Mus musculus (house mouse): 72787
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Entry
72787 CDS
T01002
Symbol
Ndc1, 2810475A17Rik, Tmem48, sks
Name
(RefSeq) NDC1 transmembrane nucleoporin
KO
K14315
nucleoporin NDC1
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03013
Nucleocytoplasmic transport
mmu05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
72787 (Ndc1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
72787 (Ndc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmu03019
]
72787 (Ndc1)
Messenger RNA biogenesis [BR:
mmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
72787 (Ndc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
ARM_At3g06530
Motif
Other DBs
NCBI-GeneID:
72787
NCBI-ProteinID:
NP_082631
MGI:
1920037
Ensembl:
ENSMUSG00000028614
UniProt:
Q8VCB1
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All DBs
Position
4:107225244..107273543
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AA seq
673 aa
AA seq
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MATAASGPCAGGSPRDILWRVLGWRIVTSIVWSVVLLPVCITAFIVLSSINLFHPIQWLS
DSCNDFYSSQVIFHLLLLAVVIIIISIFNVEFYTVVPSISGSRLALIARILHPQQLTHSF
IHAAMGMAVAWCAAIMTKGQYSSLVVPCTGTESLDSPAAQTCLNEYHLFFLLSGAFMGYS
YSLLYFINNMNYLPFPIIQQYKFLRFRRSLLLLVKHSCVESLFMVRNFCIVYYFFGHIPK
AWISTALDLHTDEQAHRPLDTIGGLLNVSLLYHVWLCGVFLLVTWYSSWILFKIYATEAH
VFPVQPPFAEASDECLPKVLNSNPPRIVKYLALQDLMLLSQYSPSRRQEVFSLSQPGGHP
HNWTAISRECLNLLNDMTQKLVLYQEAAATNGRMYSSYSVEPKKLSSAEETAFQTPKPSQ
TPSVPPLVKTSLFSPKLSTPNVSSPFGTPFGSSVVNRMAGILDVNPFSGSPQSPQLIRRG
PRLWTHTSDQQVSAISNPSPCASVTAEGKTVRQPSVIYSWIQNKREQIKNFLSKRVLIMY
FFSKHPEASIQAVFSDAQMHIWALEGLSHLVAASFTEDRFGVVQTTLPAILHTLLTLQEA
VDKYFKLPHASSKPPRASGSLVDTSYKTLRFAFRASLKTAIYRITTTFGEHLNAVQASAE
HQKRLQQFLEFKE
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggccacggctgcgagcgggccctgcgccggcgggtcgccgcgggacatcctttggcgc
gttttgggttggaggatagttaccagcatcgtttggtcagtagtgcttctacccgtctgc
atcacagcctttatagtcttaagcagcatcaatttattccaccctatacagtggctgtca
gattcttgcaatgacttctatagttcccaagtcatctttcacctcctgctgctggccgtg
gtcattataataataagtattttcaatgtggaattctatacagttgtgccctccatatcc
ggctccagactggccctgatagcgcggatcctgcatccccagcagctcacgcactccttc
atccacgccgcgatgggaatggctgtggcttggtgtgcggccatcatgaccaagggccag
tacagctctctcgtggttccctgcactggaactgagagcttagatagccctgctgctcag
acctgcttgaatgaatatcatctgtttttcctactgtccggagcattcatgggctatagc
tatagtcttctgtatttcattaacaacatgaattatctcccgtttcctattatacagcag
tacaaatttttgcgtttccggagatctctcctcttactagttaaacatagctgtgtggaa
tccctgttcatggtcagaaatttctgcattgtgtattatttttttggccatattcccaaa
gcatggattagcactgctctggaccttcacacagatgagcaggctcacaggcctcttgac
acgataggcggtctcctgaacgtctcattactctaccacgtctggctgtgtggcgtcttc
ctcttggtgacttggtatagctcatggatactcttcaaaatctatgccaccgaggcgcat
gtgttccctgttcagccgccttttgcagaagcctcagatgaatgccttcctaaagtctta
aacagcaaccccccacgcatcgtaaagtatttggccttacaggacctgatgctgctttct
caatattctccttctcggaggcaagaagttttcagtctcagccaaccaggtggacatccc
cacaattggactgctatttcgagggagtgtttgaatcttttaaatgatatgactcagaaa
ctggttctctaccaagaagctgctgctacaaatgggaggatgtattcatcatactcagtg
gaacccaagaaactgagctctgcagaagaaactgcttttcagactccaaaacctagtcag
acgccttccgtgccgccgttagttaaaacttcactgttttctccaaaattatctacaccc
aatgtttcaagtccttttgggaccccgtttggctccagcgtagtgaaccgaatggctgga
attcttgatgtaaaccccttctctgggtctccccaaagtcctcagctcataagaagagga
ccgaggctgtggactcacacttctgatcaacaagtgtctgcaatttctaacccatctcct
tgcgcctctgttactgctgagggtaagacagtgagacagcccagtgtgatctactcgtgg
attcagaataaacgagaacagattaagaatttcttgtcaaaacgggtgctgataatgtac
tttttcagtaagcacccagaggcctccattcaggctgttttttcagatgcccaaatgcat
atttgggctttagaaggtctgtctcacttagtagcagcgtcatttacagaagatagattt
ggagttgtccagaccacactcccagctatccttcatacgctgttgactctgcaggaggct
gtcgacaagtacttcaagctgcctcatgcttctagtaaaccaccccgagcttcaggaagc
cttgtggacacgtcctacaaaacattgagatttgctttcagggcctccctgaaaaccgct
atctaccgtataaccaccacgtttggtgaacatctgaacgctgtgcaggcatctgcagaa
catcagaaaagacttcagcaattcttggagttcaaagaatag
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