Mus musculus (house mouse): 72133
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Entry
72133 CDS
T01002
Symbol
Trub1, 2610009I02Rik, 9030425C13Rik
Name
(RefSeq) TruB pseudouridine (psi) synthase family member 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mmu
Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmu03016
]
72133 (Trub1)
Enzymes [BR:
mmu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
72133 (Trub1)
Transfer RNA biogenesis [BR:
mmu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
72133 (Trub1)
Prokaryotic type
72133 (Trub1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
72133
NCBI-ProteinID:
NP_082391
MGI:
1919383
Ensembl:
ENSMUSG00000025086
UniProt:
Q8C0D0
LinkDB
All DBs
Position
19:57441323..57479437
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AA seq
338 aa
AA seq
DB search
MAAAEAEVVSPLIVDTAPDTSGTAEASVAASVAEAARTESQAPASKAALAAKLMSLSGVF
AVHKPKGPTSAELLNRLKEKLLAEAGMPSPEWNKRQKQTLKVGHGGTLDSAAQGVLVVGI
GRGTKMLTSMLSGSKRYITIGELGKATDTLDSTGKVTEEKPYDKITREDIEGILQKFTGN
IMQVPPLYSALKKDGQRLSTLMKKGKVVEARPARPVTVHSISLLKFQPPFFTLDVECGGG
FYIRSLVSDIGKELSSCASVLELTRTKQGPFTLAQHALPEDRWTIDDIEQSLERCTSLLP
EELTFKKLKSDNSSDQVISCGYITLRDTKREDDAVKTL
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgcagaggcagaggtggtttcacctctgattgtggacacagctcctgacact
tcaggaacagccgaggcctctgtagcagcatcggtggcggaagcggccaggactgaatcg
caagccccggcctccaaggccgccctggctgctaagctcatgtcgctgagcggcgtgttc
gccgtgcacaagcccaaagggcccacttcagccgagctgctgaaccggctgaaggagaag
ctgctggcagaagctggaatgccttctccagaatggaacaagaggcaaaagcagacattg
aaagtcggacacggagggacgctggacagtgcagcgcaaggtgttctggtggttgggatt
ggaagaggaacaaaaatgttgaccagtatgttgtcggggtccaagaggtatatcaccatc
ggagaactggggaaagccacggacaccctggattctactgggaaggtaacggaagagaag
ccgtatgataaaataacacgagaagatatcgaaggcattctgcagaagtttactgggaat
ataatgcaagtacccccgctctattctgcgctgaagaaggatgggcagagactctcaacg
ctaatgaagaaaggcaaggtggtggaggccagaccggcccggcccgtgactgtccacagt
atctccctcctgaagttccagcctccgttcttcacgctggatgttgaatgcggaggaggc
ttttacatccggagcctggtcagtgacatcggcaaagagctctcttcctgtgccagcgtg
ctggagctgacccgcaccaaacaggggcccttcacacttgcacagcacgccctccccgaa
gacaggtggaccatcgatgacatcgaacagtccctcgagcgctgcacgtctcttctgccg
gaggagctgacatttaaaaaactaaaatctgacaactccagtgaccaggttataagctgt
ggatatataactctcagggacacaaagagagaagatgacgcagttaagacactgtga
DBGET
integrated database retrieval system