcctggaagatgagacaacaccagagatggaggagctggctctggag
aaaggagagttagagcaaccgaagaagcccaaggccccggacaacccgttccacggcatc
gtttccaagtgttttgagcctcatctctacgtgtacattgagtcccaggacaaaaacctc
agcgagctgatagaccggtttgtggcagatttcaaagcccagggcccacccaagcccaac
actgacgaagggggtgctgtgctccccagctgcgctgacctctttgtctactacaagaag
tgcatggtgcagtgctcacagctcagcacaggcgagcccatgatcgccctgactaccatc
ttccagaagtacctccgagaatacgcctggaaaatcctctctggcaacctgcctaaaacc
agcagcagcagtggggggctgaccatcagcagcctcctcaaagagaaggagggctcagaa
gtggccaggttcactctggaggagctgtgtctcatctgcagcatcctgagcacagccgag
tattgtctggctaccacccagcagctagaagaaaaactcaaagaaaaagttgatgtgagc
ctgactgaacgaattaatctcacaggagaaatggacacattcagcactgtcatctccagc
agcatccagctgttggttcaagatctggatgcagcctgtgaccctgccctgattgccatg
agcaagatgccttggcagaacgtggagcatgttggtgaccagagcccttatgtcacttct
gttattcttcacattaagcaaaacgtccccatcatccgtgacaacctggcttccacacgg
aaatacttcacacagttctgcattaaatttgcaaattcgttcattcccaaattcatcacc
cacctcttcaagtgtaagccgatcagcatggtgggagcagagcagcttctgctggacacc
cactccctgaagatggtcctgctcgaccttccgtccattggctcccaggtggtgaggaag
gcccctgccagttacactaagattgtcgtgaaaggcatgacccgggctgaaatgatcctt
aaggtggtgatggcccctcatgaaccgttggtggtatttgttgacaactacatcaaactc
cttacggactgcaactcagaaaccttccagaaaatactggatatgaaggggctgaagagg
agtgagcagagcagcatgctggaacttttgcggcagaggctccctgccccgccctcgggg
acagaaggttccagcaccctgtcgctgattgccccaacaccggagcaggagtcatcccga
atccgcaaactggagaaactgattaaaaagagactgtaa
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integrated database retrieval system
