Mus musculus (house mouse): 72587
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Entry
72587 CDS
T01002
Symbol
Pan3, 2700050F09Rik, A430027N15Rik
Name
(RefSeq) PAN3 poly(A) specific ribonuclease subunit
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
72587 (Pan3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmu03019
]
72587 (Pan3)
Messenger RNA biogenesis [BR:
mmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
72587 (Pan3)
mRNA degradation factors
3'-5' decay
Pan complex
72587 (Pan3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
zf-CCCH
Pkinase
zf_CCCH_4
zf-CCCH_4
Torus
Motif
Other DBs
NCBI-GeneID:
72587
NCBI-ProteinID:
NP_082567
MGI:
1919837
Ensembl:
ENSMUSG00000029647
UniProt:
Q640Q5
LinkDB
All DBs
Position
5:147363018..147485310
Genome browser
AA seq
837 aa
AA seq
DB search
MNSGGGGGLPPPSAAASPSSSSLAAAVAVAVAASSGVGGVPGGPAAAAGVKLKYCRYYAK
DKTCFYGEECQFLHEDPAAGAAPGLGLHSNSVPLALAAAAGAAFPPGALPGGGAGPPAGP
KKPELGVPGAATAGGGLDGPRVAIPGMDGGALTDASLTESYFSTSFIGVNGFGSPVETKY
PLMQRMTSSSSSPSLLNDSAKPYTGHDLLTSSASSLFNDFGALNISQRRKTPNPTASEFI
PKGGSTSRLSNVSQSNMSAFSQVFSHPSMGSPATAGLAPGMSLSAGSSPLHSPKITPHTS
PAPRRRSHTPNPASFMVPPSASTPANNPAPQPPSSGQVIQKETVGGTTYFYTDTTPAPLT
GMVFPNYHIYPPTAPHVAYMQPKANAPSFFMADELRQELINRHLITMAQIDQADMPAVPT
EVDSYHSLFPLEPLPPPNRIQKSSNFGYITSCYKAVNSKDDLPYCLRRIHGFRLVNTKCM
VLVDMWKKIQHSNIVTLREVFTTKAFAEPSLVFAYDFHAGGETMMSRHFNDPNSDAYFTK
RKWGQHDGPLPRQHAGLLPESLIWAYIVQLSSALRTIHTAGLACRVMDPTKILITSKTRL
RVNCVGVFDVLTFDNSQNNNPLALMAQYQQADLISLGKVVLALACNSLAGIQRENLQKAM
ELVTINYSSDLKNLILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKE
VQNGRLFRLLAKLGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSH
IISCLNKLDAGVPEKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAANGNDRNSN
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtggcggcggcggtggcctcccgccgccctcggccgctgcctcgccgtcgtcg
tcctcgctggcggcggccgtggcggtggcggtggcggcctcgtcgggcgtcgggggcgtc
cccggcgggccggcggcggcggcgggcgtgaagctcaagtactgccgctactacgccaag
gacaagacgtgcttctacggcgaggagtgtcagttcctgcacgaggacccagccgccggc
gcggccccggggcttggcctccatagcaacagcgtcccgctggcgctagcggccgcggcc
ggggccgcctttcctccgggagcgctcccgggcgggggagcggggccgcccgcggggccc
aagaagccggagctgggcgtcccgggggcggcgaccgcgggcggcggactcgatggcccg
cgggtggcgattccgggaatggatggaggtgctttaactgatgcgagtctcacagagtcc
tatttcagcaccagctttattggagtcaatggatttggaagccctgtagaaacaaagtat
cccttgatgcagagaatgactagtagtagcagctccccaagccttctaaatgacagtgcc
aagccatacacaggccacgatcttctgacttcatctgcttcatccttgtttaatgacttc
ggtgccctcaacatctcccagagaaggaagacaccaaatcctactgcaagcgaatttata
cctaaaggaggatcaacctccaggctgagtaacgtgtcccagtcaaatatgtctgccttc
tctcaagttttctctcacccatccatgggaagtcctgctactgctggattagcaccagga
atgtcactgtctgctggatcttcccctctccattcccccaaaattactccacacacctct
cctgctcctagaagaagaagccacactccaaacccagcaagtttcatggtgccgcctagt
gcctccactcctgccaataaccctgctcctcagcctccgtcctctggtcaggtgatccag
aaggagactgtcggggggacgacttacttctatacagatacaaccccagcacctttgact
ggaatggtatttccaaactatcatatttatcctccaaccgcacctcatgttgcttatatg
caaccaaaagcaaatgcaccttccttcttcatggccgacgagctccgacaggagctgatc
aacagacatttaataacgatggctcaaattgaccaagcagatatgccagcagtccccaca
gaagttgacagctaccatagcctgttccctctagaaccactgccacctcccaaccggata
cagaaatcaagtaattttggatatatcacgtcttgctacaaagctgtaaatagcaaagat
gatctgccatattgccttcggaggatacatggttttcgtcttgttaacacaaagtgcatg
gtgttggttgatatgtggaaaaaaattcagcactcaaatattgtaactctgcgtgaagtg
tttaccactaaagcatttgccgagccttctctggtgttcgcctatgatttccatgctgga
ggagaaactatgatgagcagacactttaacgacccgaattctgatgcctacttcacaaag
aggaagtggggccagcacgatggaccactgcccaggcagcatgctggattgttaccagag
tctctcatctgggcatacattgtacagctgagttctgctctgcggaccattcatacagca
ggtttggcctgtagagtaatggacccaacgaagattctgataaccagcaaaacaaggtta
cgagtaaattgtgtaggagtctttgatgttttaacatttgataacagtcaaaataataat
cctttggcattaatggctcagtaccagcaagcagatctgatatcattaggaaaagttgtg
ttggctttggcttgcaactctttggcaggaattcagcgagaaaatttacagaaagccatg
gaattggtgacaatcaactactcctctgacctgaagaacctcatcttgtacttgttgact
gaccaaaacaggatgcggagtgtgaatgacatcatgcccatgattggtgctcggttttac
actcaattggatgctgctcaaatgagaaatgatgttatcgaggaagaccttgctaaggag
gttcaaaatggaagactgtttaggcttctagcaaaattgggaacaatcaacgagaggccg
gagtttcagaaggatccaacctggtcagagactggagacagatacctgttgaaactcttt
agagatcatctttttcatcaggtgacagaagcaggtgctccctggatcgacctcagtcac
atcatttcttgtcttaacaagctagatgctggtgtgccagaaaaaatcagcctgatttcc
agagacgagaagagcgtgctggtggtgacatacagtgacctaaaacgctgctttgaaaat
acctttcaagaactgattgcggctgcaaatggtaacgatcggaacagtaactga
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