Mus musculus (house mouse): 71713
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Entry
71713 CDS
T01002
Symbol
Cdc40, 1200003H23Rik, EHB3, PRP17
Name
(RefSeq) cell division cycle 40
KO
K12816
pre-mRNA-processing factor 17
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
71713 (Cdc40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmu03041
]
71713 (Cdc40)
Spliceosome [BR:
mmu03041
]
Complex C
Other components
Step II factors
71713 (Cdc40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
EIF3I
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_NWD2_C
WD_LRWD1
WDR54
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
71713
NCBI-ProteinID:
NP_082155
MGI:
1918963
Ensembl:
ENSMUSG00000038446
UniProt:
Q9DC48
LinkDB
All DBs
Position
10:complement(40707617..40759139)
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AA seq
579 aa
AA seq
DB search
MSAAIAALAASYGSGSGSESDSDSEGSRCPLPAADSLMHLTKSPSAKLSLTVAVDSAPEV
AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHI
NDFMFEQQRRTFATYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKK
FKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEKTI
LHVKEMYDYQGRSYLHIPQDVGVNLRSSVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLS
GHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWD
TETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGA
VNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS
MDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTT
KLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgcgattgcagctctagctgcttcgtatggctcgggctcggggtccgaatcg
gattcggacagtgagggcagtcggtgtccgctgccagccgcggactctctcatgcacttg
accaaatcgccttcagccaagctctctctgaccgtggcggtggactcggctccggaggtg
gcagttaaggaagatctggagactggagttcaccttgaccctgctgtcaaagaagttcag
tataatcccacctatgagaccatgttcgctcctgagtttggaccagaaaatccctttcga
acacagcaaatggctgcccctagaaatatgctttctgggtatgcagagccagcacacatc
aatgacttcatgtttgaacagcaaagaaggacatttgctacgtacggctatgcactggac
ccttcgttagataatcatcaggtgtctgctaagtatattggctctgtggaagaagcggag
aagaaccaaggcttaactgtatttgaaactggtcagaagaaaacagaaaagaggaaaaag
ttcaaagaaaatgatgcatctaatattgatggtttcttgggaccatgggcaaaatatgtg
gatgaaaaagatgtggccaaaccttcagaagaagaacaaaaggaattggatgaaatcaca
gcaaagaggcagaaaaaaggcaaacaggaagaagagaaacctggggaggagaagacaatc
ttacatgttaaagaaatgtatgactatcaaggcaggtcctaccttcacatacctcaggat
gttggtgttaatctacggtcatctgtgccacctgaaaaatgttaccttcccaaaaaacaa
attcacgtgtggtctggacacacaaagggtgtcagcgccgtcaggctctttcctctttct
ggacatttgttgctgtcttgctccatggactgtaaaattaagctatgggaagtttatgga
gaccggcgctgtctgagaacatttattggtcacagtaaagctgtgagagacatctgcttc
aacactgcaggaacccagttcctcagtgcggcctacgacaggtaccttaaactctgggac
accgagacaggacagtgtatatcaagatttacaaaccgcaaagtaccctactgcgtcaag
ttcaatcccgatgaagataagcaaaatctctttgtggctgggatgtctgataagaagatc
gtacagtgggacatccgcagtggagagattgttcaggaatatgatcggcatctgggggct
gtcaacacgattgtttttgttgatgagaaccgaagattcgtgagtacatctgatgataaa
agcctacgagtttgggaatgggatatccctgtggattttaagtacatagcagagcccagc
atgcactcaatgcccgcagtgactttgtctccaaatgggaaatggctagcatgccagtca
atggacaaccaaatcttaatttttggagcacagaacagattcagattgaataagaagaaa
atatttaagggccacatggtagcaggctacgcttgtcaggtagacttctcaccagacatg
agctatgtgatttcaggagatggaaatgggaaattaaacatctgggactggaagaccaca
aaactctacagtcgctttaaagcccatgataaagtgtgcataggcgcagtgtggcacccc
catgagacctccaaggtcatcacgtgtggttgggacggcctcattaagttgtgggattaa
DBGET
integrated database retrieval system