KEGG   Mus musculus (house mouse): 70052
Entry
70052             CDS       T01002                                 
Symbol
Prpf4, 1600015H11Rik, bN189G18.1
Name
(RefSeq) pre-mRNA processing factor 4
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    70052 (Prpf4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mmu03041]
    70052 (Prpf4)
Spliceosome [BR:mmu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    70052 (Prpf4)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st ANAPC4_WD40 PRP4 Beta-prop_EML WD40_MABP1-WDR62_1st WDR90_beta-prop_4th NBCH_WD40 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_Vps41 WD_LRWD1 Beta-prop_IFT140_1st WD40_like Ge1_WD40 Beta-prop_WDR35_TULP_N Beta-prop_WDR11_1st
Other DBs
NCBI-GeneID: 70052
NCBI-ProteinID: NP_081573
MGI: 1917302
Ensembl: ENSMUSG00000066148
UniProt: Q9DAW6 Q059T9
LinkDB
Position
4:62327002..62345227
AA seq 521 aa
MASSRASSTTTKTKAPDDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIE
AGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITL
FGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGPNSLKVARLWI
ANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSP
NSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAA
DGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQ
EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYH
IATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPG
WSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE
NT seq 1566 nt   +upstreamnt  +downstreamnt
atggcctcctcacgagcctcctccacgacaaccaaaaccaaagcgcctgacgatttagtt
gctcccgttgtgaagaaaccacacatctactatggaagcttggaagagaaagagcgggaa
cgcctggccaaaggagagtctgggattttgggaaaagaaggactcaaagccggcattgaa
gcaggaaatattaatataacatccggagaagtgtttgaaattgaggagcacatcagtgag
cggcaggcagaagtcttggcagagtttgaaagaagaaagcgagcccggcagatcaatgtt
tccacagatgactcagaggtcaaggcttgccttcgagccttgggagagcctatcacgctt
tttggagagggccctgctgaacgaagagaaaggttaagaaatattctctcagtggtcggg
actgatgccttaaaaaagacgaaaaaagatgatgaaaagtctaagaagtcaaaggaggag
tatcagcaaacctggtaccatgaagggccaaatagcctgaaggtggccagattgtggatt
gctaattattcactccccagggcaatgaaacgcttagaggaggcccgtctccataaggag
attcctgagacaaccagaacctcccagatgcaggagctgcacaagtctctccggtctttg
aataatttctgcagtcagattggagatgaccggccgatctcctactgccacttcagcccc
aattctaaaatgctagccacagcttgttggagtgggctttgcaagctctggtctgtccct
gactgcagcctccttcacactcttcgaggccataacacaaatgtaggagcaattgtattc
catcccaaatccactgtctcgttggaccagaaggatgtcaacctggcctcttgtgctgct
gatggttctgtgaagctttggagccttgacagcgatgaaccagtggcagatattgaaggc
catacagtgcgtgtagctcgggtaatgtggcatccatcagggcgtttcctgggcacaacc
tgttatgaccgttcatggcgcttatgggatttagaggctcaagaggagatcctgcaccag
gaaggccacagcatgggtgtgtatgacattgccttccatcaagatggctctttggctggc
actgggggactggatgcatttggccgggtttgggacctacgcacaggacgctgcattatg
ttcctggaaggccacctgaaggaaatctatgggataaatttcagccccaatggctaccac
attgccactggcagtggtgacaacacctgcaaagtgtgggaccttcggcagcgacgctgt
gtctacaccatccccgcccatcagaacttagtgaccggtgtcaaatttgagcctatccat
ggggacttcttgctcacaggtgcctatgacaatacagccaagatctggacccacccaggc
tggtccccactgaagaccctggctggtcatgagggcaaagtgatgggcctggacatttct
tctgatgggcagctcatagccacgtgctcctatgacagaaccttcaagctctggatggca
gagtag

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