Mus musculus (house mouse): 70099
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Entry
70099 CDS
T01002
Symbol
Smc4, 2500002A22Rik, SMC-4, Smc4l1
Name
(RefSeq) structural maintenance of chromosomes 4
KO
K06675
structural maintenance of chromosome 4
Organism
mmu
Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mmu03036
]
70099 (Smc4)
Chromosome and associated proteins [BR:
mmu03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
70099 (Smc4)
Condensin II
70099 (Smc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_23
AAA_29
DUF192
Fez1
ATG17_like
ABC_tran
Motif
Other DBs
NCBI-GeneID:
70099
NCBI-ProteinID:
NP_598547
MGI:
1917349
Ensembl:
ENSMUSG00000034349
UniProt:
Q8CG47
Structure
PDB
PDBj
LinkDB
All DBs
Position
3:68912071..68941956
Genome browser
AA seq
1286 aa
AA seq
DB search
MRRKGTKPSTACHQEEGPPPSQDGAHSDEEMEQPAGEAESAAPAKPPGEELDNRSLEEIL
NSIPPPPPPAMASEAGAPRLMITHIVNQNFKSYAGEKVLGPFHKRFSCIIGPNGSGKSNV
IDSMLFVFGYRAQKIRSKKLSVLIHNSDEHKDIQSCTVEVHFQKIIDKEGDDYEVLPNSN
FYVSRTAYRDSTSVYHISGKKKTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMKPKG
QTEHDEGMLEYLEDIIGCGRLNEPIKVLCRRVEILNEHRGEKLNRVKMVEKEKDALEGEK
NIAIEFLTLENEMFKKKNHICQYYIYDLQNRIAEITTQKEKIHEDTKEITEKSNVLSNEM
KAKNSAVKDVEKKLNKVTKFIEQNKEKFTQLDLEDVQVREKLKHATSKAKKLEKQLQKDK
EKVEELKSVPAKSKTVINETTTRNNSLEKEREKEEKKLKEVMDSLKQETQGLQKEKEIQE
KELMGFNKSVNEARSKMEVAQSELDIYLSRHNTAVSQLSKAKEALITASETLKERKAAIK
DINTKLPQTQQELKEKEKELQKLTQEEINLKSLVHDLFQKVEEAKSSLAMNRSRGKVLDA
IIQEKKSGRIPGIYGRLGDLGAIDEKYDIAISSCCHALDYIVVDSIDTAQECVNFLKKHN
IGIATFIGLDKMTVWAKKMSKIQTPENTPRLFDLVKVKNEEIRQAFYFALRDTLVANNLD
QATRVAYQRDRRWRVVTLQGQIIEQSGTMSGGGSKVMRGRMGSSVIDEISVEEVNKMESQ
LERHSKQAMQIQEQKVQHEEAVVKLRHSERDMRNTLEKFAASIQGLSEQEEYLCVQIKEL
EANVLTTAPDRKQQKLLEENVSVFKKEYDAVAEKAGKVEAEIKRLHNTIIDINNRKLKAQ
QNKLDTINKQLDECASAITKAQVAIKTADRNLKKAQDSVCRTEKEIKDTEKEINDLKTEL
KNIEDKAEEVINNTKTAETSLPEIQKEHRNLLQELKVIQENEHALQKDALSIKLKLEQID
GHISEHNSKIKYWQKEISKIKLHPVEDNPVETVAVLSQEELEAIKNPESITNEIALLEAQ
CREMKPNLGAIAEYKKKEDLYLQRVAELDKITSERDNFRQAYEDLRKQRLNEFMAGFYVI
TNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLA
LVFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEISDRL
IGIYKTYNSTKSVAVNPKQIASKGLC
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgtaagggcaccaagccctccactgcctgccaccaggaggaagggccgccgccc
tcccaggacggtgcccacagcgacgaagagatggagcaaccggccggcgaagcggagagc
gctgcacccgcaaagcctccaggtgaggagctggataacagaagtttagaggagattttg
aatagtatccctccacccccacctccagccatggccagtgaagctggagctcctcgtctc
atgataactcatattgtaaaccaaaacttcaagtcctatgctggagagaaagttctggga
cctttccataagcgcttttcctgtattattggaccaaatggcagtggaaaatccaatgtt
attgattccatgctttttgtgtttggctatcgagcacaaaaaataaggtctaaaaagcta
tcggtactgatacataattctgatgaacacaaggatattcagagttgtactgtagaagtt
cattttcaaaagataattgataaggaaggagatgattacgaagtccttcctaacagcaac
ttctatgtatccagaaccgcctacagagatagcacttctgtctaccacataagtgggaag
aagaagacgtttaaagatgttggaaatctccttagaagccatggcattgacttagaccat
aatcgatttttaatcttgcagggtgaagttgaacagattgctatgatgaaacccaaaggc
cagactgaacatgatgaaggtatgcttgagtatttagaagatataattggctgtggacgg
ctaaatgaacctattaaagtcttgtgtcggagagttgaaatattaaatgaacacagagga
gaaaagttaaatagagtgaaaatggtagaaaaggagaaggatgcactagagggagagaaa
aacatagccattgagttccttaccctggaaaatgaaatgtttaagaaaaagaatcacatc
tgtcaatactacatttatgatctgcagaatagaattgctgaaataacgactcaaaaggaa
aaaattcatgaagatactaaagaaattactgagaagagcaatgtgctttccaatgaaatg
aaagcgaagaattcagctgtaaaggatgtagaaaagaagctcaataaagttacaaaattt
atcgaacagaataaagaaaaatttacacaactagatttggaagatgttcaagttagggaa
aaattaaaacatgctacaagtaaagccaagaaactggagaaacaacttcaaaaagataaa
gaaaaggttgaagagctgaaaagtgtacctgccaagagtaagactgtcataaatgagaca
acaactagaaacaattcgcttgagaaagaaagagagaaagaagaaaaaaaattaaaagag
gtcatggacagccttaagcaggaaacacaggggcttcagaaagaaaaggagattcaagaa
aaggaacttatgggttttaacaaatcagtaaatgaagcacgttcaaagatggaagttgct
cagtcagaacttgatatctatctcagtcgacataatacagcagtgtctcaattaagtaag
gcgaaggaagccttaattacagcttctgagactctcaaggagaggaaagctgcaatcaag
gatataaacacaaagctccctcagacgcaacaggaactaaaggagaaagaaaaagaactt
cagaaactgacacaagaagaaataaacttaaaaagtttggttcatgatcttttccaaaaa
gttgaagaagcaaagagttccttagcaatgaatcgaagtagggggaaagtacttgatgca
ataattcaagaaaaaaaatcaggcaggatcccaggaatatatggaagattgggagactta
ggagctattgatgaaaaatatgacattgctatttcatcctgttgccatgcattggactac
attgttgttgattctattgatacagcccaagaatgtgtaaacttccttaaaaagcataat
attgggattgcaactttcataggtttggataagatgacagtgtgggccaaaaaaatgagc
aaaattcaaactcctgaaaatactcctcggttatttgatctagttaaagtgaaaaatgag
gaaatccgccaagccttttactttgctttacgagataccttggtggctaacaatttggat
caagctacaagagtagcgtaccaaagagacagacgctggagagtagtgactctgcaggga
cagatcatagaacagtcaggtacaatgagtggcggtggaagcaaggtgatgagaggaagg
atgggctcttcggttatcgatgaaatctctgtagaagaggtaaataagatggaatcccag
ttggaaaggcattctaaacaagcaatgcaaatccaagaacagaaagtacaacatgaagaa
gcagtagttaagttacggcacagtgaacgagacatgagaaatacactggaaaagttcgct
gcaagcatccagggcttatcagagcaagaagagtatctgtgtgtacaaattaaagaactg
gaagctaacgttcttactacggcccctgacagaaaacaacagaaactgctggaagaaaat
gtcagtgttttcaaaaaagaatatgatgctgtggctgagaaagctggtaaagttgaagct
gagattaaacggctacacaataccatcatagatatcaacaaccgaaaactcaaggcccag
caaaacaaacttgacacgataaataagcagcttgatgaatgtgcttctgctattactaag
gcccaagtagcaatcaagactgctgacagaaatcttaaaaaggcacaggattctgtttgc
cgcacagagaaagaaataaaagacactgaaaaagaaataaatgacttaaagacagagcta
aaaaatattgaagacaaggcagaagaggtcataaacaatacaaaaactgcagagacatcc
ttaccagaaatccagaaagaacatcgtaatctacttcaggaactaaaagttattcaagaa
aatgaacatgctcttcagaaagatgcacttagtattaagttgaaacttgaacagatagat
ggccacatttctgaacataactcaaaaataaaatactggcaaaaagagatttcaaaaata
aaattgcatcctgttgaagataatcctgttgagacagtagcagttctaagccaggaggag
cttgaggcaatcaagaatccagagtctataacaaatgaaattgcacttttggaagctcag
tgtcgtgaaatgaaaccaaaccttggagccatcgctgagtataaaaaaaaggaagattta
tatttgcaaagagtagccgaactggacaaaattacttctgaaagagataattttagacaa
gcatatgaagatcttcgaaaacaaaggctgaatgaatttatggctggtttttacgtaata
acaaataaactaaaagaaaactaccagatgctcacattgggaggagatgctgaactggag
cttgtggacagtttagatcctttttctgaaggaatcatgttcagtgttcggccacctaag
aaaagttggaagaagatctttaacctctcaggaggcgagaaaacccttagttccttggcc
ttagtgtttgctcttcatcactacaagcccactcccctctacttcatggatgagattgat
gcagctctggattttaaaaatgtgtctattgttgcattttatatatatgagcaaacaaaa
aatgcccagttcataataatctctcttcgaaataatatgtttgagatttcagacagactt
attggcatctataaaacatataatagtacaaaaagtgttgcagtgaacccaaaacaaatt
gcgtctaaaggactctgttga
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