Mus musculus (house mouse): 70052
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Entry
70052 CDS
T01002
Symbol
Prpf4, 1600015H11Rik, bN189G18.1
Name
(RefSeq) pre-mRNA processing factor 4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
70052 (Prpf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmu03041
]
70052 (Prpf4)
Spliceosome [BR:
mmu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
70052 (Prpf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
PRP4
Beta-prop_EML
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_Vps41
WD_LRWD1
Beta-prop_IFT140_1st
WD40_like
Ge1_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
70052
NCBI-ProteinID:
NP_081573
MGI:
1917302
Ensembl:
ENSMUSG00000066148
UniProt:
Q9DAW6
Q059T9
LinkDB
All DBs
Position
4:62327002..62345227
Genome browser
AA seq
521 aa
AA seq
DB search
MASSRASSTTTKTKAPDDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIE
AGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITL
FGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGPNSLKVARLWI
ANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSP
NSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAA
DGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQ
EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYH
IATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPG
WSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcacgagcctcctccacgacaaccaaaaccaaagcgcctgacgatttagtt
gctcccgttgtgaagaaaccacacatctactatggaagcttggaagagaaagagcgggaa
cgcctggccaaaggagagtctgggattttgggaaaagaaggactcaaagccggcattgaa
gcaggaaatattaatataacatccggagaagtgtttgaaattgaggagcacatcagtgag
cggcaggcagaagtcttggcagagtttgaaagaagaaagcgagcccggcagatcaatgtt
tccacagatgactcagaggtcaaggcttgccttcgagccttgggagagcctatcacgctt
tttggagagggccctgctgaacgaagagaaaggttaagaaatattctctcagtggtcggg
actgatgccttaaaaaagacgaaaaaagatgatgaaaagtctaagaagtcaaaggaggag
tatcagcaaacctggtaccatgaagggccaaatagcctgaaggtggccagattgtggatt
gctaattattcactccccagggcaatgaaacgcttagaggaggcccgtctccataaggag
attcctgagacaaccagaacctcccagatgcaggagctgcacaagtctctccggtctttg
aataatttctgcagtcagattggagatgaccggccgatctcctactgccacttcagcccc
aattctaaaatgctagccacagcttgttggagtgggctttgcaagctctggtctgtccct
gactgcagcctccttcacactcttcgaggccataacacaaatgtaggagcaattgtattc
catcccaaatccactgtctcgttggaccagaaggatgtcaacctggcctcttgtgctgct
gatggttctgtgaagctttggagccttgacagcgatgaaccagtggcagatattgaaggc
catacagtgcgtgtagctcgggtaatgtggcatccatcagggcgtttcctgggcacaacc
tgttatgaccgttcatggcgcttatgggatttagaggctcaagaggagatcctgcaccag
gaaggccacagcatgggtgtgtatgacattgccttccatcaagatggctctttggctggc
actgggggactggatgcatttggccgggtttgggacctacgcacaggacgctgcattatg
ttcctggaaggccacctgaaggaaatctatgggataaatttcagccccaatggctaccac
attgccactggcagtggtgacaacacctgcaaagtgtgggaccttcggcagcgacgctgt
gtctacaccatccccgcccatcagaacttagtgaccggtgtcaaatttgagcctatccat
ggggacttcttgctcacaggtgcctatgacaatacagccaagatctggacccacccaggc
tggtccccactgaagaccctggctggtcatgagggcaaagtgatgggcctggacatttct
tctgatgggcagctcatagccacgtgctcctatgacagaaccttcaagctctggatggca
gagtag
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integrated database retrieval system