Mus musculus (house mouse): 72935
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Entry
72935 CDS
T01002
Symbol
Ddx41, 2900024F02Rik, ABS
Name
(RefSeq) DEAD box helicase 41
KO
K13116
ATP-dependent RNA helicase DDX41 [EC:
5.6.2.7
]
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmu03041
]
72935 (Ddx41)
Enzymes [BR:
mmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
72935 (Ddx41)
Spliceosome [BR:
mmu03041
]
Complex C
Other components
Complex C specific factors
72935 (Ddx41)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
zf-CCHC
ResIII
Utp25_C
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
72935
NCBI-ProteinID:
NP_598820
MGI:
1920185
Ensembl:
ENSMUSG00000021494
UniProt:
Q91VN6
Q3UAC4
Q9CUY2
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All DBs
Position
13:complement(55678223..55684471)
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AA seq
622 aa
AA seq
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MEDSEPERKRARADEATAGGSRSEDEDEDDEDYVPYVPLRQRRQLLLQKLLQRRRKGATE
EEQQDSGSEPRGDEDDIPLGPQSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESV
AEGRALMSVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPI
KSFKEMKFPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVI
MFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGG
MSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRT
IFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAK
MVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFRE
GKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKAC
DESVLMDLKALLLEAKQKVPPVLQVLHCGDESMLDIGGERGCAFCGGLGHRITDCPKLEA
MQTKQVSNIGRKDYLAHSSMDF
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggaggattcggaaccggagcggaagcgggcacgcgcggacgaggcgaccgcgggtggg
agccgctccgaggacgaggatgaggacgacgaggactacgtaccctatgtgccgttgcgg
cagcgccggcagctactgctccagaagctgctgcagcgaagacgcaagggcgctacggag
gaagagcagcaggacagtggcagtgagccccgaggagatgaggacgacatcccgctgggc
cctcagtccaatgtcagcctcctggatcagcaccagcacctcaaagagaaggctgaagca
cgcaaggagtccgccaaggaaaagcaactgaaggaagaagaaaagattctggagagtgtg
gctgaaggccgagccttgatgtcagtgaaggaaatggccaaaggcatcacctatgacgat
ccaatcaaaactagttggacacccccgcgttatgtcctgagcatgtctgaggagcggcat
gagcgagttcggaagaagtatcacatcctggtggagggcgatggtatcccgccacccatc
aagagcttcaaggagatgaagtttcctgcagctatccttcggggcctgaaaaaaaagggc
atcctccacccaacacccattcagatccagggcatccctaccattctgtccggtcgggac
atgatcggcattgccttcacggggtcaggcaagacactggtattcactctgccagtcatc
atgttctgcctggaacaggagaagcggttgcctttctccaagcgagaggggccttatggg
ctcatcatctgcccctcgcgagagctggctcggcagacccacggcatcctggagtattac
tgccgtctgctgcaggaggacagctcacccctcctgcgctgtgccctctgcatcgggggc
atgtcggtgaaggagcagatggagaccatccgacatggtgtgcacatgatggtagccaca
cctggacgcctcatggatttgctgcagaagaaaatggtcagcctagacatctgccgctac
ctagccctggatgaagctgaccgcatgattgacatgggctttgagggtgacattcgtacc
atcttctcctacttcaagggccaacggcagactctgctcttcagtgccaccatgccgaag
aagattcaaaactttgccaagagtgccttggtaaagcctgtcaccatcaatgtgggtcgt
gctggagcagccagccttgatgtcatccaggaggtggagtatgtgaaggaggaagccaag
atggtgtacttgcttgagtgcctgcagaagacacccccacctgtgctcatctttgcagag
aagaaagcagatgtggatgccattcacgaatacctcctgctcaagggtgttgaggctgta
gccattcatgggggcaaagaccaggaagagcggaccaaggccattgaggcattccgggaa
ggcaagaaggacgtcttagtggccacagatgtggcctctaaaggcctggactttcctgcc
atccagcatgtcatcaactatgacatgcctgaagagatagaaaactatgtgcacagaatt
ggccgcactgggcgttcaggaaacacaggcatcgctaccaccttcatcaacaaggcctgc
gatgagtcagtgctcatggacctcaaagccttgttgctggaggccaagcagaaggtacca
cctgttctgcaagtgctgcactgtggggacgagtccatgctggacattggaggagaacgg
ggctgtgccttctgtggaggccttggccatcggatcactgactgccccaaacttgaagct
atgcagaccaagcaggtcagcaacattggccgcaaggactacctggcccacagctccatg
gacttctga
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